• Title/Summary/Keyword: 유전적 거리

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Design of Planar Microstrip Antenna at UHF ISM band for the Safety Communication of Life at Sea (해상인명 구조통신을 위한 UHF ISM 대역 평판형 마이크로스트립 안테나 설계)

  • Lee, In-Gon;Hong, Ic-Pyo
    • Journal of IKEEE
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    • v.16 no.1
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    • pp.62-68
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    • 2012
  • The planar microstrip antenna for the safety communication of life at sea is designed and manufactured to effectively receive the emergency wireless signal from the transmitter on the life vest. The proposed microstrip antenna in this paper is easy to make, light weight and cheap compared to other antennas because of printed antenna fabrication. To overcome the narrow bandwidth, large size and low gain characteristics of microstrip antenna, we use the IDMA(Identical Dual Patch Microstrip Antenna with Air-Gap) structure. The proposed antenna was fabricated with the use of 1.6mm FR4 and measured with the 28.7MHz(6.6%) of bandwidth and 3.04dBi of gain at the frequency of 426MHz. To validate the proposed antenna, we experimented the possible distance range at sea using the commercial UHF transceiver module and obtained over 5km distance for stable communication. This antenna can be widely applied to application of the UHF wireless mobile communication.

A GA-Based Algorithm for Generating a Train Speed Profile Optimizing Energy Efficiency (에너지 최적의 열차 속도 궤적 생성을 위한 GA 기반 알고리즘)

  • Kang, Moon-Ho;Han, Moon-Seob
    • Journal of the Korean Society for Railway
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    • v.12 no.6
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    • pp.878-886
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    • 2009
  • This paper proposes an optimal algorithm for generating a train speed profile giving optimal energy efficiency based on GA (Genetic Algorithm) and shows its effectiveness with simulations. After simplifying the train operation mode to a maximum traction, a coasting and a maximum breaking, adjusting the coasting point to minimize the train consuming energy is the basic scheme. Satisfying the two constraints, running distance and running time between two stations, a coasting point is determined by GA with a fitness function consisting of a target running time. Simulation results have shown that multiple coasting points could exist satisfying both of the two constraints. After figuring out consumed energies according to the multiple coasting points, an optimal train speed profile with a coasting point giving the smallest consumed energy has been selected. Simulation blocks for the train performance simulation and GA have been designed with the Simulink.

Genetic Diversity and Relationship of Ogye Population in Korea Using 25 Microsatellite Markers (MS 마커를 활용한 지역별 오계 유전자원의 다양성 및 유연관계 분석)

  • Roh, Hee-Jong;Kim, Kwan-Woo;Lee, Jin-Wook;Jeon, Da-Yeon;Kim, Seung-Chang;Jeon, Ik-Soo;Ko, Yeoung-Gyu;Lee, Jun-Heon;Kim, Sung-Hee;Baek, Jun-Jong;Oh, Dong-Yep;Han, Jae-Yong;Lee, Seung-Sook;Cho, Chang-Yeon
    • Korean Journal of Poultry Science
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    • v.45 no.3
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    • pp.229-236
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    • 2018
  • The aim of this study was to evaluate the genetic diversity and relationships of Ogye populations in Korea. A total of 243 genomic DNA samples from 6 Ogye population (Yeonsan Ogye; YSO, Animal Genetic Resources Research Center Ogye; ARO, Chungbuk Ogye; CBO, Chungnam Ogye; CNO, Gyeongbuk Ogye; GBO, Seoul National University Ogye; SUO) and 3 introduced chicken breeds (Rhode Island Red; RIR, White Leghorn; LG, Cornish; CN) were used. Sizes of 25 microsatellite markers were decided using GeneMapper Software(v 5.0) after analyzing ABI 3130XL. A total of 153 alleles were observed and the range was 2 to 10 per each locus. The mean of expected and observed heterozygosity and PIC (Polymorphism Information Content) value was 0.53, 0.50, 0.46 respectively. The lowest genetic distance (0.073) was observed between YSO and SUO, and the highest distance (0.937) between the RIR and CBO. The results of clustering analysis suggested 3 clusters (${\Delta}K=7.96$). Excluding GBO population, 5 Ogye populations (YSO, ARO, CBO, CNO, SUO) were grouped in same cluster with high genetic uniformity (0.990, 0.979, 0.989, 0.994, 0.985 respectively). But GBO population was grouped in cluster 1 with low genetic uniformity (0.340). The results of this study can be use to basic data for the genetic evaluation and management of Ogye populations in Korea.

Numerical Optimization of Foundation place for Domestic Offshore Wind Turbine by using Statistical Models for Wind Data Analysis (기상풍황자료 통계적 분석을 통한 한국형 해상풍력터빈 설치지점 선정 최적화 연구)

  • Lee, Ki-Hak;Jun, Sang-Ook;Ku, Yo-Cheon;Pak, Kyung-Hyun;Lee, Dong-Ho
    • 한국신재생에너지학회:학술대회논문집
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    • 2007.06a
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    • pp.404-408
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    • 2007
  • 현재 국내에서 운용중인 풍력발전시스템은 국내 풍력자원에 대한 정확한 정보의 부재와 국내 풍황에 맞지 않는 국외 모델을 그대로 운용하는 등의 몇 가지 문제를 드러내었다. 본 연구의 목적은 국내 연안의 해상에서 한국형 해상풍력터빈을 설치하기 위한 잠재적 최적위치와 풍황자료 산출 최적화 알고리즘을 구현하는 것이다. 최적화 알고리즘은 얕은 수심 분포와 연안에서의 거리를 제약조건으로 하고 최대 에너지밀도를 가진 지점을 구하는 것으로 정식화하였다. 풍황자료 산출을 위해서 국내 연안의 해상 풍황자료를 포함하는 기상풍황자료를 통계적 모델로 분석하여 바람지도를 작성하였다. 이 바람지도를 이용하여 지질 통계학 분야의 관측기법인 크리깅 모델을 구성하고, 전역최적화기법인 유전자알고리즘을 이용하여 제약조건을 만족하는 최대에너지밀도값과 그 위치를 도출하였다. 수치최적화 결과 우리나라 풍력 자원의 대략적인 잠재량과 현황파악이 가능하였고, 해상풍력발전단지가 조성 가능한 개략적인 위치를 예측할 수 있었다.

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A Study on the Natural Interspecific Hybrid between Rhodeus notatus and R. ocellatus (떡납줄갱이 Rhodeus notatus와 흰줄납줄개 R. ocellatus의 자연 종간잡종에 관한 연구)

  • Yun, Bong Han;Sung, Mu Sung;Kim, Yong Hwi;Bang, In-Chul
    • Korean Journal of Ichthyology
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    • v.33 no.3
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    • pp.157-166
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    • 2021
  • Three specimens, presumed to be natural hybrids between Rhodeus notatus and R. ocellatus, were collected from Onyangcheon Stream area, Jwabu-dong, Asan-si, Chungcheongnamdo, the Republic of Korea, and morphological and phylogenetic analyses were performed to clearly identify their parent species. The body color of the three natural hybrids was light greenish-brown on dorsal side, and the size of red area on the upper front of the dorsal fin and the outer margin of the anal fin generally showed intermediate characters between the parent species, R. notatus and R. ocellatus. Among the measurement and meristic characters, the ratio of prepectoral length and preanal length in the standard length, and the ratio of snout length, interorbital width, length of caudal peduncle and depth of caudal peduncle in the head length, and the number of longitudinal row scales were analyzed as the unique characters of natural hybrids. In the rag1 gene of nuclear DNA, the three natural hybrids were analyzed to be reflected all the single nucleotide polymorphism sites between R. notatus and R. ocellatus, and in the phylogenetic tree using the cytb gene of mitochondrial DNA, they formed the same genetic clade as R. notatus. Therefore, three specimens, presumed to be natural hybrids analyzed in this study were identified as interspecific hybrids between female R. notatus and male R. ocellatus.

Deciphering the Genetic Code in the RNA Tie Club: Observations on Multidisciplinary Research and a Common Research Agenda (RNA 타이 클럽의 유전암호 해독 연구: 다학제 협동연구와 공동의 연구의제에 관한 고찰)

  • Kim, Bong-kook
    • Journal of Science and Technology Studies
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    • v.17 no.1
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    • pp.71-115
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    • 2017
  • In 1953, theoretical physicist George Gamow attempted to explain the process of protein synthesis by hypothesizing that the base sequence of DNA encodes a protein's amino acid sequence and, in response, proposed the nucleic acid-protein information transfer model, which he dubbed the "diamond code." After expressing interest in discussing the daring hypothesis, contemporary biologists, including James Watson, Francis Crick, Sydney Brenner, and Gunther Stent, were soon invited to join the RNA Tie Club, an informal research group that would also count biologists and various researchers in physics, mathematics, and computer engineering among its members. In examining the club's formation, growth, and decline in multidisciplinary research on deciphering the genetic code in the 1950s, this paper first investigates whether Gamow's idiosyncratic approach could be adopted as a collaborative research forum among contemporary biologists. Second, it explores how the RNA Tie Club's research agenda could have been expanded to other relevant research topics needing multidisciplinary approach? Third, it asks why and how the RNA Tie Club dissolved in the late 1950s. In answering those questions, this paper shows that analyses on the intersymbol correlation of the overlapping code functioned to integrate diverse approaches, including sequence decoding and statistical analysis, in research on the genetic code. As those analyses reveal, the peculiar approaches of the RNA Tie Club could be regarded as a useful method for biological research. The paper also concludes that the RNA Tie Club dissolved in the late 1950s due to the disappearance of the collaborative research agenda when the overlapping code hypothesis was abandoned.

Geographic Variations and DNA Polymorphisms in Gizzard-shad (Konosirus punctatus) (전어 (Konosirus punctatus)의 지리적 변이와 DNA 다형성)

  • Park, Su-Young;Kim, Jong-Yeon;Yoon, Jong-Man
    • Korean Journal of Ichthyology
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    • v.18 no.4
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    • pp.300-310
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    • 2006
  • Genomic DNA isolated from three geographical gizzard-shad (Konosirus punctatus) populations in Seocheon (SC), Busan (BS) and Gochang (GC) collected in the West Sea and the southern sea, respectively, off the Korean Peninsula, were PCR-amplified repeatedly. Eight selected decamer and 20-mer primers generated a total of 713 loci in the SC population, 791 in the BS population, and 732 in the GC population, with a DNA fragment size ranging from 100 bp to 2,800 bp. We identified 50 unique loci for the SC population, 70 unique loci for the BS population and 130 for the GC population: 120 shared loci for the three populations. There were 108 specific loci (15.1%) for the SC population, 74 (9.4%) for the BS population, and 67 (9.2%) for the GC population. Eight primers also generated 48 polymorphic loci (6.7%) for the SC population, 26 (3.3%) for the BS population, and 16 (2.2%) for the GC population. The similarity matrix ranged from 0.756 to 0.936 for the SC population, from 0.800 to 0.938 for the BS population, and from 0.731 to 0.959 for the GC population. The dendrogram obtained by the eight primers indicates three genetic clusters: cluster 1 (SEOCHEON 01~SEOCHEON 10), cluster 2 (BUSAN 11~BUSAN 20 and GOCHANG 23~GOCHANG 24), and cluster 3 (GOCHANG 21, 22, 25, 26, 27, 28, 29 and 30). As stated above, some individuals of the GC population appear to belong in BS population. When seeing this result, it was thought with the fact that some individuals of 2 populations seem to come and go partially. Thus, RAPD-PCR analysis revealed a significant genetic distance between the three geographical gizzard-shad populations. Using various decamer and 20-mer primers, RAPD-PCR may be applied to identify specific/polymorphic markers that are particular to a species and geographic population, and to define genetic diversity, polymorphisms, and similarities among geographical gizzard-shad populations.

SSR Marker Related to Major Characteristics Affected Kernel Quality in Waxy Corn Inbred Lines (찰옥수수 자식계통의 주요 품질특성과 관련된 SSR마커)

  • Jung, Tae-Wook;Moon, Hyeon-Gui;Son, Beom-Young;Kim, Sun-Lim;Kim, Soon-Kwon
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.51 no.spc1
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    • pp.185-192
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    • 2006
  • This experiment was conducted to assess genetic diversity of waxy corn inbred lines and to identify SSR markers related to major characteristics affected kernel quality for improving waxy corn $F_1$ hybrid with good quality. Diversity of 64 waxy com inbred lines was evaluated using 30 microsatellite markers. The 30 microsatellite markers representing 30 loci in the maize genome detected polymorphisms among the 64 inbred lines and revealed 225 alleles with a mean of 7.5 alleles per primer. The polymorphism Information content (PIC) value ranged from 0.14 to 0.87, with an average of 0.69. Based on Nei's genetic distances, the 64 inbred lines were classified into 9 groups by the cluster analysis. The group I included 26 inbred lines (41%), other groups included 3 to 9 inbred lines. One-way analysis of variance was conducted to identify significant relationship between individual markers and major characteristics that affect kernel quality. The analysis showed that umc1019 was related to amylopectin and crude protein content, me 1020 to amylopectin content and peak viscosity, and bnlg1537 to 100-kernel weight, kernel length, and kernel width.

Changes in Genetic Diversity of a Test Plantation of Liriodendron tulipifera L. by simulated Practices for Seed Trees (백합나무 시험림(試驗林)의 모의간벌(模擬間伐)에 따른 유전다양성(遺傳多樣性) 변화(變化))

  • Hong, Yong-Pyo;Ryu, Keun-Ok;Cho, Kyung-Jin;Hong, Kyung-Nak
    • Journal of Korean Society of Forest Science
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    • v.90 no.1
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    • pp.155-160
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    • 2001
  • Changes in genetic diversity after seed-tree practice were simulated in test plantation of tulip tree at Sokdal-ri, Banwol-myon, Hwasung-gun, Kyungki Provence. I-SSR markers were analyzed in a total of 305 tulip trees. A total of 89 amplicon variants were observed by PCR with 9 I-SSR primers. Genetic diversity for 305 trees was relatively high (S. I. =0.4532). Individuals originated from the seed orchards in U.S.A. showed the highest level of genetic diversity (0.4530), those from Anyang showed the medium level (0.4152), and those from Cheonbuk showed the lowest (0.3929). Simulation of seed-tree practice accompanied by 2 consecutive thinnings was performed on the basis of morphological characteristics and planted distances of the individual trees, which left 37 trees as candidates for seed-trees. Decreasing rate of genetic diversity within seed sources was greatest for individuals from Cheonbuk (28.3%), moderate for those from Anyang (16.3%), and smallest for those from U.S.A. (8.0%). In spite of little difference in decreasing rate of individuals for the 3 seed sources (87.5~88.2%), large difference in decreasing rate of genetic diversity within seed sources might be due to difference in number of mother trees for the 3 seed sources. For example, whereas individuals originated from the seed orchard in U.S.A., which showed the smallest decreasing rate of genetic diversity, might be originated from relatively large number of mother trees, those from Anyang and Cheonbuk might be originated from relatively small number of mother trees. Although mean of 17.5% of the genetic diversity within seed sources was decreased through 2 consecutive thinnings, a decrease in genetic diversity for the whole individuals (37 trees) was only 6.1%. This observation suggests that the seed-tree practice on the basis of the criteria established in the present study may not result in great reduction in overall genetic diversity of the progenies.

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Cloning, cSNP Identification, and Genotyping of Pig Complement Factor B(CFB) Gene Located on the SLA Class III Region (SLA Class III 영역의 돼지 Complement Factor B(CFB) 유전자의 Cloning, cSNP 동정 및 유전자형 분석)

  • Kim, Jae-Hwan;Lim, Hyun-Tae;Seo, Bo-Yeong;Zhong, Tao;Yoo, Chae-Kyoung;Jung, Eun-Ji;Jeon, Jin-Tae
    • Journal of Animal Science and Technology
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    • v.50 no.6
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    • pp.753-762
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    • 2008
  • The primers for RT-PCR and RACE-PCR were designed by aligning the pig genomic sequence and the human complement factor B(CFB) coding sequence(CDS) from the GenBank. Each PCR product was amplified in pig cDNA and sequencing was carried out. The CDS length of pig CFB gene was determined to be 2298 bp. In addition, the pig CDS was more longer than human and mouse orthologs because of insertion and deletion. The identities of porcine nucleotide sequences with those of human and mice were 84% and 80%, and the identities of amino acids were 79% to 77%, respectively. Three complement control protein(CCP) domains, one Von Willebrand factor A(VWFA) domain and a serine protease domain, that are revealed typically in mammals, were found in the pig CFB gene. Based on the CDSs determined, the primers were designed in intron regions for amplification of entire length of exons. In amplification and direct sequencing with genomic DNAs of six pig breeds, three cSNPs(coding single nucleotide polymorphisms) were identified and verified as missense mutations. Using the Multiplex-ARMS method, we genotyped and verified the mutations identified from direct sequencing. To demonstrate recrudescence, we performed both direct sequencing and Multiplex-ARMS with two randomly selected DNA samples. The genotype of each sample exhibited the same results using both methods. Therefore, three cSNPs were identified from pig CFB gene and that can be used for haplotype analysis of the swine leukocyte antigen(SLA) class III region. Moreover, the results indicate that the Multiplex-ARMS method should be powerful for genotyping of genes in the SLA region.