• Title/Summary/Keyword: 시퀀스 분석기

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Performance Comparison of Digital Hologram Compressive Encodings Using High Efficient 2D Video Compression Techniques (고성능 2D 비디오 압축 기술을 이용한 디지털 홀로그램 압축부호화의 성능비교)

  • Kang, Iseul;Lee, Yoonhyuk;Seo, Youngho;Kim, Dongwook
    • Proceedings of the Korean Society of Broadcast Engineers Conference
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    • 2015.11a
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    • pp.77-80
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    • 2015
  • 본 논문에서는 디지털 홀로그램(digital hologram)을 2 차원 비디오 압축기를 사용하여 압축하는 방법을 다룬다. 그 방법은 디지털 홀로그램을 다수 개의 부홀로그램(sub-hologram)으로 나누고, 각 부홀로그램을 2 차원영상화한 후 그 결과를 배열하여 동영상 시퀀스로 만들어 2 차원 동영상 압축기로 압축하는 방법이다. 각 부홀로그램을 2 차원 영상으로 만드는 방법으로 DCT(Discrete Cosine Transform)와 Fresnel 변환 변환(Fresnel Transform)을 사용하며, 다양한 크기의 부홀로그램을 고려한다. 2 차원 비디오 압축 방법으로는 H.264/AVC 와 HEVC 를 사용한다. 본 논문에서는 2 차원 영상 변환 방법, 부홀로그램의 크기, 그리고 2 차원 영상압축 방법에 따른 성능을 비교하고 분석한다.

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Performance Analysis of OFDM Timing Synchronization Method with Imperfect Noise Estimation (불완전한 잡음 예측하에서 OFDM 시간 동기화 기법의 성능 분석)

  • Lee, Ki-Chang;Yoon, Young-Joong
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.32 no.3C
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    • pp.189-194
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    • 2007
  • This paper derives and computes the detection probability of timing synchronization in an orthogonal frequency division multiplexing (OFDM) system encountered with a multipath Rayleigh fading channel and imperfect noise estimation. The timing synchronization scheme using a simple repeated constant amplitude zero auto-correlation (CAZAC) training symbol and correlation techniques is adopted. With this provision, we focus on the numerical analysis for OFDM timing synchronization scheme employing a preadvancement technique to reduce the inter-symbol interference (ISI). For measuring system performance, the detection performance derived in the considered system is presented in a multipath Rayleigh fading channel.

Design and Performance Analysis of sliding correlator digital DS-SS Transceiver (슬라이딩 상관기를 적용한 디지털 직접대역확산 송수신기의 설계 및 성능분석)

  • Kim, Seong-Cheol;Jin, Go-Whan
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.16 no.9
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    • pp.1884-1891
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    • 2012
  • In this paper, we design the sliding correlator SS transceiver which supports short message service. We also analyze the PN code acquisition circuit that is essential for spread spectrum receiver. Using Maxplus II tool provided by altera Co., Ltd, we have designed PN code generator, and sliding correlator for PN code acquisition. Then, they have been made into FPGA by way of EPM7064SLC44-10 - a chip of Altera Co., Ltd. Additionally, we have designed delay clock circuit which is faster than the clock of Tx PN clock, designed switching circuit to control the clock rate and data demodulation circuit. The performance of the transceiver is evaluated from the experimental results. Especially, the performance of PN code acquisition accomplished by sliding correlator which is very important to evaluate spread spectrum receiver is evaluated with the comparison of the lock states.

Long-Life Performance Test & Evaluation for Hydrazine Decomposition Catalyst (하이드라진 분해촉매 장기성능시험 및 평가)

  • Kim, In-Tae;Kim, Jung-Hun;Lee, Jae-Won;Jang, Ki-Won;Yu, Myoung-Jong;Kim, Su-Kyum;Lee, Kyun-Ho
    • Proceedings of the Korean Society of Propulsion Engineers Conference
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    • 2007.04a
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    • pp.110-113
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    • 2007
  • For the development of hydrazine decomposition catalyst, Hot-fire test to verify performance of catalyst is required. The purpose of a long-life firing test is to demonstrate the capability of a design to perform for the maximum duration or cycles of operation. This paper describes the progress of the catalyst performance test, explains the test matrix, and presents the test results.

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A CNV detection algorithm based on statistical analysis of the aligned reads (정렬된 리드의 통계적 분석을 기반으로 하는 CNV 검색 알고리즘)

  • Hong, Sang-Kyoon;Hong, Dong-Wan;Yoon, Jee-Hee;Kim, Baek-Sop;Park, Sang-Hyun
    • The KIPS Transactions:PartD
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    • v.16D no.5
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    • pp.661-672
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    • 2009
  • Recently it was found that various genetic structural variations such as CNV(copy number variation) exist in the human genome, and these variations are closely related with disease susceptibility, reaction to treatment, and genetic characteristics. In this paper we propose a new CNV detection algorithm using millions of short DNA sequences generated by giga-sequencing technology. Our method maps the DNA sequences onto the reference sequence, and obtains the occurrence frequency of each read in the reference sequence. And then it detects the statistically significant regions which are longer than 1Kbp as the candidate CNV regions by analyzing the distribution of the occurrence frequency. To select a proper read alignment method, several methods are employed in our algorithm, and the performances are compared. To verify the superiority of our approach, we performed extensive experiments. The result of simulation experiments (using a reference sequence, build 35 of NCBI) revealed that our approach successfully finds all the CNV regions that have various shapes and arbitrary length (small, intermediate, or large size).

Sequence Stratigraphy of the Yeongweol Group (Cambrian-Ordovician), Taebaeksan Basin, Korea: Paleogeographic Implications (전기고생대 태백산분지 영월층군의 순차층서 연구를 통한 고지리적 추론)

  • Kwon, Y.K.
    • Economic and Environmental Geology
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    • v.45 no.3
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    • pp.317-333
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    • 2012
  • The Yeongweol Group is a Lower Paleozoic mixed carbonate-siliciclastic sequence in the Taebaeksan Basin of Korea, and consists of five lithologic formations: Sambangsan, Machari, Wagok, Mungok, and Yeongheung in ascending order. Sequence stratigraphic interpretation of the group indicates that initial flooding in the Yeongweol area of the Taebaeksan Basin resulted in basal siliciclastic-dominated sequences of the Sambangsan Formation during the Middle Cambrian. The accelerated sea-level rise in the late Middle to early Late Cambrian generated a mixed carbonate-siliciclastic slope or deep ramp sequence of shale, grainstone and breccia intercalations, representing the lower part of the Machari Formation. The continued rise of sea level in the Late Cambrian made substantial accommodation space and activated subtidal carbonate factory, forming carbonate-dominated subtidal platform sequence in the middle and upper parts of the Machari Formation. The overlying Wagok Formation might originally be a ramp carbonate sequence of subtidal ribbon carbonates and marls with conglomerates, deposited during the normal rise of relative sea level in the late Late Cambrian. The formation was affected by unstable dolomitization shortly after the deposition during the relative sea-level fall in the latest Cambrian or earliest Ordovician. Subsequently, it was extensively dolomitized under the deep burial diagenetic condition. During the Early Ordovician (Tremadocian), global transgression (viz. Sauk) was continued, and subtidal ramp deposition was sustained in the Yeongweol platform, forming the Mungok Formation. The formation is overlain by the peritidal carbonates of the Yeongheung Formation, and is stacked by cyclic sedimentation during the Early to Middle Ordovician (Arenigian to Caradocian). The lithologic change from subtidal ramp to peritidal facies is preserved at the uppermost part of the Mungok Formation. The transition between Sauk and Tippecanoe sequences is recognized within the middle part of the Yeongheung Formation as a minimum accommodation zone. The global eustatic fall in the earliest Middle Ordovician and the ensuing rise of relative sea level during the Darrwillian to Caradocian produced broadly-prograding peritidal carbonates of shallowing-upward cyclic successions within the Yeongheung Formation. The reconstructed relative sea-level curve of the Yeongweol platform is very similar to that of the Taebaek platform. This reveals that the Yeongweol platform experienced same tectonic movements with the Taebaek platform, and consequently that both platform sequences might be located in a body or somewhere separately in the margin of the North China platform. The significant differences in lithologic and stratigraphic successions imply that the Yeongweol platform was much far from the Taebaek platform and not associated with the Taebaek platform as a single depositional system. The Yeongweol platform was probably located in relatively open shallow marine environments, whereas the Taebaek platform was a part of the restricted embayments. During the late Paleozoic to early Mesozoic amalgamations of the Korean massifs, the Yeongweol platform was probably pushed against the Taebaek platform by the complex movement, forming fragmented platform sequences of the Taebaeksan Basin.

Analysis of Polymer Characteristics Using Matrix-assisted Laser Desorption/Ionization Time-of-flight Mass Spectrometry (말디토프 질량분석을 이용한 고분자의 특성분석)

  • Kang, Min-Jung;Seong, Yunseo;Kim, Moon-Ju;Kim, Myung Soo;Pyun, Jae-Chul
    • Applied Chemistry for Engineering
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    • v.28 no.3
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    • pp.263-271
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    • 2017
  • The application of mass spectrometry to polymer science has rapidly increased since the development of MALDI-TOF MS. This review summarizes current polymer analysis methods using MALDI-TOF MS, which has been extensively applied to analyze the average molecular weight of biopolymers and synthetic polymers. Polymer sequences have also been analyzed to reveal the structures and composition of monomers. In addition, the analysis of unknown end-groups and the determination of polymer concentrations are very important applications. Hyphenated techniques using MALDI-tandem MS have been used for the analysis of fragmentation patterns and end-groups, and also the combination of SEC and MALDI-TOF MS techniques is recommended for the analysis of complex polymers. Moreover, MALDI-TOF MS has been utilized for the observation of polymer degradation. Ion mobility MS, TOF-SIMS, and MALDI-TOF-imaging are also emerging technologies for polymer characterization because of their ability to automatically fractionate and localize polymer samples. The determination of polymer characteristics and their relation to the material properties is one of the most important demands for polymer scientists; the development of software and instrument for higher molecular mass range (> 100 kD) will increase the applications of MALDI-TOF MS for polymer scientists.

CNVDAT: A Copy Number Variation Detection and Analysis Tool for Next-generation Sequencing Data (CNVDAT : 차세대 시퀀싱 데이터를 위한 유전체 단위 반복 변이 검출 및 분석 도구)

  • Kang, Inho;Kong, Jinhwa;Shin, JaeMoon;Lee, UnJoo;Yoon, Jeehee
    • Journal of KIISE:Databases
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    • v.41 no.4
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    • pp.249-255
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    • 2014
  • Copy number variations(CNVs) are a recently recognized class of human structural variations and are associated with a variety of human diseases, including cancer. To find important cancer genes, researchers identify novel CNVs in patients with a particular cancer and analyze large amounts of genomic and clinical data. We present a tool called CNVDAT which is able to detect CNVs from NGS data and systematically analyze the genomic and clinical data associated with variations. CNVDAT consists of two modules, CNV Detection Engine and Sequence Analyser. CNV Detection Engine extracts CNVs by using the multi-resolution system of scale-space filtering, enabling the detection of the types and the exact locations of CNVs of all sizes even when the coverage level of read data is low. Sequence Analyser is a user-friendly program to view and compare variation regions between tumor and matched normal samples. It also provides a complete analysis function of refGene and OMIM data and makes it possible to discover CNV-gene-phenotype relationships. CNVDAT source code is freely available from http://dblab.hallym.ac.kr/CNVDAT/.

Implementation of Analyzer of the Alert Data using Data Mining (데이타마이닝 기법을 이용한 경보데이타 분석기 구현)

  • 신문선;김은희;문호성;류근호;김기영
    • Journal of KIISE:Databases
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    • v.31 no.1
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    • pp.1-12
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    • 2004
  • As network systems are developed rapidly and network architectures are more complex than before, it needs to use PBNM(Policy-Based Network Management) in network system. Generally, architecture of the PBNM consists of two hierarchical layers: management layer and enforcement layer. A security policy server in the management layer should be able to generate new policy, delete, update the existing policy and decide the policy when security policy is requested. And the security policy server should be able to analyze and manage the alert messages received from Policy enforcement system in the enforcement layer for the available information. In this paper, we propose an alert analyzer using data mining. First, in the framework of the policy-based network security management, we design and implement an alert analyzes that analyzes alert data stored in DBMS. The alert analyzer is a helpful system to manage the fault users or hosts. Second, we implement a data mining system for analyzing alert data. The implemented mining system can support alert analyzer and the high level analyzer efficiently for the security policy management. Finally, the proposed system is evaluated with performance parameter, and is able to find out new alert sequences and similar alert patterns.

The extraction of high-quality frame from video for 3D reconstruction (3 차원 복원을 위한 비디오에서 고품질 프레임 추출)

  • Choi, Jongho;Yoo, Jisang
    • Proceedings of the Korean Society of Broadcast Engineers Conference
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    • 2017.06a
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    • pp.9-11
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    • 2017
  • 비디오 시퀀스에서 3D 모델을 복원하기 위해서는 기하 모델 추정이 용이한 프레임을 선택해야 한다. 본 논문에서는 안정 장치 도움을 받는 전문 비디오가 아닌 일반 비디오에서 고품질의 프레임을 손쉽게 자동 추출하는 방법을 제안한다. 제안하는 기법은 optical flow 기반 매칭 분석, 프레임 간 적당한 기준선 거리 판단, 비디오 내에서 빠른 탐색을 위한 고속 도약, 두 프레임 간의 호모그래피와 기본 행렬에 대한 GRIC 점수, 모션 블러 프레임 제거 방법 모두를 결합한다. 실내 공간에 촬영된 비디오를 이용한 실험을 통해, 우리의 방법이 모션 블러와 저하 움직임이 있는 상황에서 더 강건하게 3D point cloud 를 생성하는 것을 보여준다.

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