• Proceedings of the Plant Resources Society of Korea Conference
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• 2022.09a
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• pp.72-72
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• 2022

자두나무(Prunus salicina Lindl.)는 세계에서 5번째로 많이 생산되는 과실로, 한국에서 재배하는 자두나무의 기본종은 중국 양쯔강 유역에서 기원했다. 2016년 과수용 자두나무와는 다른 자두나무가 양구에서 발견되었다. 양구군, 인제군, 고성군 일대의 자두나무 개체군의 유전다양성 및 집단 구조 분석을 통해 본 자두나무 개체군의 유전다양성 및 개체군 구조를 확인하고자 했다. 과수용 재배종을 포함한 시료를 채취하여 GBS 분석을 진행했고 주성분 분석과 STRUCTURE 분석을 통해 개체군간 유전적 구조를 확인했다. 재배종의 유전형이 다른 개체군에서도 나타나는 것으로 보아 유의한 유전적 분화가 일어났다고 보기 힘들었다. 하지만 고성군 고진동계곡 등 DMZ에 인접한 집단이 분계도에서 재배종 개체군과 가장 유전적 거리가 있는 것으로 나타났다. 하지만 본 분석으로는 야생집단으로 발견도니 자두나무의 실체와 기원을 단정짓기에는 부족한 것으로 보이며 외군 추가 및 더 많은 시료를 확보하는 등 추가 조사와 분석이 필요하다.

• Korean Journal of Environment and Ecology
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• v.25 no.4
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• pp.470-478
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• 2011

Aster altaicus var. uchiyamae is on the list of endangered species in Korea. Using amplified fragment length polymorphism (AFLP) markers, we investigated the genetic diversity within and among four populations (Guram, Dori Island, Samhap, and Danyang) of A. altaicus var. uchiyamae. We also present the collecting strategies that most efficiently capture the genetic diversity of A. altaicus var. uchiyamae. Four AFLP primer combinations produced a total of 936 bands, of which 934 (99.8%) were polymorphic. A high level of genetic diversity (PPB = 45.3%, h = 0.104, I = 0.168, hs = 0.108) was recognized within the populations of A. altaicus var. uchiyamae. A low degree of genetic differentiation ($G_{ST}$ = 0.075, ${\theta}^B$ = 0.079) was detected among the populations. In addition, analysis of molecular variance (AMOVA) showed that genetic variation was greater within populations (91%) than among populations (9%). These results indicate that the high rate of gene flow has played an important role in forming the present populations of A. altaicus var. uchiyamae. According to maximization strategy, 17, 16, and 11 individuals captured all of the genetic variation in Dori Island, Samhap, and Guram population, respectively. The determination the minimum population size of A. altaicus var. uchiyamae in terms of the genetic information is critical and thereby gain reliable decision support for ex situ conservation of the endangered species, A. altaicus var. uchiyamae.

• Journal of the Korean Institute of Intelligent Systems
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• v.11 no.2
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• pp.95-100
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• 2001

비선형 시스템의 성공적인 퍼지 모델을 구성하기 위한 최적의 퍼지 추론 시스템의 동정은 중요하고도 어려운 문제이다. 전통적으로 유전 알고리즘은 어느 정도의 전역 최적해를 찾을 수 있기 때문에 퍼지 모델의 구조와 파라미터를 동정하는데 사용되어 왔다. 그러나, 유전 알고리즘은 개체군 진화 시 우수한 개체의 출현은 지역수렴의 원인이 된다. 따라서, 본 논문에서는 바이러스 메시 유전알고리즘을 이용한 효과적인 퍼지 모델링 방법을 제안한다. 제안된 방법은 지역 정보가 개체군 내에서 교환됨으로써 지역 수렴의 대인아 될 수 있을 뿐 아니라, 가변길이 스트링을 사용함으로써 좀더 효과적이고 적응적인 구조를 가질 수 있다. 또한 본 논문에서 제안한 방법의 우수성과 일반성을 증명하기 위해 복잡한 비선형 시스템과 가스로의 퍼지모델링에 적용하였다.

• Korean Journal of Ichthyology
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• v.32 no.2
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• pp.39-48
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• 2020

The slender shinner (Pseudopungtungia tenuicorpa), a tiny freshwater fish of about 8 to 10 cm belonging to Cyprinidae, is an endangered species found only in the Han and Imjin Rivers on the Korean Peninsula. During the breeding season, this species spawns in nests of Coreoperca herzi, a predator of this species, or small crevices on rocks. This unique reproductive ecology can make this species more vulnerable to anthropogenic perturbance that can further limit the places to spawn. Here, mtDNA and microsatellite loci were analyzed to identify the genetic diversity and structure of slender shinners and further to provide the basic data necessary for the conservation planning of this species. A total of 28 polymorphic microsatellite markers were developed using Illumina paired-end sequencing, and 67 slender shinners collected from three localities in the Han River were genotyped using these loci. This species showed a remarkably high level of genetic diversity with mean expected heterozygosity of 0.914 and mean allele number per locus of 27.9, and no signature of drastic demographic decline was detected. As a result of our microsatellite analysis, the genetic structure between the two stems of the Han River, North Han and South Han, was prominent. Such a genetic structure was also evident in the sequence analysis of 14 haplotypes obtained from mtDNA control region. Although slender shinners are only found in very limited areas around the world, the genetic structure indicates that there is a block of gene flow among the populations, which should be reviewed in the future if management and restoration of this species is needed.

• Korean Journal of Ornithology
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• v.25 no.2
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• pp.106-111
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• 2018

The Black-tailed gull (Larus crassirostris) is one of the most common gull species in the Northeast Asia and classified as LC (least concern) in the IUCN Red List. The bird has become a useful indicator for marine environmental pollution and habitat disruption, since the human activities impacted marine environments. Here we show that the black-tailed Gull has 6 haplotypes and some rare haplotypes are locally limited implying that the bird may not disperse far. This study may be the first report on population genetic study of Black-tailed Gull in Korea and could be used as the baseline data for monitoring and genetic study on the bird as an environmental indicator.

• Journal of the Korean Institute of Intelligent Systems
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• v.10 no.5
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• pp.432-441
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• 2000

This paper deals with the fuzzy modeling for the complex and uncertain nonlinear systems, in which conventional and mathematical models may fail to give satisfactory results. Genetic algorithm has been used to identifY parameters and structure of fuzzy model because it has the ability to search optimal solution somewhat globally. The genetic algorithm, however, has a problem, which optimization process can be premature convergence in the case of lack of genetic divergence of population. Virus- evolutionary genetic algorithm(VEGA) could be a strategy against this local convergence. Therefore, we use VEGA for fuzzy modeling. In this method, local information is exchanged in population so that population can sustain genetic divergence. finally, to prove the theoretical hypothesis, we provide numerical examples to evaluate the feasibility and generality of fuzzy modeling using VEGA.

• Korean Journal of Environmental Biology
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• v.40 no.4
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• pp.525-549
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• 2022

The process of biological invasion is led by the dynamics of a population as a demographic and evolutionary unit. Spatial structure can affect the population dynamics, and it is worth being considered in research on biological invasion which is always accompanied by dispersal. Metapopulation theory is a representative approach to spatially structured populations, which is chiefly applied in the field of ecology and evolutionary biology despite the controversy about its definition. In this study, metapopulation was considered as a spatially structured population that includes at least one subpopulation with significant extinction probability. The early phase of the invasion is suitable to be analyzed in aspects of the metapopulation concept because the introduced population usually has a high extinction probability, and their ecological·genetic traits determining the invasiveness can be affected by the metapopulation structure. Although it is important in the explanation of the prediction of the invasion probability, the metapopulation concept is rarely used in ecological research about biological invasion in Korea. It is expected that applying the metapopulation theory can supply a more detailed investigation of the invasion process at the population level, which is relatively inadequate in Korea. In this study, a framework dividing the invasive metapopulation into long- and middle-distance scales by the relative distance of movement to the natural dispersal range of species is proposed to easily analyze the effect of a metapopulation in real cases. Increased understanding of the mechanisms underlying invasions and improved prediction of future invasion risk are expected with the metapopulation concept and this framework.

• Proceedings of the Korean Institute of Intelligent Systems Conference
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• 2000.05a
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• pp.35-38
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• 2000

본 논문에서는 퍼지 제어기의 설계를 위한 다중 돌연변이 연산자를 갖는 Niche Meta 유전 알고리즘을 제안한다. 제안된 알고리즘에서 유전자는 유전 알고리즘에 사용되는 교배율이나 돌연변이율과 같은 구조 매개변수와 퍼지 제어기의 입, 출력 소속함수를 나타내는 매개변수로 구성된다. 제안된 알고리즘은 부개체군들에 대해 퍼지 제어기의 소속함수의 매개변수를 최적화시키는 지역적 탐색을 수행하면서 전체 개체군에 대해서 최적의 구조 매개변수에 대한 전역적인 탐색을 수행한다. 다중 돌연변이 연산자는 지역적 진화의 결과에 따라 진화에 가장 적합한 돌연변이 방법으로 선택된다. 제안된 알고리즘의 효율성을 입증하기 위해 2 자유도를 구륜이동 로봇에 대한 모의 실험을 수행한다.

• Korean Journal of Environment and Ecology
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• v.31 no.6
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• pp.520-528
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• 2017

The exotic black soldier fly, Hermetia illucens, has been paid much attention as an excellent organic matter decomposer. We conducted the nationwide survey and the population genetic study using a mitochondrial cytochrome C oxidase 1 gene to understand its genetic diversity and distribution pattern in Korea. The results show that it has successfully settled down in South Korea and there are only 10 haplotypes and the populations of the insect are highly differentiated. The results may indicate that their dispersal was restrained probably due to their short distance flying tendency since their introduction and settlement of only few maternal lineages with certain genotypes in Korea.

• Korean Journal of Environment and Ecology
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• v.33 no.4
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• pp.422-439
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• 2019

The rear edge population is considered to have low genetic diversity and high risk of extinction according to a highly isolated distribution. However, the rear edge population is observed to have persisted for an extended period despite the low genetic diversity. As such, it is necessary to understand the ecological process involved in the persistence of the population. Viola mirabilis L. in Korea is considered the rear edge population from the perspective of the worldwide distribution. We surveyed the distribution range of V. mirabilis, which shows the isolated distribution in the central area of Korea, to find out the factors of its persistence. Next, we investigated and accessed the vegetational pattern of habitats, soil environment, phenology, self-compatibility, population structure, and extinction risk factors observed in the distribution area. V. mirabilis was distributed in the understory of the deciduous forest, planted forest of the deciduous conifer and deciduous broad-leaved trees, shrubland, and grassland in the limestone area. We also observed the re-establishment of seedlings in the population, and most of them showed a stable population structure. For chasmogamous flowers, the visit by pollinators has a significantly positive relationship with the production of fruits. However, we found that the production of the cleistogamous flowers was more numerous in all studied populations and that only the cleistogamous flowers were produced despite a more substantial plant size in some populations. The plant size was more related to the production of the cleistogamous flowers than that of the chasmogamous flowers. Accordingly, the cleistogamous flowers significantly contributed to seedling recruitment in the population. We found that the production of the chasmogamous flowers and the cleistogamous flowers did not have a correlation with the factors of the soil analysis except for phosphoric acid. V. mirabilis showed the self-incompatibility characteristics most likely due to the production capability of the cleistogamous flowers. Potential extinction risk factors observed in the distribution area was included the development of limestone mine, the expansion of agricultural fields, and the construction of houses. Although V. mirabilis showed an isolated distribution in the limestone area in the Korean peninsula, it showed a diverse distribution in a wide habitat environment ranging from the grassland to the understory of the trees with relatively low canopy closure rate. Moreover, we concluded that the persistence of the population was possible if we can maintain the current state of multiple populations and stable population structure.