Cloning and Characterization of Mannanase Gene from Bacillus subtilis WL-8

Bacillus subtilis WL-8의 Mannanase 유전자 클로닝과 특성분석

  • Yoon, Ki-Hong (Department of Food Science & Biotechnology, Woosong University)
  • 윤기홍 (우송대학교 식품생물과학과)
  • Received : 2010.05.10
  • Accepted : 2010.06.09
  • Published : 2010.06.30

Abstract

A bacterium producing the extracellular mannanase was isolated from Korean soybean paste. The isolate WL-8 has been identified as Bacillus subtilis on the basis on its 16S rRNA sequence, morphology and biochemical properties. The mannanase productivity of strain WL-8 was increased in LB broth by addition of wheat bran. The maximum mannanase productivity was reached to approximately 20 U/ml in LB medium supplemented with 6% wheat bran. A gene encoding the mannanase of WL-8 was cloned into Escherichia coli and its nucleotide sequence was subsequently determined. The mannanase gene consisted of 1,086 nucleotides encoding a polypeptide of 362 amino acid residues. The deduced amino acid sequence was highly homologous with those of several mannanases from B. subtilis belonging to GH family 26. Reaction temperature and pH profiles were investigated using the culture filtrate and cell-free extract of the recombinant E. coli carrying a WL-8 mannanase gene, respectively. Optimal conditions for the two fractions occurred at pH 5.5 and $60^{\circ}C$. The cell-free extract showed higher mannanase activity than the culture filtrate at above $60^{\circ}C$.

전통 발효식품인 된장으로부터 mannanase의 생산균으로 분리된 WL-8 균주는 형태적 특성, 생화학적 성질 및 16S rRNA의 염기서열에 근거하여 Bacillus subtilis로 동정되었다. B. subtilis WL-8은 locust bean gum 보다는 밀기울이 첨가된 LB 배지에서 mannanase 생산성이 높았으며, 24시간 배양하였을 때 약 20 U/ml에 이르렀다. 분리균 WL-8의 mannanase 유전자를 클로닝하여 그 염기서열을 결정한 결과 mannanase 유전자는 362 아미노산으로 구성된 단백질을 코드하며 1,086 뉴클레오티드로 이루어졌다. 아미노산 잔기배열을 분석한 결과 WL-8의 mannanase는 GH family 26에 속하며 B. subtilis의 mannanases와 매우 상동성이 높았다. B. subtilis WL-8의 mannanase 유전자를 함유한 재조합 대장균의 배양상등액과 균체파쇄상등액을 사용하여 반응특성을 조사한 결과 pH 5.5와 $60^{\circ}C$에서 최대 반응활성을 보였으며, $60^{\circ}C$보다 높은 온도에서 배양상등액보다는 균체파쇄상등액에 존재하는 mannanase가 더 높은 활성을 보였다.

Keywords

References

  1. Akino, T., C. Kato, and K. Horikoshi. 1989. The cloned $\beta$ -mannanase gene from alkalophilic Bacillus sp. AM-001 produceds two $\beta$-mannanases in Escherichiacoli. Arch. Microbiol. 152, 10-15. https://doi.org/10.1007/BF00447004
  2. Akita, M., N. Takeda, K. Hirasawa, H. Sakai, M. Kawamoto, M. Yamamoto, W.D. Grant, Y. Hatada, S. Ito, and K. Horikoshi. 2004. Crystallization and preliminary X-ray study of alkaline mannanase from an alkaliphilic Bacillus isolate. Acta Crystallogr. D. Biol. Crystallogr. 60, 1490-1492. https://doi.org/10.1107/S0907444904014313
  3. Chen, Y., J. Long, L. Liao, Y. Zhang, and J. Yang. 2000. Study on the production of $\beta$-mannanase by Bacillus M50. Wei Sheng Wu Xue Bao. 40, 62-68.
  4. Cui, F., J. Shi, and Z. Lu. 1999. Production of neutral $\beta$-mannanase by Bacillus subtilis and its properties. Wei Sheng Wu Xue Bao. 39, 60-63.
  5. El-Helow, E.R. and A.A. Khattab. 1996. The development of a Bacillus subtilis 168 culture condition for enhanced and accelerated beta-mannanase production. Acta Microbiol. Immunol. Hung 43, 289-299.
  6. El-Helow, E.R., S.A. Sabry, and A.A. Khattab. 1997. Production of $\beta$-mannanase by B. subtilis from agro-industrial by-products: screening and optimization. Antonie van Leeuwenhoek 71, 189-193. https://doi.org/10.1023/A:1000145632710
  7. Fu, X., X. Huang, P. Liu, L. Lin, G. Wu, C. Li, C. Feng, and Y. Hong. 2010. Cloning and characterization of a novel mannanase from Paenibacillus sp. BME-14. J. Microbiol. Biotechnol. 20, 518-524.
  8. Gibbs, M.D., A.U. Elinder, R.A. Reeves, and P.L. Bergquist. 1996. Sequencing, cloning and expression of a $\beta$-1,4-mannanase gene, manA, from the extremely thermophilic anaerobic bacterium, Caldicellulosiruptor Rt8B.4. FEMS Microbiol. Lett. 141, 37-43.
  9. Khanongnuch, C., T. Ooi, and S. Kinoshita. 1999. Cloning and nucleotide sequence of $\beta$-mannanse and cellulase genes from Bacillus sp. 5H. World J. Microbiol. Biotechnol. 15, 249-258. https://doi.org/10.1023/A:1008893606707
  10. Kim, J.H., T.K. Lee, H.C. Yang, and D.K. Oh. 1997. Optimization of medium for $\beta$-mannanase production by Bacillus sp. WS-42. Kor. J. Appl. Microbiol. Biotechnol. 25, 212-217.
  11. Kurokawa, J., E. Hemjinda, T. Arai, S. Karita, T. Kimura, K. Sakka, and K. Ohmiya. 2001. Sequence of the Clostridium thermocellum mannanase gene man26B and characterization of the translated product. Biosci. Biotechnol. Biochem. 65, 548-554. https://doi.org/10.1271/bbb.65.548
  12. Kweun, M.A., H.S. Kim, M.S. Lee, J.H. Choi, and K.H. Yoon. 2003. Mannanase production by a soybean isolate, Bacillus subtilis WL-7. Kor. J. Microbiol. Biotechnol. 31, 277-283.
  13. Kweun, M.A., M.S. Lee, J.H. Choi, K.H. Cho, and K.H. Yoon. 2004. Cloning of a Bacillus subtilis WL-7 mannanase gene and characterization of the gene product. J. Microbiol. Biotechnol. 14, 1295-1302.
  14. Kweun, M.A., J.Y. Shon, and K.H. Yoon. 2004. High-level expression of a Bacillus subtilis mannanase gene in Escherichia coli. Kor. J. Microbiol. Biotechnol. 32, 212-217.
  15. Mendoza, N.S., M. Arai, T. Kawaguchi, F.S. Cubol, E.G. Panerio, T. Yoshida, and L.M. Joson. 1994. Isolation of mannanutilizing bacteria and the culture conditions for mannanase production. World J. Microbiol. Biotechnol. 10, 51-54. https://doi.org/10.1007/BF00357563
  16. Mendoza, N.S., M. Arai, T. Kawaguchi, T. Yoshida, and L.M. Joson. 1994. Purification and properties of mannanase from Bacillus subtilis. World J. Microbiol. Biotechnol. 10, 551-556. https://doi.org/10.1007/BF00367665
  17. Mendoza, N.S., M. Arai, K. Sugimoto, M. Ueda, T. Kawaguchi, and L.M. Joson. 1995. Cloning and sequencing of $\beta$-mannanase gene from Bacillus subtilis NM-39. Biochim. Biophys. Acta 1243, 552-554. https://doi.org/10.1016/0304-4165(95)00011-Y
  18. Oh, Y.P., J.M. Lee, K.H. Cho, and K.H. Yoon. 2002. Isolation and enzyme production of a mannanase-producing strain, Bacillus sp. WL-3. Kor. J. Microbiol. Biotechnol. 30, 247-252.
  19. Stoll, D., A. Boraston, H. Stalbrand, B.W. McLean, D.G. Kilburn, and R.A.J. Warren. 2000. Mannanase Man26A from Cellulomonas fimi has a mannan-binding module. FEMS Microbiol. Lett. 183, 265-269. https://doi.org/10.1111/j.1574-6968.2000.tb08969.x
  20. Sunna, A., M.D. Gibbs, C.W.J. Chin, P.J. Nelson, and P.L. Bergquist. 1999. A gene encoding a novel mutidomain $\beta$-1,4- mannanase from Caldibacillus cellulovorans and action of the recombinant enzyme on kraft pulp. Appl. Environ. Microbiol. 66, 664-670.
  21. Tanaka, M., Y. Umemoto, H. Okamura, D. Nakano, Y. Tamaru, and T. Araki 2009. Cloning and characterization of a beta-1, 4-mannanase 5C possessing a family 27 carbohydrate-binding module from a marine bacterium, Vibrio sp. strain MA-138. Biosci. Biotechnol. Biochem. 73, 109-116. https://doi.org/10.1271/bbb.80521
  22. Yoon, K.H. and B.L. Lim. 2007. Cloning and strong expression of a Bacillus subtilis WL-3 mannanase gene in B. subtilis. J. Microbiol. Biotechnol. 17, 1688-1694.
  23. Yosida, S., Y. Sako, and A. Uchida. 1997. Purification, properties, and N-terminal amino acid sequences of guar gum-degrading enzyme from Bacillus circulans K-1. Biosci. Biotechnol. Biochem. 61, 251-255. https://doi.org/10.1271/bbb.61.251