Enzymatic Characterization of Bacillus cereus Lactate Dehydrogenase Isozymes Expressed in Escherichia coli

Bacillus cereus에서 유래한 Lactate Dehydrogenase 동질효소 유전자의 대장균 내 발현 및 효소특성 규명

  • Jang, Myoung-Uoon (Department of Food Science and Technology, Chungbuk National University) ;
  • Park, Jung-Mi (Department of Food Science and Technology, Chungbuk National University) ;
  • Lee, Hong-Gyun (Department of Food Science and Technology, Chungbuk National University) ;
  • Lee, So-Ra (Department of Food Science and Technology, Chungbuk National University) ;
  • Kim, Tae-Jip (Department of Food Science and Technology, Chungbuk National University)
  • Received : 2010.05.20
  • Accepted : 2010.06.14
  • Published : 2010.06.30

Abstract

Lactate dehydrogenases (LDHs) have been highly focused for long time, due to their important roles in biochemical and metabolic pathways of cells. On the basis of genome-wide searching results, three putative LDH genes from Bacillus cereus ATCC 14579 genome have been PCR-amplified, cloned, and well-expressed in E. coli. All three BcLDH isozymes are supposed to share highly conserved catalytic amino acid residues in common $NAD^+$-dependent LDHs. Meanwhile, BcLDH1 consisting of 314 amino acids shares 86 and 49% of identities with BcLDH2 and 3, respectively. Interestingly, only BcLDH1 showed the converting activities between L-lactate and pyruvate in the presence of $NAD^+$ coenzyme, while the other isozymes are likely to have almost no activity. As a result, it was revealed that BcLDH1 can be a typical $NAD^+$-dependent L-lactate-specific dehydrogenase.

Lactate dehydrogenases (LDHs)는 세포 내의 생화학적 대사경로에서 중요한 역할을 담당하는 효소로서 오랜 동안 많은 관심을 받았다. 본 연구에서는 다양한 미생물 genome database의 탐색을 통해 Bacillus cereus ATCC 14579 genome으로부터 LDH로 추정되는 3종의 유전자를 발견하고, 대장균에서 클로닝 및 대량 발현하였다. 모든 BcLDH 동질효소들의 상동부위 아미노산 잔기 대부분이 기존의 $NAD^+$-의존형 LDH와 높은 상동성을 보였다. 한편 314개의 아미노산으로 이루어진 BcLDH1과 2는 86%의 서열 상동성을 보였으나, BcLDH3와는 49%의 상동성을 나타냈다. 흥미롭게도 BcLDH1만이 $NAD^+$ 조효소 존재 하에서 L-lactate와 pyruvate 간의 상호전환 활성을 나타냈으며, 그 외의 동질효소들은 거의 활성을 보이지 않았다. 결론적으로 BcLDH1은 전형적인 $NAD^+$-의존형이며, L-lactate에 특이적인 dehydrogenase 효소임을 확인하였다.

Keywords

References

  1. Ankolekar, C., T. Rahmati, and R.G. Labbe. 2009. Detection of toxigenic Bacillus cereus and Bacillus thuringiensis spores in U.S. rice. Int. J. Food Microbiol. 128, 460-466. https://doi.org/10.1016/j.ijfoodmicro.2008.10.006
  2. Barstow, D.D., A.R. Clarck, W.N. Chia, D. Wigley, A.F. Sharman, J.J. Holbrook, T. Arkinson, and N.P. Minton. 1986. Cloning, expression and complete nucleotide sequence of Bacillus stearothermophilus L-lactate dehydrogenase gene. Gene 46, 47-55. https://doi.org/10.1016/0378-1119(86)90165-4
  3. Bernard, N., T. Ferain, D. Garmyn, P. Hols, and J. Delcour. 1991. Cloning of the D-lactate dehydrogenase gene from Lactobacillus delbrueckii subsp. bulgaricus by complementation in Escherichia coli. FEBS Lett. 290, 61-64. https://doi.org/10.1016/0014-5793(91)81226-X
  4. Berwal, R., N. Gopalan, K. Chandel, G.B. Prasad, and S. Prakash. 2008. Plasmodium falciparum: enhanced soluble expression, purification and biochemical characterization of lactate dehydrogenase. Exp. Parasitol. 120, 135-141. https://doi.org/10.1016/j.exppara.2008.06.006
  5. Clarke, A.R., T. Atkinson, and J.J. Holbrook. 1989. From analysis to synthesis: New ligand binding sites on the lactate dehydrogenase framework, Part I. Trends Biochem. Sci. 14, 101-105. https://doi.org/10.1016/0968-0004(89)90131-X
  6. Clarke, A.R., T. Atkinson, and J.J. Holbrook. 1989. From analysis to synthesis: New ligand binding sites on the lactate dehydrogenase framework, Part II. Trends Biochem. Sci. 14, 145-148. https://doi.org/10.1016/0968-0004(89)90147-3
  7. Datta, R., S.P. Tsai, P. Bonsignore, S.H. Moon, and J.R. Frank. 1995. Technological and economic potential of poly(lactic acid) and lactic acid derivatives. FEMS Microbiol. Rev. 16, 221-231. https://doi.org/10.1111/j.1574-6976.1995.tb00168.x
  8. Diez-Gonzalez, F., J.B. Russell, and J.B. Hunter. 1997. NADindependent lactate and butyryl-CoA dehydrogenases of Clostridium acetobutylicum P262. Curr. Microbiol. 34, 162-166. https://doi.org/10.1007/s002849900162
  9. Garmyn, D., T. Ferain, N. Bernard, P. Hols, and J. Delcour. 1995. Cloning, nucleotide sequence, and transcriptional analysis of the Pediococcus acidilactici L-(+)-lactate dehydrogenase gene. Appl. Environ. Microbiol. 61, 266-272.
  10. Gavie, E.I. 1980. Bacterial lactate dehydrogenases. Microbiol. Rev. 44, 106-139.
  11. Granum, P.E. 2001. Bacillus cereus, pp. 373-381. In Food Microbiology. Fundamentals and Frontiers, 2nd Ed. In M.P. Doyle, L.P. Beuchat, and T.J. Montville (eds.). ASM Press, Washington, D.C., USA.
  12. Hediger, M.A., G. Frank, and H. Zuber. 1986. Structure and function of L-lactate dehydrogenases from thermophilic and mesophilic bacteria, IV. The primary structure of the mesophilic lactate dehydrogenase from Bacillus subtilis. Biol. Chem. Hoppe Seyler 367, 891-903. https://doi.org/10.1515/bchm3.1986.367.2.891
  13. Horikiri, S., Y. Aizawa, T. Kai, S. Amachi, H. Shinoyama, and T. Fujii. 2004. Electron acquisition system constructed from an NAD-independent D-lactate dehydrogenase and cytochrome c2 in Rhodopseudomonas palustris No. 7. Biosci. Biotechnol. Biochem. 68, 516-522. https://doi.org/10.1271/bbb.68.516
  14. Huang, J., Y. Huang, X. Wu, W. Du, X. Yu, and X. Hu. 2009. Identification, expression, characterization, and immunolocalization of lactate dehydrogenase from Taenia asiatica. Parasitol. Res. 104, 287-293. https://doi.org/10.1007/s00436-008-1190-2
  15. Ito, Y. and T. Sasaki. 1994. Cloning and nucleotide sequencing of L-lactate dehydrogenase gene from Streptococcus thermophilus M-192. Biosci. Biotechnol. Biochem. 58, 1569-1573. https://doi.org/10.1271/bbb.58.1569
  16. Iwata, S. and T. Ohta. 1993. Molecular basis of allosteric activation of bacterial L-lactate dehydrogenase. J. Mol. Biol. 230, 21-27. https://doi.org/10.1006/jmbi.1993.1122
  17. Jang, M.U. and T.J. Kim. 2008. Molecular cloning and overexpression of L-lactate dehydrogenase gene from Bacillus halodurans. J. Agr. Sci. Chungbuk Nat'l. Univ. 24, 95-104.
  18. Jin, Q., J.Y. Jung, Y.J. Kim, H.J. Eom, S.Y. Kim, T.J. Kim, and N.S. Han. 2009. Production of L-lactate in Leuconostoc citreum via heterologous expression of L-lactate dehydrogenase gene. J. Biotechnol. 144, 160-164. https://doi.org/10.1016/j.jbiotec.2009.08.012
  19. Lee, J.H., M.H. Choi, J.Y. Park, H.K. Kang, H.W. Ryu, C.S. Sunwo, Y.J. Wee, K.D. Park, D.W. Kim, and D. Kim. 2004. Cloning and characterization of the lactate dehydrogenase genes from Lactobacillus sp. RKY2. Biotechnol. Bioproc. Eng. 9, 318-322. https://doi.org/10.1007/BF02942351
  20. Ma, C., C. Gao, J. Qiu, J. Hao, W. Liu, A. Wang, Y. Zhang, M. Wang, and P. Xu. 2007. Membrane-bound L- and D-lactate dehydrogenase activities of a newly isolated Pseudomonas stutzeri strain. Appl. Microbiol. Biotechnol. 77, 91-98. https://doi.org/10.1007/s00253-007-1132-4
  21. Okano, K., Q. Zhang, S. Shinkawa, S. Yoshida, T. Tanaka, H. Fukuda, and A. Kondo. 2009. Efficient production of optically pure D-lactic acid from raw corn starch by using a genetically modified L-lactate dehydrogenase gene-deficient and alpha-amylase-secreting Lactobacillus plantarum strain. Appl. Environ. Microbiol. 75, 462-467. https://doi.org/10.1128/AEM.01514-08
  22. Richter, K. and C. Berthold. 1998. Biotechnological conversion of sugar and starchy crops into lactic acid. J. Agric. Eng. Res. 71, 181-191. https://doi.org/10.1006/jaer.1998.0314
  23. Sakowicz, R., K.W. Kallwass, W. Parris, C.M. Kay, J.B. Jones, and M. Gold. 1993. Threonine 246 at the active site of the L-lactate dehydrogenase of Bacillus stearothermophilus is important for catalysis but not for substrate binding. Biochemistry 32, 12730-12735. https://doi.org/10.1021/bi00210a023
  24. Schlatter, D., O. Kriech, F. Suter, and H. Zuber. 1987. The primary structure of the psychrophilic lactate dehydrogenase from Bacillus psychrosaccharolyticus. Biol. Chem. Hoppe Seyler 368, 1435-1446. https://doi.org/10.1515/bchm3.1987.368.2.1435
  25. Sodergard, A. and M. Stolt. 2002. Properties of lactic acid based polymers and their correlation with composition. Prog. Polym. Sci. 27, 1123-1163. https://doi.org/10.1016/S0079-6700(02)00012-6
  26. Taguchi, H. and T. Ohta. 1991. D-Lactate dehydrogenase is a member of the D-isomer-specific 2-hydroxyacid dehydrogenase family. Cloning, sequencing, and expression in Escherichia coli of the D-lactate dehydrogenase gene of Lactobacillus plantarum. J. Biol. Chem. 266, 12588-12594.
  27. Tokiwa, Y. and B.P. Calabia. 2006. Biodegradability and biodegradation of poly(lactide). Appl. Microbiol. Biotechnol. 72, 244-251. https://doi.org/10.1007/s00253-006-0488-1
  28. Tynecka, Z. and A. Malm. 1996. Cadmium-sensitive targets in the aerobic respiratory metabolism of Staphylococcus aureus. J. Basic Microbiol. 36, 447-452. https://doi.org/10.1002/jobm.3620360610
  29. Zboril, P. and V. Wernerova. 1996. The isolation and some properties of the membrane-bound lactate dehydrogenase of Paracoccus denitrificans. Biochem. Mol. Biol. Int. 39, 595-605.