• Title/Summary/Keyword: trio

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A Program for Efficient Phasing of Three-Generation Trio SNP Genotype Data

  • Song, Sang-Hoon;Kim, Sang-Soo
    • Genomics & Informatics
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    • v.9 no.3
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    • pp.138-141
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    • 2011
  • Here, we report a computer program written in Python, which phases SNP genotypes and infers inherited deletions based on the pattern of Mendelian inheritance within a trio pedigree. When tiered trio genotypes that encompass three generations are available, it narrows a recombination event down to a region between two consecutive heterozygous markers. In addition, the phase information that is inferred from the upper trio that is formed by one of the parents and grandparents can be propagated to phase the genotypes of the lower trio that is formed by the parents and an offspring.

인산가용화균 PeniciLLium sp. PS-113의 액상비료 제제화

  • Tae, Eon-Hui;Lee, Tae-Geun;Gang, Seon-Cheol
    • 한국생물공학회:학술대회논문집
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    • 2001.11a
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    • pp.398-399
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    • 2001
  • A fungus. Penicillium sp. PS-113. with high phosphate-solubilizing activities was isolated from soil and tested the viability in POA medium supplemented with various concentrations of Trio in order to develop a dispersing agent for liquid formulation. Moreover, the number of Penicillium sp. PS-113 conidia, stored at $4^{\circ}C$ and $25^{\circ}C$ with Trio(0.1%) and various concentrations of additives($Cu^{++}$ $Mo^{++}$, bio-ceramic, Tween 80, PEG 200. diatomite. SDS), was counted on PDA at the intervals of 2 weeks. As a result, the liquid formulation containing 0.1 %( v/v) Trio was remarkably improved in dispersing ability and the viability of the conidia, and each of the supplements (0,01% $Mo^{++}$, 0.5% bio-ceramic. 1.0% Tween 80, 1.0% PEG 200) was similar to the 0.1% Trio.

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Studies on Sensory Evaluation -[Part II] Trio Paired Comparison- (관능검사(官能檢査)에 관(關)한 연구(硏究) -[제2보(第2報)] 3각1대비교법(3角1對比較法)에 대하여-)

  • Hong, Jin
    • Applied Biological Chemistry
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    • v.20 no.3
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    • pp.270-278
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    • 1977
  • In case of sensory evaluation with multi-samples and long-period, in spite of using method with good sensitivity, quality differences among samples could net be detected well because of panel's fatigue and tiredness. So new method to reduce panel's sense of psychological and physiological responsibility, "Trio Paired Comparison", is designed, and New Modified Scheffe's Method 2 as the statistical method for a test of "Trio Paired Comparison" is proposed. And also in this paper problems and countermeasures in applicating "Trio Paired Comparison" are considered.

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Evaluation of Uricult Trio Test as a Rapid Screening of UTI in Children with Fever (소아 요로감염 진단에 있어 신속배양검사(Uricult Trio)의 유용성에 관한 연구)

  • Lee, Jin;Kim, Eun Jin;Lee, Taek Jin;Chang, Jin Keun;Cha, Sung-Ho
    • Pediatric Infection and Vaccine
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    • v.17 no.2
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    • pp.74-82
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    • 2010
  • Purpose : The Dipslide culture test is a rapid method for diagnosis of urinary tract infection (UTI). The aim of this study is to determine the diagnostic availability of a urine Dipslide test for evaluation of UTI in febrile children. Methods : Urine specimens from 151 febrile infants were inoculated by a routine blood agar urine culture method and the Dipslide test at the same time. Following incubation for 16-24 hours, the results of the Dipslide test were read at the next visit. Both results of Dipslide and those of routine culture were compared. Results : The mean age of subjects was 15${\pm}$10.6 months. There were 150 infants (99.3%) who had fever with a mean duration of 2.6${\pm}$2.6 days. Thirty two infants (21.2%) were diagnosed as having UTI. Sensitivity and specificity of Uricult Trio CLED medium were 59.4% and 84.8%, respectively. Sensitivity and specificity of Uricult Trio E. coli medium were 60.0% and 96.2%, respectively. The Pearson correlation coefficient between results of Uricult Trio CLED medium and urine culture was 0.438 (P=0.01). Correlation between results of Uricult Trio E. coli medium and urine culture was 0.617 (P=0.01). Conclusion : The Dipslide test requires only 16-24 hours with high specificity in terms of UTI caused by E. coli without the problems associated with specimen delay. This test seems to be helpful for exclusion of UTI in febrile infants and it may reduce unnecessary hospitalization and antibiotic use. However, further studies are required before the product can be recommended as a routine diagnostic tool.

TRIO-CINEMA의 환경시험 및 결과 분석

  • Geum, Gang-Hun;U, Ju;Lee, Seong-Hwan;Lee, Yong-Seok;Jeon, Je-Heon;Chae, Gyu-Seong;Jin, Ho;Seon, Jong-Ho;Lee, Dong-Hun;Thomas, Immel;Lin, Robert P.
    • The Bulletin of The Korean Astronomical Society
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    • v.37 no.2
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    • pp.167.2-167.2
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    • 2012
  • 경희대학교와 UC Berkeley, Imperial College London에서 공동으로 진행하는 TRIO-CINEMA Mission(TRiplet Ionosphere Observatory-Cubesat for Ion, Neutral, Electron and MAgnetic fields)은 총 3기의 초소형 위성으로 구성되어 있다. 3기의 위성은 고도 650~800km 상공의 태양동주기 궤도운동을 예상하고 있으며, 지구 근접공간의 입자 검출과 자기장 측정의 과학 임무를 맡게 된다. TRIO-CINEMA 비행 모델(Flight Model)의 환경시험은 진동시험과 열진공시험으로 진행되었다. 진동시험은 X, Y, Z 세 축에 대해 Sine 과 Random 모드로 진행되었다. TRIO-CINEMA가 탑재 될 러시아의 드네프르 로켓의 요구사항은 각 축에서 20Hz 이상의 고유진동수, Sine의 경우 최대 0.8G와 4oct/min Sweep Rate, Random의 경우 5.2Grms 와 35초의 지속시간에서의 안정성을 만족하는 것이다. 시험 결과 TRIO-CINEMA가 요구사항을 모두 만족시키는 것을 확인하였다. 또한, 열 주기 시험(Thermal Cycling Test)을 진행하여 우주공간에서 위성 시스템이 정상 동작하는지에 대한 신뢰성을 검증하였다. 열주기 시험은 미국 MIL표준 값을 참고하여 $10^{-6}Torr$에서 $-20{\sim}30^{\circ}C$의 온도를 주었으며, 시험을 진행하는 동안과 시험 후에 위성이 정상작동 함을 확인하였다. 이에 본 연구의 시험 방법과 그 결과를 기술하였다.

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Development of a Tree Ring Measuring Program Using Smartphone-Captured Images (스마트폰 촬영 이미지를 활용한 나이테 검출 및 분석 프로그램 개발)

  • Kim, Dong-Hyeon;Kim, Tae-Lee;Cho, Hyung-Joo;Kim, Dong-Geun
    • Journal of Korean Society of Forest Science
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    • v.109 no.4
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    • pp.484-491
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    • 2020
  • In this study, to solve the existing inefficient stem analysis process and expensive equipment cost problems, a method for detecting and analyzing tree rings using smartphone images was proposed and a semi-automated computer program (TRIO, Tree Ring Information) was developed. TRIO can measure the annual ring radius and save the results to Excel. Since TRIO uses smartphone images, the results may vary depending on the quality of the smartphone camera. Therefore, using the Samsung Galaxy S10 and Tap 2, 30 dics images of Pinus rigida were acquired and analyzed, and these were compared with WinDENDROTM. As a result of the study, both Samsung Galaxy S10 and S2 showed significant results with WinDENDROTM, and the R2 value of S10 had a high correlation as 0.976, and RMSE was analyzed as 0.4199, and very similar results were output. The R2 value of S2 was 0.975 and the RMSE was 0.4232, showing no significant difference from S10. Accordingly, the TRIO developed in this study analyzed the annual radius value very similar to WinDENDROTM.

Mechanical Design, Analysis, and Environment test for TRIO-CINEMA

  • Lee, Yong-Seok;Kim, Tae-Yeon;Yu, Je-Geon;Jin, Ho;Seon, Jong-Ho;Lee, Dong-Hun;Imme, Thomas;Lin, Robert P.
    • The Bulletin of The Korean Astronomical Society
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    • v.37 no.1
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    • pp.67.2-67.2
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    • 2012
  • 경희대학교와 UC Berkeley, Imperial College London은 우주관측을 위한 초소형 인공위성인 TRIO-CINEMA(TRIO-CINEMA) Project를 수행하고 있다. TRIO-CINEMA는 총 3기의 인공위성으로 경희대학교에서 2기의 위성을, UC Berkeley에서 1기의 위성을, Imperial College에서 3개의 자력계를 제작하고 있다. CINEMA는 Cubesat의 3U 규격으로 크기는 $100mm{\times}100mm{\times}340.5mm$이고 무게는 약 3 kg, 소비전력은 약 3 W이며, 지구 주변의 ENA측정을 위한 주 탑재체인 STEIN(SupraThermal Electrons, Ions, and Neutrals)과 자기장 측정을 위한 부 탑재체인 MAGIC(MAGnetometer from Imperial College)이 탑재되어 약 1년간 800 km 태양동주기 궤도에서 임무를 수행할 예정이다. 위성의 발사는 별도의 POD(Picosatellite Orbital Deployer)라는 Adaptor를 사용해 발사체에 탑재되는데, 발사환경에서 위성이 받을 모든 현상에 관하여 NX Nastran을 사용해 계산을 진행하였다. 계산 결과의 검증을 위해 위성의 Structure Model을 가지고 Random Vibration test를 수행해 위성의 고유 진동수를 측정하였다. 또한 위성이 궤도에서 운용 중 다양하게 받게 되는 열원에 따른 위성의 각 부분의 온도변화를 NX TMG program을 사용하여 계산하였다. 계산 결과의 검증을 위해 3월 Thermal Cycle test 및 Thermal Balance test를 수행할 예정이다. UC Berkeley에서 제작한 위성 1기는 제작완료 후 발사를 위해 발사장으로 배송을 완료하였고, 경희대학교에서 제작 중인 CINEMA 위성 2기는 2012년 후반기 러시아에서 Dnepr 로켓을 사용해 발사 예정이다.

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Binary Search on Levels Using Bloom filter for IPv6 Address Lookup (IPv6 주소 검색을 위한 블룸 필터를 사용한 레벨에 따른 이진 검색 구조)

  • Park, Kyong-Hye;Lim, Hye-Sook
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.34 no.4B
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    • pp.403-418
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    • 2009
  • IP version 6 (IPv6) is a new If addressing scheme that has 128-bit address space. IPv6 is proposed to solve the address space problem of IP version 4 (IPv4) which has 32-bit address space. For a given IPv6 routing set, if a forwarding table is built using a trio structure, the trio has a lot more levels than that for IPv4. Hence, for IPv6 address lookup, the binary search on trio levels would be more appropriate and give better search performance than linear search on trio levels. This paper proposes a new IPv6 address lookup algorithm performing binary search on trio levels. The proposed algorithm uses a Bloom filter in pre-filtering levels which do not have matching nodes, and hence it reduces the number of off-chip memory accesses. Simulation has been performed using actual IPv6 routing sets, and the result shows that an IPv6 address lookup can be performed with 1-3 memory accesses in average for a routing data set with 1096 prefixes.

Hierarchical Priority Trie for Efficient Packet Classification (효율적인 패킷 분류를 위한 계층 우선순위 트라이)

  • Chu, Ha-Neul;Lim, Hye-Sook
    • Proceedings of the IEEK Conference
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    • 2007.07a
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    • pp.15-16
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    • 2007
  • In order to provide value-added services, next generation routers should perform packet classification for each incoming packet at wire-speed. In this paper, we proposed hierarchical priority trio (Hptrie) for packet classification. The proposed scheme improves the search performance and the memory requirement by replacing empty internal nodes in ordinary hierarchical trio with priority nodes which are the nodes including the highest priority rule among sub-trie nodes.

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The Surface Properties using various separating materials of dental gypsum products (다양한 석고 분리제를 이용한 치과용 석고의 표면 특성에 관한 연구)

  • Sung, Hwan-Kyung;Lee, Gyu-Sun;Hwang, Jae-Sun
    • Journal of Technologic Dentistry
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    • v.30 no.1
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    • pp.17-23
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    • 2008
  • Gypsum products are used for the preparation of stone casts of oral and maxillofacial structures and as important adjuncts to dental laboratory operations involved in the production of dental prosthesis. Accuracy and dimensional stability over time are properties of concern in fixed prothodontics. Gypsum products used in denstry are a form calcium sulfate hemihydrate and are classified as 1 of 5 types according to International Standard Organization(ISO) 6873. All die materials exhibit some dimensional change during setting, but expansion and contraction during setting and dimensional changes in response to varations in temperature and the water-powder ratio must be minimal. Although numerous investigators have studied the properties of die materials, several products have been introduced recently with manufacturer claims of superior dimensional stalility. The aim of this study was to determine the surface properties using various separating materials of dental gypsum products The results were as follows 1. In the comparison of first and second plaster distances before separation in different separating agent, there was no significant difference except using Trio separating agent. The interface using Trio separating agent forms like to pores. 2. In the comparison of first and second plaster distances after separation in different separating agent, there was significant difference. The interface of plasters using WD-40, Trio and Vaseline was showed some gaps. Each they were measured at average 7.97 $\pm$ 2.07 ${\mu}m$, 63.09 $\pm$ 23.25 ${\mu}m$, 27.59 $\pm$ 4.19 ${\mu}m$. 3. In the comparison of the surface, the surface of control sample(using none seperating agent) showed irregular properties and the surface using Trio and Vaseline become wrinkled. Specially the surface using Vaseline was showed shiny properties. But the surface using MAGIC SEP, Plaster seperating agent, WD-40 showed regular properties.

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