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DNA Sequences Compression using Repeat technique and Selective Encryption using modified Huffman's Technique

  • Syed Mahamud Hossein; Debashis De; Pradeep Kumar Das Mohapatra
    • International Journal of Computer Science & Network Security
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    • v.24 no.8
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    • pp.85-104
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    • 2024
  • The DNA (Deoxyribonucleic Acid) database size increases tremendously transmuting from millions to billions in a year. Ergo for storing, probing the DNA database requires efficient lossless compression and encryption algorithm for secure communication. The DNA short pattern repetitions are of paramount characteristics in biological sequences. This algorithm is predicated on probing exact reiterate, substring substitute by corresponding ASCII code and engender a Library file, as a result get cumulating of the data stream. In this technique the data is secured utilizing ASCII value and engendering Library file which acts as a signature. The security of information is the most challenging question with veneration to the communication perspective. The selective encryption method is used for security purpose, this technique is applied on compressed data or in the library file or in both files. The fractional part of a message is encrypted in the selective encryption method keeping the remaining part unchanged, this is very paramount with reference to selective encryption system. The Huffman's algorithm is applied in the output of the first phase reiterate technique, including transmuting the Huffman's tree level position and node position for encryption. The mass demand is the minimum storage requirement and computation cost. Time and space complexity of Repeat algorithm are O(N2) and O(N). Time and space complexity of Huffman algorithm are O(n log n) and O(n log n). The artificial data of equipollent length is additionally tested by this algorithm. This modified Huffman technique reduces the compression rate & ratio. The experimental result shows that only 58% to 100% encryption on actual file is done when above 99% modification is in actual file can be observed and compression rate is 1.97bits/base.

Development of a Data-Driven and Physics based Model Linked Simulation Model for Ship Engine Performance Evaluation (선박 엔진 성능평가를 위한 데이터 및 물리 기반 모델 연동 엔진 시뮬레이션 모델 개발)

  • Yonadan Choi;Sungjun Yoon;Byoungill Rhee;Tag Gon Kim;Beomcheol Ham
    • Journal of the Korea Society for Simulation
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    • v.33 no.3
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    • pp.1-11
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    • 2024
  • There are various methods to evaluate performance of a internal combustion engine. However, there have been several limitations for each methods. In this study, to overcome such limitations of a previous method, a data-driven model and physics based model linked simulation model is developed. The representative components of turbocharged engine which participate in running loop of an engine are sorted out. Sorted out components are modeled either by data-driven method or by physics based method. The engine simulator is developed by combining component model using C++ and Python. The convergence of several variables is tested to verify a simulator. Finally, as most variables has shown less than 5% error in comparison between the simulation result and the real engine test result, it is concluded that the simulator is validated. It is expected that the developed simulator could evaluate performance of various engine models with small effort. In addition, it is expected that the developed simulator would play a key role in developing an engine digital twin.

A Study on Hospital Staff's Perception of Death and Hospice (병원직원들의 죽음 및 호스피스 인식에 관한 연구)

  • Kim, Mi-Jeong
    • Korean Journal of Hospice Care
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    • v.7 no.2
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    • pp.15-25
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    • 2007
  • The purpose of this study was to survey the hospital staff's perception of hospice and death and thereby, suggest the ways to help them have a mature attitude towards and a better understanding of death through an effective education on hospice. For this purpose, this study was designed to provide some data useful for the hospital staff not experienced in facing the dying patients to handle the desperate situation skillfully and engage themselves more effectively in their hospice services. For this study, the researcher conducted a questionnaire survey for the staff of 'C' hospital in Seoul about their hospice philosophy, attitudes towards hospice and perception of death for the period from February, 2006 to March, 2006. A total of 751 subjects responded effectively to the survey. The data collected were analyzed using the SF55 11.0 for ANOVA and T-test in order to test the relationships among subjects' perception of death, their demographic variables, their health condition, their hospice philosophy formed from their experiences of patients' death and hospice services and their attitudes towards hospice. Besides, the correlations among their hospice philosophy, perception of death and attitudes towards hospice were tested. The results of this study can be summarized as follows; First, as a result of testing the relationships among subjects' experiences of health consulting. their experiences of patients' death and hospice and their hospice philosophy, it was confirmed that their experiences of health and death consulting and their experiences of having been educated were relevant. Second, it was found that such variables as health condition, death, experience of hospice and attitude towards hospice were not significantly correlated with each other. Third, as a consequence of testing the relationships among health condition, death, experience of hospice and perception of death, it was disclosed that only the physical health condition was significant. Fourth, it was confirmed that subjects' hospice philosophy, perception of death and attitudes towards hospice were at the usual level on average. Fifth, hospice philosophy, perception of death and attitudes towards hospice were found correlated significantly with each other. Sixth, as a result of the stepwise variable adjustment for such variables as hospice philosophy, perception of death, attitudes towards hospice, it was found that the adjusted r-square value was 0.347 when departments, experience of having been requested by dying patient for consulting, experience of having been educated on hospice, religion and marital status were set as independent variables. And the estimated value of each variable was found significant. Seventh, as a consequence of conducting the multiple regression analysis by setting 'religion' as significant independent variable, it was found that the estimated value of physical health condition was not significant statistically. This, as a result of the simple regression analysis for 'religion' only, its explanatory power was found .197, while its adjusted r-square value was 0.20. Eight, it was found that subjects' attitude towards hospice was significantly correlated with such variables of experience of patient's or relative's death, experience of having been requested for consulting about death, gender, marital status and departments. As a result of the multiple regression analysis and the subsequent stepwise adjustment for this variable, it was found that only 'experience of having been requested for consulting' had some explanatory power: its adjusted r-square value was 0.089. As discussed above, this study tested the correlations among various variables including hospital staff's attitude towards hospice and perception of death and thereby, provided for the data useful for their education on hospice. This study may be significant in that it proved that it would be essential to educate hospital staff on hospice for more effective care of hospice patients and their family members at hospital.

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Finite Element Analysis of Ultra High Performance Fiber Reinforced Concrete 50M Composite Box Girder (초고강도 섬유보강 콘크리트 50M 합성 박스거더의 유한요소해석)

  • Makhbal, Tsas-Orgilmaa;Kim, Do-Hyun;Han, Sang-Mook
    • Journal of the Korean Recycled Construction Resources Institute
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    • v.6 no.2
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    • pp.100-107
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    • 2018
  • The material and geometrical nonlinear finite elment analysis of UHPFRC 50M composite box girder was carried out. Constitute law in tension and compressive region of UHPFRC and HPC were modeled based on specimen test. The accuracy of nonlinear FEM analysis was verified by the experimental result of UHPFRC 50M composite girder. The UHPFRC 50M segmental composite box girder which has 1.5% steel fiber of volume fraction, 135MPa compressive strength and 18MPa tensile strength was tested. The post-tensioned UHPFRC composite girder consisted of three segment UHPFRC U-girder and High Strength Concrete reinforced slab. The parts of UHPFRC girder were modeled by 8nodes hexahedron elements and reinforcement bars and tendons were built by 2nodes linear elements by Midas FEA software. The constitutive laws of concrete materials were selected Multi-linear model both of tension and compression function under total strain crack model, which was included in classifying of smeared crack model. The nonlinearity of reinforcement elements and tendon was simulated by Von Mises criteria. The nonlinear static analysis was applied by incremental-iteration method with convergence criteria of Newton-Raphson. The validation of numerical analysis was verified by comparison with experimental result and numerical analysis result of load-deflection response, neutral axis coordinate change, and cracking pattern of girder. The load-deflection response was fitted very well with comparison to the experimental result. The finite element analysis is seen to satisfactorily predict flexural behavioral responses of post-tensioned, reinforced UHPFRC composite box girder.

Analysis of Factors influencing Severity of Motorcycle Accidents using Ordered Probit Model (순서형 프로빗모형에 의한 이륜차 사고심각도의 영향요인 분석)

  • Choi, Jung Woo;Kum, Ki Jung
    • International Journal of Highway Engineering
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    • v.16 no.5
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    • pp.143-154
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    • 2014
  • PURPOSES : This study drew factors affecting motorcycle accidents in Seoul by severity using an ordered probit model and aimed to analyze and verify the drawn influence factors. METHODS : As the severity of the accidents could be classified into three types (fatal injury, serious injury and minor injury), this study drew the factors affecting accidents by a comparative analysis employing an ordered probit model, removed the variables that would not secure significance sequentially to construct a model with high explanatory power regarding the factors affecting the severity of motorcycle accidents, and calculated the marginal effect of each factor to understand the degree of each factor's impact on the severity. First, Model 1 put in all variables; Model 2 was constructed by removing the variables of the road surface conditions that could not meet the level of significance (p=0.608); Model 3 was constructed by removing gender variable (p=0.423); and Model 4 was constructed finally by removing age variable (p=0.320). RESULTS : As a result of an analysis, statistically significant variables were time of occurrence, type of accident, road alignment and motorcycle displacement, and it turned out that the impacts on the severity were in the following order: a road alignment of left downhill, the type of motorcycle-to-vehicle accidents and a road alignment of a flatland on the left. The significance of the models was tested using the likelihood ratio, the level of significance and suitability statistics about them, and as a result of the test, the significance level and suitability of the constructed models were all excellent. In addition, the model accuracy indicating the accuracy of a predicted value compared to that of the value actually observed was 70.3% for minor injury; 70.1% for serious injury; and 68.6% for fatal injury, and the overall accuracy was 70.2%, which was very high. CONCLUSIONS : As a result of an analysis of motorcycle accidents in Seoul through the ordered probit model and the marginal effect, it turned out that their severity increased in nighttime accidents as compared to daytime ones and gradually increased in the order of motorcycle-to-vehicle accidents, motorcycle-to-person ones and the ones involving motorcycle only. As a result of an analysis, the severity of accidents in road alignments of left downhill, left flatland and straight downhill increased as compared to those in a road alignment of straight flatland and that the severity of accidents of motorcycles with a displacement larger than 50cc was higher than that of those with a displacement smaller than 50cc.

Comparative analysis of nitrite scavenging activity and anti-inflammation effects in the fruiting bodies of medicinal mushrooms (약용버섯류 자실체의 아질산염 소거능 및 항염증 효능 분석)

  • Cho, Jae-Han;Lee, Gang-Hyo;Han, Jae-Gu;Kim, Hyung-Don;Jhune, Chang-Sung
    • Journal of Mushroom
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    • v.13 no.4
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    • pp.330-333
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    • 2015
  • This study was carried out to compare the anti-inflammation effects of various fruiting body of Ganoderma species and Cordyceps militaris, Phelinus linteus extracts. We concentrated Ganoderma species and other medicinal mushrooms by extracting with ethanol. And We made it $100{\mu}g/ml$ concentration. As a result of nitrite scavenging activity, in the contrast to the positive control; Ascorbic acid was 25%, ASI 7080 of Ganoderma species was disappeared up to around 40%. And in the contrast to Ascorbic acid was 55%, ASI 7002 was 78.5% that was the highest anti-inflammation effect in the result of "No assay test". The Cordyceps militaris showed 75% and Hericium erinaceus showed 59.7% of anti-inflammation effect. As a result of the fungus yield control test of $TNF-{\alpha}$ through ELISA method to ASI 7002 of Ganoderma species that showed the highest anti-inflammation, it was reduced as same as LPS non-treatment. We extracted RNA from ASI 7002 Ganoderma species 10, 50, $100{\mu}g/ml$ concentration and LPS $10{\mu}g/ml$ of Raw 264.7 cell. And we tested the expression of iNOS, COX-2 and TNF-a that are kinds of inflammation gene after synthesizing RNA with cDNA. Finally we could find that iNOS, COX-2 and TNF-a were all controlled expression in the result of above experiment.

Effect of Ganjeonggyeok Acupuncture and Saengkankunbi-tang Treatment in the Changes of LFT and Lipid-obesity Index Values (간정격 시술 및 생간건비탕 투여가 간기능 및 비만도 변화에 미치는 영향)

  • Lee, Seong-No;Kim, Sang-Joo;Lee, Jin-Seok;Kim, Eun-Geol;Jang, Suk-Geun
    • Journal of Acupuncture Research
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    • v.25 no.6
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    • pp.47-54
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    • 2008
  • Objectives : This study was aimed to figure out how effectively acupuncture treatment and herb-medicine work on patients with elevation of LFT value and lipid-obesity index. Methods : The subject were 23 patients visited to Dept. of Acupuncture and Moxibustion, Kwangdong Oriental Medicine Hospital, who complained chronic fatigue and wandering pain from Oct. 2007. to Oct. 2008. Before treatments, they were tested for LFT, total cholesterol, triglyceride, body fat ratio and obesity index. They were treated with Ganjeonggyeok acupuncture weekly for 1 month. During acupuncture treatments, we applied Sangkankunbi-tang to all patients twice a day. After 1 month, they were retested for LFT, total cholesterol, triglyceride, body fat ratio and obesity index. Results : 1. After treatments, we could get the result of dropping means of AST, ALT and $\gamma$-GTP value. Statistical significance of ALT and $\gamma$-GTP were recognized before and after treatments, but AST was not recognized. 2. After treatments, we also could get the result of dropping means of total cholesterol, triglyceride, body fat ratio and obesity index. Statistical significance of all values were recognized before and after treatments. 3. Among 23 patients, 10 cases were reported that they were not within normal limits at least one in AST, ALT and $\gamma$-GTP. After treatments of those patients, we could get the result of dropping means of AST, ALT and $\gamma$-GTP value. Statistical significance of all values were recognized before and after treatments. 4. Among 23 patients, 19 cases were reported that they were not within normal limits at least one in total cholesterol, triglyceride, body fat ratio and obesity index. After treatments of those patients, we could get the result of dropping means of total cholesterol, triglyceride, body fat ratio and obesity index. Statistical significance of all values were recognized before and after treatments. Conclusions : Though further study is necessary, our finding suggest that the conduction of Ganjeonggyeok acupuncture and Sangkankunbi-tang treatments have helped to decrease the figures of LFT and lipid-obesity index in patients.

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Comparison of Carbon Dioxide Emission Concentration according to the Age of Agricultural Heating Machine (농업용 난방기의 사용 연식에 따른 이산화탄소 배출농도 비교)

  • Na-Eun Kim;Dae-Hyun Kim;Yean-Jung Kim;Hyeon-Tae Kim
    • Journal of Bio-Environment Control
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    • v.32 no.3
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    • pp.190-196
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    • 2023
  • This study was carried out to collect gas emitted from agricultural heaters using kerosene and to identify the emission concentration of carbon dioxide according to the age of agricultural heating machine. As a result of the linear regression analysis, the carbon dioxide emissions according to the year of agricultural heating machine are R2 = 0.84, which follows y = 26.99x+721.98. Distributed analysis was classified into three groups according to the age of agricultural heating machine. As a result of the distributed analysis, it was 2.196×10-13, which was smaller than the 0.05 probability set for the analysis, which means that there is a difference in at least one group. As a result, the age of the agriculture machine was divided into three groups and the difference between groups was tested. A statistical analysis result was derived that there was a difference in the emission concentration of carbon dioxide according to the age of agricultural heating machine. It is thought that it can be used to investigate greenhouse gas emissions by investigating the amount of carbon dioxide generated by agricultural heaters in the agricultural field of Korea.

Pattern Classification Model using LVQ Optimized by Fuzzy Membership Function (퍼지 멤버쉽 함수로 최적화된 LVQ를 이용한 패턴 분류 모델)

  • Kim, Do-Tlyeon;Kang, Min-Kyeong;Cha, Eui-Young
    • Journal of KIISE:Software and Applications
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    • v.29 no.8
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    • pp.573-583
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    • 2002
  • Pattern recognition process is made up of the feature extraction in the pre-processing, the pattern clustering by training and the recognition process. This paper presents the F-LVQ (Fuzzy Learning Vector Quantization) pattern classification model which is optimized by the fuzzy membership function for the OCR(Optical Character Recognition) system. We trained 220 numeric patterns of 22 Hangul and English fonts and tested 4840 patterns whose forms are changed variously. As a result of this experiment, it is proved that the proposed model is more effective and robust than other typical LVQ models.

Studies on the Processing of Korean Traditional So-Ju, Jindo-Hongju -II. Composition and Sensory Evaluation of Hongju- (한국(韓國) 전통소주(傳統燒酒) (진도홍주(珍島紅酒)) 제조(製造)에 관(關)한 연구(硏究) -제2보. 홍주의 성분 및 관능점사-)

  • Kim, Yong-Soon;Kang, Sung-Hoon;Jung, Ji-Heun
    • Journal of the Korean Society of Food Culture
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    • v.6 no.3
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    • pp.251-255
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    • 1991
  • The flavor and organoleptic properties of Hongju prepared by Kokja and Koji method were tested. There was no great difference of total acid in Hongju with different fermentation methods. The alcohol content of Hongju prepared by Koji method was higher than that of Kokja method and methanol content was very little as about $0.02{\sim}0.03$ mg/ml in all samples. The aldehyde content was $7.5{\sim}32$ mg% and fusel oil was higher in Hongju prepared by Koji method than that of Kokja method. As the result of sensory evaluation, new Hongju, S-N prepared by Kokja method with wheat and rice was to be best quality.

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