• Title/Summary/Keyword: test species

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Changes of Understory Vegetation Structure for 10 Years in Long-Term Ecological Research Site at Mt. Gyebang (계방산 장기생태조사지에서 10년간 하층식생구조변화)

  • Cheon, Kwang Il;Chun, Jung Hwa;Yang, Hee Mun;Lim, Jong Hwan;Shin, Joon Hwan
    • Journal of Korean Society of Forest Science
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    • v.103 no.1
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    • pp.1-11
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    • 2014
  • This study was conducted to investigate the changes understory vegetation composition (shrub and herb layers) in Mt. Gyebang as a northern-temperate deciduous broadleaf forest. Tracheophytes were 146 taxa, consisting 56 families, 93 genera, 124 species, 17 varieties, 3 forma, 2 sub-species and 1 unknown taxa in research subject area. As species area curve analysis, herbaceous layer and shrub species have been decreased over time. As a result of Mantel-test, basal area of upper layer affects to understory vegetation change (p<0.0001). Mean importance value was dominated Lindera obtusiloba (21.585%), Rhododendron schlippenbachii (19.774%) in the shrub layer, identified Sasa borealis (14.082%) and Lindera obtusiloba (7.921%) in the herb layer. According to NMS analysis of shrub layer, Species characterized by strong correlation have been reduced as time goes by. And it reports different species as an increasing in basal area of the upper layer. Herb layer plots of the NMS analysis, Rhododendron schlippenbachii and Rhododendron mucronulatum consistently were affected in shrub layer. In consequence of MRPP-test for changes in vegetation composition, It was analyzed that there are no significant differences for vegetation composition changes on shrub layer in 5-10 years. As a changes of vegetation composition on herb layer were analyzed significantly, composition change of herb layer species was larger than shrub layer species in understory vegetation.

Identification of Fish Species using Affine Transformation and Principal Component Analysis of Time-Frequency Images of Broadband Acoustic Echoes from Individual Live Fish (활어 개체어의 광대역 음향산란신호에 대한 시간-주파수 이미지의 어파인 변환과 주성분 분석을 이용한 어종식별)

  • Lee, Dae-Jae
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.50 no.2
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    • pp.195-206
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    • 2017
  • Joint time-frequency images of the broadband echo signals of six fish species were obtained using the smoothed pseudo-Wigner-Ville distribution in controlled environments. Affine transformation and principal component analysis were used to obtain eigenimages that provided species-specific acoustic features for each of the six fish species. The echo images of an unknown fish species, acquired in real time and in a fully automated fashion, were identified by finding the smallest Euclidean or Mahalanobis distance between each combination of weight matrices of the test image of the fish species to be identified and of the eigenimage classes of each of six fish species in the training set. The experimental results showed that the Mahalanobis classifier performed better than the Euclidean classifier in identifying both single- and mixed-species groups of all species assessed.

Classification in Different Genera by Cytochrome Oxidase Subunit I Gene Using CNN-LSTM Hybrid Model

  • Meijing Li;Dongkeun Kim
    • Journal of information and communication convergence engineering
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    • v.21 no.2
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    • pp.159-166
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    • 2023
  • The COI gene is a sequence of approximately 650 bp at the 5' terminal of the mitochondrial Cytochrome c Oxidase subunit I (COI) gene. As an effective DeoxyriboNucleic Acid (DNA) barcode, it is widely used for the taxonomic identification and evolutionary analysis of species. We created a CNN-LSTM hybrid model by combining the gene features partially extracted by the Long Short-Term Memory ( LSTM ) network with the feature maps obtained by the CNN. Compared to K-Means Clustering, Support Vector Machines (SVM), and a single CNN classification model, after training 278 samples in a training set that included 15 genera from two orders, the CNN-LSTM hybrid model achieved 94% accuracy in the test set, which contained 118 samples. We augmented the training set samples and four genera into four orders, and the classification accuracy of the test set reached 100%. This study also proposes calculating the cosine similarity between the training and test sets to initially assess the reliability of the predicted results and discover new species.

Allelopathy of Tagetes minuta L. Aqueous Extracts on Seed Germination and Root Hair Growth

  • Kil, Ji-Hyun;Shim, Kew-Cheol;Lee, Kyu-Jin
    • The Korean Journal of Ecology
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    • v.25 no.6
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    • pp.395-398
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    • 2002
  • Present paper showed allelopahtic effects of Tagetes minuta aqueous extracts on seed germination and root hair development. Allelopathy of aqueous extracts derived from T. minuta examined using two test plant species (Lotus comiculatus var. japonicus and Lactuca sativa). The seeds of test species were inoculated in petri dishes containing 0, 10,50 and 100% aqueous extracts from T. minuta. At day 5, the relative seed germination ratio to control was evaluated, and the development of seedling root hairs was observed through light microscopy. Seed germination of L. comiculatus var. japonicus was significantly inhibited proportional to the concentrations of aqueous extract, but that of L. sativa wasn't inhibited. The inhibitory allelopathic effect of T. minuta was found in the development and growth of seedling root hairs. It was concluded that the inhibitory allelophatic effects have been to be investigated using various bioassay, for the allelopathy of plant species shows species-specific and organ-specific.

Screening Test on the Ingredient of the Genus Thalictrum Roots in Korea (한국산 Thalictrum속 식물 지하부의 성분검색)

  • Lee, Ihn-Rhan;Yu, Wha-Pil
    • Korean Journal of Pharmacognosy
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    • v.2 no.2
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    • pp.89-93
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    • 1971
  • This study is about the five species of the genus Thalictrum growing abundantly in South Korea. Dried roots of plants; T. aquilegifolium var. japonica, T. simplex var. affine, T. actaefolium, T. tuberiferum were compared by morphological observation and screening test on the ingredient extracted by methanol, ether etc.. The experiments by thin-layer chromatography was at tempted to find out the similarity and the difference among them. In conclusion, the author found that: 1) A special component similar to coumarin was found under UV-ray from T. actaefolium. 2) By thin-layer chromatography, they show the corresponding spot supposed to be that of berberine and magnoflorine according to the $T_{ABLE}\;IV$. Therefore it is worthwhile considering that Thalictrum species would be a substitution for Epimedium species used as a tonic. 3) Thalictrum species has resemblance of ingredient and chemotaxonomy gives more help to classify them than the morphology.

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Decay Efficacies of Plywoods Manufactured by ACQ-treated Veneers of Domestic Softwood and Hardwood Species

  • Suh, Jin Suk;Lee, Hyun Mi;Hwang, Won Jung;Hwang, Sung Wook;Lee, Dong Heub;Park, Sang Bum
    • Journal of the Korea Furniture Society
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    • v.25 no.3
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    • pp.233-237
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    • 2014
  • The eco-friendly preservatives such as ACQ or CUAZ have been used in landscape architectural facilities these days. In this study, the decay efficacies of ACQ treatments were evaluated according to domestic veneer species, concentration of ACQ, weathering test, adhesive type, and fungus type. In case of veneer species, hinoki cypress and yellow poplar showed the highest and lowest decay resistance, respectively. And the decay resistance appeared to be greater in plywoods bonded by resorcinol resin-bonded plywood and non-weathering treated plywood than polyurethane resin-bonded plywood and weathering treated plywood.

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Bycatch reduction plan of offshore dredge in the western sea, Korea (서해안 근해형망 어업의 혼획저감 방안)

  • Sug-Tai KIM;Hyun-Young KIM
    • Journal of the Korean Society of Fisheries and Ocean Technology
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    • v.59 no.4
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    • pp.290-300
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    • 2023
  • This study aimed to identify the actual catch situation of offshore dredge gear which is newly regulated in the legislation. It's also conducted to identify the species composition, weight of the catch including the target species and incidental catches, and to provide the basic information necessary for the resource management of aquatic organisms caught by offshore dredge. During the investigation period (from September 2022 to May 2023), a total of 61 species appeared in the test operation sea of Boryeong, Chungcheongnam-do and Gunsan, Jeollabuk-do, with 31 species of fishes, 11 species of malacostraca, six species of gastropoda, five species of bivalvia, three species of cephalopoda, three species of asteroidea, one species each of asteroidea and holothuroidea appeared. According to the results of the test operation conducted in September and November 2022, the non-catch season of Atrina (Servatrina) pectinata, 1,203 shellfishes were caught out of 2,979 caught in number, showing a bycatch rate of 59.6%, and by weight, 157.9 kg of shellfish was caught out of the total catch of 448.4 kg, showing a bycatch rate of 64.8%. On the other hand, in February and May 2023, the catch season for Atrina (Servatrina) pectinata, 3,692 fishsells were caught out of the 4,232 catches in total, showing a bycatch rate of 12.8%, and by weight, 1,185.0 kg of shellfish was caught out of the total catch of 1,293.2 kg, showing an 8.3% bycatch rate.

A Population Viability Analysis (PVA) for Re-introduction of the Oriental White Stork (Ciconia boyciana) in Korea

  • Sung, Ha-Cheol;Park, Shi-Ryong;Cheong, Seokwan
    • Korean Journal of Environmental Biology
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    • v.30 no.4
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    • pp.307-313
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    • 2012
  • The Oriental White Stork (Ciconia boyciana) is a representative wetland species distributed across East Asia. The species has been declined to face the threat of species extinctions with estimation of at about 3000 individuals. In order to re-introduce the endangered storks in the field, we developed a baseline model using the program VORTEX, performed sensitivity test, and finally suggested an ideal model based on results of the sensitivity test. The baseline model predicted 12.5% extinction probability with mean time to first extinction of 82.0 year. Sensitivity test revealed that two demographic variables (first-year mortality and percent of adult female breeding) had the greatest impacts on population persistence. Thus, corrected model improved the population persistence, where the extinction probability decreased to 1.0% in 100 years by changing values of two variables within a range of applicable to the population. Our models for stork re-introduction suggest this population will be stable by improving first-year mortality and adult female fecundity.

Comparative Study on the Characteristics of Microalgae as Standard Species for Marine Ecotoxicity Tests (Skeletonema sp., Dunaliella tertiolecta) (해양생태독성시험 표준생물로서 미세조류의 특성 비교 연구(Skeletonema sp., Dunaliella tertiolecta))

  • Kim, Tae Won;Moon, Chang Ho;Lee, Su Jin
    • Journal of the Korean Society of Marine Environment & Safety
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    • v.26 no.5
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    • pp.514-522
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    • 2020
  • To understand the ecotoxicological differences between representative Skeletonema sp. and Dunaliella tertiolecta, both producers as international standard test species for marine ecotoxicity testing, we compared each standard test method, and comparatively analyzed the suitability of the species for environmental assessment and their sensitivity to various test substances. Although most of the test conditions were the same in each method, there were differences in limitation of pH changing and the initial inoculation density in the validation criteria, which is supposed to originate from the low growth rate of D. tertiolecta. In terms of suitability, both species showed consistency in test performance by repeatedly meeting the validation criteria required by the standard test methods. The salinity ranges available for testing were 20 and 10 psu for Skeletonema sp. and D. tertioelecta, respectively. Finally, regarding sensitivity, the toxicity sensitivity of Skeletonema sp. was relatively higher than that of D. tertiolecta for the reference toxicant, actual polluted water discharged (ballast water), and other chemicals. This implies that using at least two species of microalgae from different classification groups could help increase the reliability and objectivity of test results in the performance of marine ecotoxicity tests using producers.

Application of Indigenous Benthic Amphipods as Sediment Toxicity Testing Organisms

  • Lee, Jung-Suk;Lee, Kyu-Tae;Kim, Dong-Hoon;Kim, Chao-Kook;Lee, Jong-Hyeon;Park, Kun-Ho
    • Ocean Science Journal
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    • v.40 no.1
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    • pp.17-24
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    • 2005
  • A series of experiments were conducted to develop standard test organisms and test protocols for measuring sediment toxicity using candidate amphipods such as Mandibulophoxus mai, Monocorophium acherusicum, Haustorioides indivisus, and Haustorioides koreanus, which are indigenous to Korea. The relevant association of test species with sediment substrates was one of the important factors in sediment bioassay. The indigenous amphipods M mai and M. acherusicum were well associated with test sediments when they were exposed to various sediment substrates from sand to mud. The tolerant limits to various physico-chemical factors affecting bioassay results such as temperature, salinity and ammonia, as well as sensitivities to reference toxicant and contaminated sediments, were investigated using M. mai and M. acherusicum in the present study. These amphipods were tolerant to relatively wide ranges of salinity $(10{\sim}30\;psu)$ and ammonia (<50 ppm), and displayed relevant sensitivity to temperature as well. They are more sensitive to Cd, the reference toxicant, when compared to the standard test species used in other countries. Field-sediment toxicity tests revealed that M. mai would be more sensitive to sediment-associated pollutants than M. acherusicum, while the sensitivity of M. acherusicum was comparable to that of Leptocheirus plumulosus, which has been used as a standard test species in the United States of America. Overall results of this first attempt to develop an amphipod sediment toxicity test protocol in Korea indicated that M. mai and M. acherusicum would be applicable in the toxicity assessment of contaminated sediments, following the further evaluation encompassing various ecological and toxicological studies in addition to test method standardization.