• Title/Summary/Keyword: taxonomic studies

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A Morphological Study of Symplocaceae in Korea (한국산 노린재나무과의 형태학적 연구)

  • Park, Sang-Hong;Lee, Joongku;Kim, Joo-Hwan
    • Korean Journal of Plant Taxonomy
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    • v.37 no.3
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    • pp.255-273
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    • 2007
  • The morphological characters for 4 taxa of Korean Symplocaceae were examined. Based on morphological examination, numerical analysis was performed to clarify the taxonomic relationships among the taxa. It was found that epidermal characters of leaves, cellular deposition of petals, cellular boundary of petioles, growth of stigmas and pollen grains and their surfaces were useful diagonostic characters. From the results of PCA analysis, four taxa were grouped as species clusters including each populations. Four species of Symplocos were clustered as species groups with clear delimitation. Morphological, numerical, and palynological analyses supported the previous morphological studies on this family.

Further Systematic Studies on Cornus and Relatives by Immunoelectrophoresis (면역학적 전기영동에 의한 층층나무속과 그 근연군의 계통학적 추가연구)

  • Lee, Yoo-Sung
    • Journal of Plant Biology
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    • v.28 no.2
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    • pp.95-104
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    • 1985
  • Additional serological data from radial immunodiffusion and conventional immunoelectrophoresis with combination of presaturation of antibody were obtained for further interpretation of Cornus (and relatives) systematics. Pollen proteins were compared by qualitative and quantitative means. Cornus drummondi and C. stolonifera are very similar to C. florida, and C. amomum and C. recemosa are less similar. Nyssa constitutes the next distinct and most similar family, Nyssaceae to the Cornaceae. The serological affinities indicate that Corokia and Griselinia should not be included within the Cornaceae. Their taxonomic treatment to elevate to the family level is now awaiting until more data are accumulated.

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Studies of Taxonomic Origins of Atractylodis Rhizoma Alba and Atractylodis Rhizoma (백출과 창출의 기원에 대한 식물분류학적 연구)

  • Lee, Je-Hyun;Kim, Yun-Kyung;Hong, Seon-Pyo;Kim, Chung-Sook
    • Korean Journal of Oriental Medicine
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    • v.8 no.1
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    • pp.55-63
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    • 2002
  • The plant origines of Atractylodis Rhizoma Alba and Atractylodis Rhizoma are genus Atractylodes*Compositae). Their origines in pharmacopoeia are slightly different among Korea, Japan, North Korea and China. The species of Atractylodis Rhizoma Alba are Atrctylodes japonica $K_{OIDZ}$. A. ovata $T_{HUNB}$.. Atractylodis Rhizoma are A. lancea DC., A. chinensis DC. and A. koreana $K_{ITM}$. But the texonomic genealogy of Atractylodis Rhizoma Alba is different from that of Atractylodis Rhizoma. The herbal origines of Atractylodis Rhizoma Alba and Atractylodis Rhizoma were not different at the early days. Since Tao-Hong-Jing(陶弘景) distinguished between Atractylodis Rhizoma Alba and Atractylodis Rhizoma at the very beginning, theri medicinal usages are different, Atractylodis Rhizoma have been used to remove pathogenic dampness in the digestive organs and Atractylodis Rhizoma Alba have been used to invigorate the digestive system and replenish qi. In additions, the figures and historical records of herbal appearance are different between Atractylodis Rhizoma Alba and Atractylodis Rhizoma. The diagnostics of them are in accord with the texonomic genealogies.

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Morphometric Study of Achyranthes bidentata Complex Using Numerical Taxonomy (수리분류를 이용한 쇠무릎 분류군의 외부형태 연구)

  • Ahn, Young Sup;Kim, Kwan Su;Kim, Hui
    • Korean Journal of Medicinal Crop Science
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    • v.20 no.6
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    • pp.466-471
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    • 2012
  • 'Usul' is a traditional medicinal herb, which has anti-inflammatory activities is distributed in India, Nepal, China, Korea, Japan. Korea pharmacopeia listed 'Usul' as either a species of Achyranthes japonica (Miq.) Nakai or A. bidentata Blume. Recent taxonomic studies in China and Japan delimited these taxa as two varieties, A. bidentata Blume var. bidentata and var. japonica Miq. A multivariate morphometric study of Achyranthes bidentata complex was undertaken to assess the entities of taxa that usefully could be recognized. Five quantitative characters were reviewed and analyzed with 293 specimens from Korea. The univariate analysis of inflorescence length, interval between florets, angle between floret and floral axis indicated that ranges among all taxa were continuous. However, quantitative characters of membrane size and the number of hairs within 4 were useful to identify two varieties. In PCA, the first three principal components accounted for 89.4% of the total variance. PCA revealed that var. bidentata showed distinctions in morphological attributes from var. japonica entity. Therefore, continued recognition at the infraspecifc level for these taxa is supported.

Taxonomic Review of the Genus Echinochloa in Korea (I): Inferred from Sequences of cpDNA and nrDNA

  • Lee, Jeongran;Kim, Chang-Seok;Lee, In-Yong
    • Weed & Turfgrass Science
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    • v.3 no.3
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    • pp.183-189
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    • 2014
  • The genus Echinochloa (L.) P. Beauv. comprised of approximately 30-40 species in the tropical and warm temperate regions of the world, including numerous interspecific and intraspecific types which make the genus difficult to identify. As an attempt to identify the species within the genus easier, the taxonomy of the genus Echinochloa, Poaceae in Korea was reviewed on the basis of sequencing data derived from nuclear ribosomal DNA internal transcribed spacer (ITS) and external transcribe spacer and chloroplast DNA trnL intron, trnL-F intergenic spacer and matK regions using a total of 46 accessions representing all the species in Korea. The results of maximum parsimony found separate lineage comprised of E. colona and E. frumentaceae which are not Korean species, but no resolution within Korean Echinochloa species, supporting the suggestion of Yamaguchi group that E. crus-galli, E. oryzoides, and E. esculenta should be considered to belong to the same species. However, the relationship between these three species and the other species, i.e. E. oryzicola should be better understood with more detail studies.

Taxonomic Studies on Cercospora and Allied Genera in Korea (I) (한국산 Cercospora 및 관련 속의 분류학적 연구 (I))

  • Kim, Jeong-Dong;Shin, Hyeon-Dong
    • The Korean Journal of Mycology
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    • v.26 no.3 s.86
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    • pp.327-341
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    • 1998
  • The mycoflora of Korea, especially the cercosporoid taxa, have been poorly studied in the past. For this reason, a systematic revision of these taxa has been initiated, with the eventual aim of producing a monograph of the Korean cercosporoid taxa. The present study circumscribes ten species; viz., Cercospora althaeina, C. arachidicola, C. armoraciae, C. carotae, C. ipomoeae, Mycovellosiella ferruginea, Passalora miurae, Pseudocercospora araliae, P. cannabina and P. vitis. Distinguishing morphological characteristics are described and illustrated for each species.

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First report of the lichen Ochrolechia akagiensis (Ochrolechiaceae, Ascomycota) in Korea

  • Park, Jung Shin;Oh, Soon-Ok;Woo, Jeong-Jae;Liu, Dong;Park, Sook-Young;Hur, Jae-Seoun
    • The Korean Journal of Mycology
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    • v.47 no.2
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    • pp.95-104
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    • 2019
  • The genus Ochrolechia is a widespread, lichen genus in Korea. Despite being common, little is known about the species diversity and geographical distribution of Ochrolechia. In this study, we detailed the identification procedure of the genus Ochrolechia in a Korean collection and provided the description of each species. Using 104 specimens collected from 2003 to 2017, we identified four species of the genus Ochrolechia via morphological and/or molecular phylogenetic analysis: O. parellula, O. trochophora, O. yasudae and O. akagiensis. Among them, O. akagiensis had not been previously reported in Korea. Moreover, the species identified as O. frigida and O. tartarea in past studies were corrected as O. yasudae and O. parellula, respectively, based on morphological and/or molecular evidence. Phylogenetic analysis using the internal transcribed spacer regions including 5.8S rRNA gene showed that the four species separated clearly, indicating that the morphological identification corresponds to the phylogenetic identification. We provide a taxonomic key for the four species of the genus Ochrolechia.

Genetic variation of COI gene of the Korean medicinal centipede Scolopendra mutilans Koch, 1878 (Scolopendromorpha: Scolopendridae)

  • HAN, Taeman;LEE, Young Bo;KIM, Seung-Hyun;YOON, Hyung Joo;PARK, In Gyun;PARK, Haechul
    • Entomological Research
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    • v.48 no.6
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    • pp.559-566
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    • 2018
  • In Korea, the centipede called "Wang-ji-ne" or "O-gong" is used as an important medicinal resource. This centipede has been known as Scolopendra subspinipes mutilans Koch 1878. Recent studies have assessed its taxonomic treatment in several geographical populations from China, Japan and Taiwan, but not Korea. We therefore attempted to assess exact species status for the Korean population of this subspecies using both morphological and DNA barcode methods. The result inferred from DNA barcoding showed that the Korean population is S. mutilans explicitly separated from S. subspinipes. Within S. mutilans, the Korean population is morphologically identical and genetically closer to the Chinese population rather than island populations of Japan and Taiwan. Particularly, the mainland populations from Korea and China share six haplotypes from 17 despite being far apart geographically.

Benefits of procyanidins on gut microbiota in Bama minipigs and implications in replacing antibiotics

  • Zhao, Tingting;Shen, Xiaojuan;Dai, Chang;Cui, Li
    • Journal of Veterinary Science
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    • v.19 no.6
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    • pp.798-807
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    • 2018
  • Several studies have reported the effect of absorption of procyanidins and their contribution to the small intestine. However, differences between dietary interventions of procyanidins and interventions via antibiotic feeding in pigs are rarely reported. Following 16S rRNA gene Illumina MiSeq sequencing, we observed that both procyanidin administration for 2 months (procyanidin-1 group) and continuous antibiotic feeding for 1 month followed by procyanidin for 1 month (procyanidin-2 group) increased the number of operational taxonomic units, as well as the Chao 1 and ACE indices, compared to those in pigs undergoing antibiotic administration for 2 months (antibiotic group). The genera Fibrobacter and Spirochaete were more abundant in the antibiotic group than in the procyanidin-1 and procyanidin-2 groups. Principal component analysis revealed clear separations among the three groups. Additionally, using the online Molecular Ecological Network Analyses pipeline, three co-occurrence networks were constructed; Lactobacillus was in a co-occurrence relationship with Trichococcus and Desulfovibrio and a co-exclusion relationship with Bacillus and Spharerochaeta. Furthermore, metabolic function analysis by phylogenetic investigation of communities by reconstruction of unobserved states demonstrated modulation of pathways involved in the metabolism of carbohydrates, amino acids, energy, and nucleotides. These data suggest that procyanidin influences the gut microbiota and the intestinal metabolic function to produce beneficial effects on metabolic homeostasis.

DNA Barcoding of Benthic Ragworms of the Genus Nectoneanthes (Polychaeta: Nereididae) Collected in Korean Waters

  • Park, Taeseo
    • Animal Systematics, Evolution and Diversity
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    • v.37 no.3
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    • pp.235-241
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    • 2021
  • To provide better taxonomic information of the genus Nectoneanthes, the two DNA barcode regions of mitochondrial cytochrome c oxidase subunit I (COI) and 16S ribosomal DNA (rDNA) sequences of Nectoneanthes oxypoda and N. uchiwa were determined. In addition, the respective sequences of four nereidid species closely related to Nectoneanthes were retrieved from GenBank for comparison and to estimate intra- and inter-specific genetic distances. The aligned sequence lengths of COI and 16S rDNA were 570 bp and 419 bp long, respectively. The mean intraspecific variation in both markers was less than 1% in all species except for that in COI of H. diadroma (1.87%). The mean interspecific variation between N. oxypoda and N. uchiwa was 12.02% regarding COI and 1.85% regarding 16S rDNA. In contrast, the mean interspecific variation between species of other genera was comparably higher(i.e., genus Perinereis: 20.5% in COI and 8.3% in 16S rDNA; genus Hediste: 13.18% in COI and 2.64% in 16S rDNA), compared with that between the two Nectoneanthes species. This result indicated that these Nectoneanthes species are genetically more closely related than other congeneric species of different genera. The DNA barcoding information on Nectoneanthes species generated in this study provides valuable insights for further biodiversity studies on nereidid species.