• Korean Journal of Plant Resources
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• v.26 no.4
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• pp.457-462
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• 2013

Molecular study were conducted to evaluate taxonomic identities of Echinochloa crus-galli (L.) Beauv. and Echinochloa crus-galli var. echinata (Willd.) Honda in Dokdo. Echinochloa crus-galli complex of two species 26 individuals analyse based on nuclear ribosomal DNA (ITS region) and cpDNA (trnH-psbA, trnL-F). At a result, two species were same sequence. Characters the length of the lemma and the length of the awn traits were identity of the species was unclear. According to, Taxonomy treatments that is based on existent morphological characters should thinks again. On the other hand, in the case of ITS, Echinochloa crus-galli (L.) Beauv. and Echinochloa crus-galli var. echinata (Willd.) Honda at the Dokdo forms from other clades with individuals that is collected at land area and Ulleungdo. These result is showing that is flowing independent evolution trends.

• The Plant Pathology Journal
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• v.18 no.3
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• pp.109-114
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• 2002

To evaluate the phylogenetic and taxonomic status of the phytoplasmas associated with water dropwort (Oenanthe javanica DC) disease in Korea and Japan, their 16S rDNA was analyzed. DNAs extracted from water dropworts collected in Korea (Kyongnam province) and Japan (Chiba prefecture) affected by witches' broom and yellows were subjected to PCR using phytoplasma-specific primers, which amplified a 1.4-kbp fragment that included the 16S rDNA. Phytoplasmas were characterized by RFLP analysis using AluI, HaeIII, HhaI, KpnI, MseI, and RsaI restriction enzymes and by sequence analysis of the PCR products. The mater dropwort witches'broom (WDWB) and water dropwort yellows (WDY) 16S rDNA sequences were identical and closely related to onion yellows (OY, 99.9% identity), which belong to the aster yellows (AY) 16S-subgroup. However, the KpnI RFLP analyses clearly distinguished the WDY and WDWB phytoplasmas from the OY phytoplasma. The phylogenetic analysis based on 16S rDNA showed that WDWE and WDY phytoplasmas are members of a relatively homogeneous group that evolved from a common ancestor.

• Korean Journal of Plant Taxonomy
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• v.45 no.2
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• pp.136-144
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• 2015

We reviewed the taxonomic identity and morphological characteristics of Cardamine manshurica (Kom.) Nakai based on its original description and type specimens. Cardamine manshurica, with its smaller flowers and siliques and earlier flowering season, is distinguished from the closely related species C. flexuosa With. This species-level difference is additionally supported in a phylogenetic tree constructed using nrDNA ITS sequences. Taken together, we therefore propose that C. manshurica is a distinct species. The scientific name 'Cardamine manshurica (Kom.) Nakai' is accepted.

• Mycobiology
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• v.49 no.3
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• pp.235-248
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• 2021

This study aimed to understand whether the geo-ecological segregation of native plant species affects the root-associated fungal community. Rhizoplane (RP) and rhizosphere (RS) fungal microbiota of Sedum takesimense native to three geographically segregated coastal regions (volcanic ocean islands) were analyzed using culture-independent methods: 568,507 quality sequences, 1399 operational taxonomic units, five phyla, and 181 genera were obtained. Across all regions, significant differences in the phyla distribution and ratio were confirmed. The Chao's richness value was greater for RS than for RP, and this variance coincided with the number of genera. In contrast, the dominance of specific genera in the RS (Simpson value) was lower than the RP at all sites. The taxonomic identity of most fungal species (95%) closely interacting with the common host plant was different. Meanwhile, a considerable number of RP only residing fungal genera were thought to have close interdependency on their host halophyte. Among these, Metarhizium was the sole genus common to all sites. These suggest that the relationship between potential symbiotic fungi and their host halophyte species evolved with a regional dependency, in the same halophyte species, and of the same natural habitat (volcanic islands); further, the fungal community differenced in distinct geographical regions. Importantly, geographical segregation should be accounted for in national culture collections, based on taxonomical uniqueness.

• Korean Journal of Plant Taxonomy
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• v.50 no.2
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• pp.232-238
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• 2020

The identity of Dioscorea coreana (Prain & Burkill) R. Kunth is recognized during the re-identification process of Korean Dioscorea specimens. Given the relatively few pieces of information, including few descriptions and research papers, this species has been misidentified as D. tokoro, which has a similar leaf shape, but D. coreana is distinguished from D. tokoro by the absence of a pedicel in the male flower, the green color of the tepal, and the shapes of the fruit and seed. Thus, detailed descriptions, illustrations, and photographs of D. coreana and a key to the Korean Dioscorea, including this species, are presented.

• Korean Journal of Plant Taxonomy
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• v.38 no.4
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• pp.477-502
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• 2008

Morphological characters of inflorescence, spikelet, rachilla, glume, lemma and palea about 17 taxa of Korean Poa L. were investigated to evaluate their taxonomic significances. The bulbil present or not, inflorescence shape, callus shape of lemma and surface shape of palea were thought to be the subgenus characters. The keels shapes of palea, the number of lower glume, lateral nerve shape of lemma were thought to be the section characters. The number of floret, rachilla present or not, the number of lower glume, nerve shape of glume, surface shape of lemma were thought to be the species characters. Consequently, 17 taxa of the Korean Poa L. is classified into 3 subgenus (Ochlopoa, Stenopoa, Stenopoa), 7 section(Arenariae, Ochlopoa, Homalopoa, Poa, Pandemos, Tichopoa, Stenopoa). 6 taxa, P. ullungdoensis, P. takeshimana and P. matsumurae, P. nipponica, P. radula, P. viridula, not included in the existing classification system, were suggested to their taxonomic category in infragenic rank, and P. nemoralis, had been included in section Stenopoa of subgenus Stenopoa, was proposed to move to section Poa of subgenus Poa. P. ullungdoensis, reported as new species in 1955, was grasped its taxonomic identity.

• Korean Journal of Plant Taxonomy
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• v.41 no.3
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• pp.209-214
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• 2011

The taxonomy of the umbelliferous species Angelica amurensis and its allies was reviewed on the basis of molecular phylogenies derived from sequences of nuclear ribosomal DNA internal transcribed spacer (ITS) regions. Strict consensus of six minimal length 119-step trees derived from equally weighted maximum parsimony analysis of combined nuclear rDNA ITS1 and ITS2 sequences from 29 accessions of Angelica and outgroups indicated that Angelica purpuraefolia, known to be endemic to Korea, is the same species as A. amurensis. Comparisons of sequence pairs across both spacer regions revealed identity or 1-2 bp differences between A. purpuraefolia and A. amurensis. These results indicated that the two taxa are not distinguished taxonomically. Also, nuclear rDNA ITS regions are discussed as potential barcoding loci for identifying Korean Angelica.

• Animal cells and systems
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• v.13 no.1
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• pp.31-47
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• 2009

Twelve Far Eastern species of the genus Ancistrocerus Wesmael are taxonomically reviewed. Among them, Ancistrocerus coreanus Kim and Yamane is new to science. A. japonicus, A. parietum and A. scoticus are newly recorded from Korea. In comparison to A. melanocerus, our opinion on the identity of A. densepilosellus is presented: it is more supportive that the Far Eastern population is the latter. Revised key, description, recognition characteristics and digital images for all the treated species are provided.

• Animal cells and systems
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• v.12 no.4
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• pp.249-259
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• 2008

A new laophontid copepod species, Apolethon articulatus n. sp., is described from the estuaries and salt marshes in South Korea. Apolethon articulatus is similar to the three congeneric species currently known in sharing the character combination of the elongate first endopodal segment of leg 1 with inner seta and the expansion of second endopodal segments of legs 2-4 with decrease in the number of setae on them. However, A. articulatus differs from them by the separate exopod of female leg 5 and the armature of mandibular palp with 6 setae. Description and taxonomic accounts of the new species are presented herein with detailed illustrations and SEM micrographs. As the true identity of the rarely known genus has not been clarified yet, a revised generic diagnosis is provided with a key to the species hitherto known in the genus.

• Mycobiology
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• v.48 no.4
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• pp.321-325
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• 2020

A Colletotrichum species was isolated from leaves of Cymbidium exhibiting symptoms of anthracnose. In this study, the isolates obtained were identified based on recent taxonomic approaches for the genus Colletotrichum. The identity of the causal pathogen was confirmed using morphological data and phylogenetic analysis of combined multi-gene dataset (internal transcribed spacer, glyceraldehyde 3-phosphate dehydrogenase, chitin synthase-1, actin, histone3, beta-tubulin, and calmodulin). Pathogenicity testing revealed that the isolates were pathogenic to Cymbidium. Based on these results, the fungal pathogen occurring on Cymbidium orchids was identified as Colletotrichum cymbidiicola, which is a newly recorded species in Korea.