• Title/Summary/Keyword: spike train decoding

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Neuronal Spike Train Decoding Methods for the Brain-Machine Interface Using Nonlinear Mapping (비선형매핑 기반 뇌-기계 인터페이스를 위한 신경신호 spike train 디코딩 방법)

  • Kim, Kyunn-Hwan;Kim, Sung-Shin;Kim, Sung-June
    • The Transactions of the Korean Institute of Electrical Engineers D
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    • v.54 no.7
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    • pp.468-474
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    • 2005
  • Brain-machine interface (BMI) based on neuronal spike trains is regarded as one of the most promising means to restore basic body functions of severely paralyzed patients. The spike train decoding algorithm, which extracts underlying information of neuronal signals, is essential for the BMI. Previous studies report that a linear filter is effective for this purpose and there is no noteworthy gain from the use of nonlinear mapping algorithms, in spite of the fact that neuronal encoding process is obviously nonlinear. We designed several decoding algorithms based on the linear filter, and two nonlinear mapping algorithms using multilayer perceptron (MLP) and support vector machine regression (SVR), and show that the nonlinear algorithms are superior in general. The MLP often showed unsatisfactory performance especially when it is carelessly trained. The nonlinear SVR showed the highest performance. This may be due to the superiority of the SVR in training and generalization. The advantage of using nonlinear algorithms were more profound for the cases when there are false-positive/negative errors in spike trains.

Performance Evaluation of Cochlear Implants Speech Processing Strategy Using Neural Spike Train Decoding (Neural Spike Train Decoding에 기반한 인공와우 어음처리방식 성능평가)

  • Kim, Doo-Hee;Kim, Jin-Ho;Kim, Kyung-Hwan
    • Journal of Biomedical Engineering Research
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    • v.28 no.2
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    • pp.271-279
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    • 2007
  • We suggest a novel method for the evaluation of cochlear implant (CI) speech processing strategy based on neural spike train decoding. From formant trajectories of input speech and auditory nerve responses responding to the electrical pulse trains generated from a specific CI speech processing strategy, optimal linear decoding filter was obtained, and used to estimate formant trajectory of incoming speech. Performance of a specific strategy is evaluated by comparing true and estimated formant trajectories. We compared a newly-developed strategy rooted from a closer mimicking of auditory periphery using nonlinear time-varying filter, with a conventional linear-filter-based strategy. It was shown that the formant trajectories could be estimated more exactly in the case of the nonlinear time-varying strategy. The superiority was more prominent when background noise level is high, and the spectral characteristic of the background noise was close to that of speech signals. This confirms the superiority observed from other evaluation methods, such as acoustic simulation and spectral analysis.

Performance Evaluation of Speech Onset Representation Characteristic of Cochlear Implants Speech Processor using Spike Train Decoding (Spike Train Decoding에 기반한 인공와우 어음처리기의 음성시작점 정보 전달특성 평가)

  • Kim, Doo-Hee;Kim, Jin-Ho;Kim, Kyung-Hwan
    • Journal of Biomedical Engineering Research
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    • v.28 no.5
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    • pp.694-702
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    • 2007
  • The adaptation effect originating from the chemical synapse between auditory nerve and inner hair cell gives advantage in accurate representation of temporal cues of incoming speech such as speech onset. Thus it is expected that the modification of conventional speech processing strategies of cochlear implant(CI) by incorporating the adaptation effect will result in considerable improvement of speech perception performance such as consonant perception score. Our purpose in this paper was to evaluate our new CI speech processing strategy incorporating the adaptation effect by the observation of auditory nerve responses. By classifying the presence or absence of speech from the auditory nerve responses, i. e. spike trains, we could quantitatively compare speech onset detection performances of conventional and improved strategies. We could verify the effectiveness of the adaptation effect in improving the speech onset representation characteristics.

Neuroscience I : neural encoding and decoding (신경과학 I : 신경신호 인코딩과 디코딩)

  • Lee, Ho-Suk
    • Proceedings of the Korean Information Science Society Conference
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    • 2006.10a
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    • pp.59-62
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    • 2006
  • 전산 신경과학은 신경 시스템을 생물물리학, 신경회로, 그리고 시스템 레벨 등 여러 가지 관점에서 크기와 구조를 모델링하여 신경 신호의 전달과 전달되는 정보의 내용을 이해하고자 하는 분야이다. 전산 신경과학은 기존의 생물학적인 신경과학 연구에 대한 보완적인 연구방법으로 이론적이고 계산적인 방법을 사용한다. 본 논문에서는 신경 세포에서 반응 인코딩에 해당되는 신호 발생율(firing rate)과 스파이크 통계(spike statistics)를 설명하고, 신경 세포에서 반응 디코딩에 해당되는 스파이크-트레인 디코딩(spike-train decoding)에 대하여 설명한다.

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Accurate Representation of Light-intensity Information by the Neural Activities of Independently Firing Retinal Ganglion Cells

  • Ryu, Sang-Baek;Ye, Jang-Hee;Kim, Chi-Hyun;Goo, Yong-Sook;Kim, Kyung-Hwan
    • The Korean Journal of Physiology and Pharmacology
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    • v.13 no.3
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    • pp.221-227
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    • 2009
  • For successful restoration of visual function by a visual neural prosthesis such as retinal implant, electrical stimulation should evoke neural responses so that the informat.ion on visual input is properly represented. A stimulation strategy, which means a method for generating stimulation waveforms based on visual input, should be developed for this purpose. We proposed to use the decoding of visual input from retinal ganglion cell (RGC) responses for the evaluation of stimulus encoding strategy. This is based on the assumption that reliable encoding of visual information in RGC responses is required to enable successful visual perception. The main purpose of this study was to determine the influence of inter-dependence among stimulated RGCs activities on decoding accuracy. Light intensity variations were decoded from multiunit RGC spike trains using an optimal linear filter. More accurate decoding was possible when different types of RGCs were used together as input. Decoding accuracy was enhanced with independently firing RGCs compared to synchronously firing RGCs. This implies that stimulation of independently-firing RGCs and RGCs of different types may be beneficial for visual function restoration by retinal prosthesis.

Estimation of Visual Stimulus Intensity From Retinal Ganglion Cell Spike Trains Using Optimal Linear Filter (최적선형필터를 이용한 망막신경절세포 Spike Train으로부터의 시각자극 세기 변화 추정)

  • Ryu, Sang-Baek;Kim, Doo-Hee;Ye, Jang-Hee;Kim, Kyung-Hwan;Goo, Yong-Sook
    • Journal of Biomedical Engineering Research
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    • v.28 no.2
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    • pp.212-217
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    • 2007
  • As a preliminary study for the development of electrical stimulation strategy of artificial retina, we set up a method fur the reconstruction of input intensity variation from retinal ganglion cell(RGC) responses. In order to estimate light intensity variation, we used an optimal linear filter trained from given stimulus intensity variation and multiple single unit spike trains from RGCs. By applying ON/OFF stimulation(ON duration: 2 sec, OFF duration: 5 sec) repetitively, we identified three functional types of ganglion cells according to when they respond to the ON/OFF stimulus actively: ON cell, OFF cell, and ON-OFF cell. Experiments were also performed using a Gaussian random stimulus and a binary random stimulus. The input intensity was updated once every 90 msec(i. e. 11 Hz) to present the stimulus. The result of reconstructing 11 Hz Gaussian and binary random stimulus was not satisfactory and showed low correlation between the original and reconstructed stimulus. In the case of ON/OFF stimulus in which temporal variation is slow, successful reconstruction was achieved and the correlation coefficient was as high as 0.8.