• 제목/요약/키워드: specific probe

검색결과 434건 처리시간 0.028초

Discovery of Novel RNA Targets Using Chemical Genomics

  • Yu, Jae-Hoon
    • 대한약학회:학술대회논문집
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    • 대한약학회 2003년도 Proceedings of the Convention of the Pharmaceutical Society of Korea Vol.2-1
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    • pp.93-93
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    • 2003
  • RNA plays an important role in numerous biological processes but little is known about the interactions between small organic molecules and RNA. Our previous work has shown that the heterodimeric compound designed by conjugation with neomycin and loop-specific chemical bind to the stem-loop structured RNA motifs. In the present study, heterodimer was used, in a reverse way, as a probe to identify structured RNA motifs. (omitted)

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A 16S rDNA polymerase chain reaction assay to detect Mycoplasma pulmonis in rats model

  • Hong, Sunhwa;Lee, Hyun-A;Choi, Yeon-Shik;Chung, Yungho;Kim, Okjin
    • 한국동물위생학회지
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    • 제38권2호
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    • pp.101-106
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    • 2015
  • Murine mycoplasmosis, caused by Mycoplasma (M.) pulmonis, is a prominent disease in rodent animals. The aim of this study was to develop a sensitive and specific PCR assay to detect M. pulmonis in animals and to assess the suitability of this assay for the detection of mycoplasmal infection in rats experimentally infected with M. pulmonis. A new PCR assay using the M. pulmonis-specific primer pairs MPul-F and MPul-R was developed. The primers and probe for the assay were designed from regions in the 16S rRNA gene that are unique to M. pulmonis. The novel PCR assay was very specific and sensitive for M. pulmonis, detecting the equivalent of 5 pg of target template DNA. It detected only M. pulmonis and no other Mycoplasma species or other bacterial species. The newly developed PCR assay also effectively detected M. pulmonis infection in rats. These results suggest that this PCR assay using M. pulmonis-specific primer pairs of MPul-F and MPul-R will be useful and effective for monitoring M. pulmonis infection in animals.

Roles of Nickel Layer Deposition on Surface and Electric Properties of Carbon Fibers

  • Kim, Byung-Joo;Choi, Woong-Ki;Bae, Kyong-Min;Moon, Cheol-Whan;Song, Heung-Sub;Park, Jong-Kyoo;Lee, Jae-Yeol;Im, Seung-Soon;Park, Soo-Jin
    • Bulletin of the Korean Chemical Society
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    • 제32권5호
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    • pp.1630-1634
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    • 2011
  • Electroless plating of metallic nickel on carbon fiber surfaces was carried out to control specific electric resistivity of the fibers, and the effects of the nickel content and coating thickness on the electric properties were studied. The structural and surface properties of the carbon fibers were characterized using X-ray diffraction (XRD), scanning electron microscopy (SEM), and X-ray photoelectron spectroscopy (XPS). The specific resistivity of the fibers was measured using a four-point probe testing method. From the XPS results, the oxygen and Ni atomic ratio of the fibers was greatly enhanced as the plating time increased. Additionally, it was observed that the specific electric resistivity decreased considerably in the presence of metallic nickel particles and with the formation of nickel layers on carbon fibers.

Quantification of Genetically Modified Canola GT73 Using TaqMan Real-Time PCR

  • Kim, Jae-Hwan;Song, Hee-Sung;Kim, Dong-Hern;Kim, Hae-Yeong
    • Journal of Microbiology and Biotechnology
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    • 제16권11호
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    • pp.1778-1783
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    • 2006
  • Event-specific PCR detection methods are the primary trend in genetically modified (GM) plant detection owing to their high specificity based on the flanking sequence of the exogenous integrant. Therefore, this study describes a real-time PCR system for event-specific GM canola GT73, consisting of a set of primers, TaqMan probe, and single target standard plasmid. For the specific detection of GT73 canola, the 3'-integration junction sequence between the host plant DNA and the integrated specific border was targeted. To validate the proposed method, test samples of 0, 1, 3, 5, and 10% GT73 canola were quantified. The method was also assayed with 15 different plants, and no amplification signal was observed in a real-time PCR assay with any of the species tested, other than GT73 canola.

Behavior of Rotating Stall Cell in a High Specific-Speed Diagonal Flow Fan

  • Shiomi, Norimasa;Cai, W.X.;Muraoka, A.;Kaneko, K.;Setoguchi, T.
    • Journal of Mechanical Science and Technology
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    • 제15권12호
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    • pp.1860-1868
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    • 2001
  • An experimental investigation was carried out to clarify unsteady flow fields with rotating stall cell, especially behavior of stall cell, in a high specific-speed diagonal flow fan. As its specific-speed is vary high for a diagonal flow fan, its pressure-flow rate curve tends to indicate unstable characteristics caused by rotating stall similar to axial flow fan. Although for an axial flow fan many researchers have investigated such the flow field, for a diagonal flow fan tittle study has been done. In this study, velocity fields at rotor Inlet in a high specific-speed diagonal flow fan were measured by use of a single slant hot-wire probe. These data were processed by using the "Double Phase-Locked Averaging"(DPLA) technique, i. e. phases of both the rotor blade and the stall cell were taken into account. The behaviors of stall cell at rotor inlet were visualized for the meridional, tangential and radial velocity.

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Detection of cryIB Genes in Bacillus thuringiensis subsp. entomocidus and subsp. subtoxicus

  • CHOI, SOO KEUN;BYUNG SIK SHIN;BON TAG KOO;SEUNG HWAN PARK;AND JEONG IL KIM
    • Journal of Microbiology and Biotechnology
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    • 제4권3호
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    • pp.171-175
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    • 1994
  • To find new crystal protein genes, we screened 42 Bacillus thuringiensis strains of serovar standards by Southern hybridization with a cryI-specific probe which was amplified from B. thuringiensis subsp. kurstaki HDl by polymerase chain reaction (PCR). Two strains, B. thuringiensis subsp. entomocidus HD9 and subsp. subtoxicus HD109, generated weak signals under the low-stringency hybridization conditions. Further analysis with Southern hybridization revealed that the two strains contained cryIB genes which are slightly different from those of B. thuringiensis subsp. thuringiensis HD2. These results were confirmed by PCR with cryIB-specific primers followed by the restriction analysis of PCR products.

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The targeting peptides for tumor receptor imaging

  • Yim, Min Su;Ryu, Eun Kyoung
    • 대한방사성의약품학회지
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    • 제2권2호
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    • pp.63-68
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    • 2016
  • Peptides have been developed for in vivo imaging probes against to the specific biomarker in the biological process of living systems. Peptide based imaging probes have been applied to identify and detect their active sites using imaging modalities, such as PET, SPECT and MRI. Especially, tumor receptor imaging with the peptides has been widely used to specific tumor detection. This review discusses the targeting peptides that have been successfully characterized for tumor diagnosis by receptor imaging.

3차원 좌표측정기의 기어측정능력평가를 위한 실험적 연구 (A Study on the Evaluation of the Gear Measurement Capability of a 3 Dimensional Coordinate Measuring Machine)

  • 심창건;변재현
    • 산업공학
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    • 제12권2호
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    • pp.180-192
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    • 1999
  • A coordinate measuring machine (CMM) is a computer-controlled measuring device that uses a probe to obtain measurements on a manufactured part's surface. CMM's have been very popular over traditional hard gauges due to their flexibility, accuracy, and ease of automated inspection. This paper considers the use of a CMM for the inspection of gears. We compare the inspection capability of a CMM and that of a gear-specific measuring machine. The result of this paper may benefit gear manufacturing companies in their dimensional quality assurance activities, especially for special type gears and for large-scale gears which are not measurable by gear-specific measuring machines.

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Secondary Structure for RNA Aptamers Binding to Guanine-Rich Sequence in the 5'-UTR RNA of N-Ras Oncogene

  • Cho, Bongrae
    • 대한화학회지
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    • 제65권2호
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    • pp.121-124
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    • 2021
  • RNA molecules which bind to the G-rich sequence in the 5'-UTR RNA which plays an important role in expression of N-ras, were selected. The secondary structures of five selected RNA aptamers including primer sequence were found by the CLC RNA workbench ver. 4.2 program (www.clcbio.com) and investigated with RNA structural probes such as RNase T1 which has specificity for a G in single-stranded region, RNase V1 specific for double strand and nuclease S1 specific for single strand. The generalized secondary structure model was proposed and characterized. It was composed of a central long double strand region flanked by single strand region at both end sides. The double strand region had an internal single-strand region and bulges. The single strand loop in the right side was composed of four or five nucleotides.

Development of DNA Microarray for Pathogen Detection

  • Yoo, Seung Min;Keum, Ki Chang;Yoo, So Young;Choi, Jun Yong;Chang, Kyung Hee;Yoo, Nae Choon;Yoo, Won Min;Kim, June Myung;Lee, Duke;Lee, Sang Yup
    • Biotechnology and Bioprocess Engineering:BBE
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    • 제9권2호
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    • pp.93-99
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    • 2004
  • Pathogens pose a significant threat to humans, animals, and plants. Consequently, a considerable effort has been devoted to developing rapid, convenient, and accurate assays for the detection of these unfavorable organisms. Recently, DNA-microarray based technology is receiving much attention as a powerful tool for pathogen detection. After the target gene is first selected for the unique identification of microorganisms, species-specific probes are designed through bioinformatic analysis of the sequences, which uses the info rmation present in the databases. DNA samples, which were obtained from reference and/or clinical isolates, are properly processed and hybridized with species-specific probes that are immobilized on the surface of the microarray for fluorescent detection. In this study, we review the methods and strategies for the development of DNA microarray for pathogen detection, with the focus on probe design.