• Title/Summary/Keyword: species relationship

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Molecular Authentication of Scrophularia herbs by PCR-RFLP Based on rpl-5 Region of Mitochondrial DNA (현삼속 식물의 종판별을 위한 Mitochondrial DNA의 염기서열 및 PCR-RFLP 분석)

  • Lee, Jeong-Hoon;Jo, Ick-Hyun;Lee, Jei-Wan;Park, Chun-Geun;Bang, Kyong-Hwan;Kim, Hong-Sig;Park, Chung-Berm
    • Korean Journal of Medicinal Crop Science
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    • v.18 no.3
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    • pp.173-179
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    • 2010
  • This study describes an efficient approach to the development of DNA markers for use in distinguishing the Scrophularia species that have been used as useful medicinal crops. In order to distinguish Scrophularia species, DNA sequences of rpl-5 region in mitochondrial DNA of Scrophularia species were analysed for detecting sequence variations, and the PCR-RFLP method was applied for developing practicable DNA marker patterns. Several DNA variations were detected by the sequence comparison of rpl-5 region among Scrophularia species. Genetic relationship analysis of Scrophularia species was carried out based on these DNA variations. DNA variations of rpl-5 region were revealed that it was significantly efficient in genetic relationship analysis of Scrophularia species. In addition, Scrophularia species tested in this study were completely discriminated by four polymorphic genotypes by PCR-RFLP combined with Tsp509 I (^AATT) restriction enzyme. Our results suggested that DNA sequence variations of rpl-5 region were sufficiently useful for genetic relationship analysis of Scrophularia species. Polymorphic genotypes by PCR-RFLP using the Tsp509 I enzyme will be useful for discrimination of Scrophularia species as a practicable DNA markers.

Analysis of the characteristics of the environment and fish community in the Gwanggyo Lake Park area using the environmental DNA technique (환경 DNA 기법을 활용한 광교호수공원 일대의 시기 및 수환경 특성별 어류상 분석)

  • Won, Su-Yeon;Kang, Yu-Jin;Song, Young-Keun
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.25 no.5
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    • pp.77-88
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    • 2022
  • This study aims to understand the relationship between the distribution of fish species in the two water ecosystems and the habitat factors according to the survey period targeting Gwanggyo Lake Park in the city. There are studies on the appearance and distribution of species by applying eDNA to freshwater ecosystems. However, in the domestic, streams are the target, and studies on the relationship between species distribution and habitat environment in two water environments are lacking. We conducted to analyze the species list and relationship with habitat factors using eDNA research in May and October at 21 points in Gwanggyo Lake Park, Suwon City, which were connected to lakes and streams. As a result, there was no species difference in the water environment according to the survey period. However, the total number of reads during the spawning season(May) was 3,126,482, which was more than double that after the spawning season(October). Tolerant species appeared in Woncheon Lake with a slow or stagnant flow, but there was no significant correlation between species and habitat factors depending on the survey period. On the other hand, intermediate and sensitive species appeared in the Woncheon stream with high flow. There was a significant correlation between the low temperature during the spawning season and the high dissolved oxygen content after the spawning season(P<0.001, Tem.: 20.7±2.6℃, DO: 8.6±1.7). It is expected that environmental DNA will be used to survey species and suggest monitoring methods according to the survey period.

Genetic Divergence and Relationship Among Four Abalone Species by Isozyme and AFLP analyses (Isozyme 및 AFLP분석에 의한 전복류 4종간의 유전적 차이 및 유연관계)

  • Park Choul-ji;Kijima Akihiro
    • Journal of Aquaculture
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    • v.18 no.4
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    • pp.252-259
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    • 2005
  • Isozyme and AFLP analyses were examined to estimate the utilities of them as a genetic marker. The utilities were evaluated by genetic divergence and relationships among the four distinct abalone species; Haliotis discus hannai collected from northeast coast of Japan and Yellow-Sea coast of China, H. rufescens collected from west coast of USA, H rubra collected from southeast coast of Australia and H midae collected from Cape Town of South Africa. Isozyme and AFLP analyses showed a clear genetic divergence between every pair of species. Genetic relationships among the low species estimated by isozyme and AFLP analyses reflected to geographical distribution and morphological characteristics. In conclusion, Isozyme and AFLP analyses are suitable genetic markers far estimates of genetic divergence and relationship among abalone species.

Biological aspects of roundscads (Decapterus spp.) inhabiting the waters of Southeast Maluku, Eastern Indonesia

  • Pattikawa Jesaja Ajub;Mamesah Julieta Adriana Bertha;Tetelepta Johannes Marten Stephan;Natan Yuliana;Pietersz Janson Hans
    • Fisheries and Aquatic Sciences
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    • v.26 no.3
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    • pp.224-233
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    • 2023
  • This research was conducted at Langgur City, Southeast Maluku Regency, Maluku Province, Eastern Indonesia from November 2020 to February 2021 to study biological aspects of roundscads (Decapterus spp.) which consist of species composition, sex ratio, gonad maturation level, size distribution, length-weight relationship and condition factor. Samples were collected at traditional fish market in Langgur City. Fish samples collected at the market were put into cool box and then brought to the laboratory for further examination. Fish samples were identified, separated based on species, dissected to determine their sex and gonad maturation stage and then measured. Totally, there were 290 specimen collected which consist of five species namely Decapterus kurroides, D. macarellus, D. macrosoma, D. muroadsi and D. russelli. Sex ratio between male and female for all species showed 1:1. Gonad maturation level showed that stage I and II have higher percentage than stage III and IV indicates immature fish more dominant compare to mature one. Among five species found, D. macarellus has larger size while the smaller belongs to D. muroadsi. Results of length-weight relationship analysis showed that roundscads inhabiting Southeast Maluku waters have isometric and negative allometric growth pattern with relative condition factor around 1.00.

The Grassland Type in Korea (한국의 초지형)

  • 박봉규
    • Journal of Plant Biology
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    • v.9 no.3_4
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    • pp.7-13
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    • 1966
  • The investigation on the grassland type was conducted by the data in the previous these (Park 1963, '64, '65, '66). The results obtained are as follows; 1) I defined that the relationship between the valves of DS and the main species of the grass in Korea(Table Ⅰ) Grassland Stage ; Waste type………6 community-types Short grass type………3 community-types Pteridium type………1 community-types Tall grass type………4 community-types Sasamorpha type………1 community-types Shrubby Stage; Lespedeza type Pioneer tree type………6 species Forest Stage; Deciduous broad leave tree type………6 species Evergreen broad leaved tree type………3 species Evergreen needle leaved tree type………7 species 2) I defined; that the relationship between the valves of DS and the grassland type in Korea(Table 2). Of grassnland type, the range of valves of DS, 50-220 belongs to waste type; 130-310 short grass type; 230-640 tall grass type; 210-450 pteridium type; 510-970 sasamorpha type; 730-1450 shrubby type; 3) I decided; The succession stage centering on the Sasamorpha purpuracens in Korea(Table 3). 4) I decided the climate type and the grassland succession in Korea(Table 4).

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Variation and Relationship between Standing Crops and Biomass of Phytoplankton Dominant Species in the Marine Ranching Ground of Tongyeong Coastal Waters from 2000 to 2007 (2002-2007년 통영바다목장해역에서 식물플랑크톤 현존량 및 생체량에 따른 우점종의 변동 및 관계)

  • Jung, Seung-Won;Kwon, Oh-Youn;Lee, Jin-Hwan
    • ALGAE
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    • v.23 no.1
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    • pp.53-61
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    • 2008
  • In order to understand variation and relationship between standing crops and biomass of phytoplankton dominant species for the long term periods, this study was seasonally investigated in the marine ranching ground of Tongyeong coastal waters from 2000 to 2007. Total 268 taxa representing 217 Bacillariophyceae, 46 Dinophyceae, 4 Dictychophyceae, 1 Euglenophyceae were observed in phytoplankton communities. Dominant species consisted of 5 species as standard in standing crops: Chaetoceros curvisetus (18.01%), Chaetoceros socialis (12.95%), Skeletonema costatum (8.39%), Chaetoceros compressus (6.87%), Asterionellopsis glacialis (5.02%). However, to determine dominant species as biomass concept, Ditylum brightwellii, Guinardia striata, Rhizosolenia spp. and Skeletonema costatum were occupied with dominant species (19.67%). As determining for cell sizes, dominant species were divided with two groups such as micro- and nanophytoplankton (standing crops) and mesophytoplankton (biomass). However, Skeletonema costatum in anophytoplankton was associated to affect fluctuation between standing crops and biomass.

Potential Risk of Genetically Modified Plants in Korean Ecosystem: a Proposal for Unintended Effects on Korean Wild Species

  • Shim, Sang-In;Lee, Byung-Moo;Kang, Byeung-Hoa
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.46 no.2
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    • pp.157-163
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    • 2001
  • Introgression from genetically modified plants (GMPs) may be dependent on the genetic similarity to wild relative plants. In Korea, many wild plant species are botanically related to the cultivated plants that have a potential to be genetically transformed. The controversy for hazards of GMPs is continuing because the studies on gene flow or introgression are little. Based on the systematic criteria, we have surveyed Korean wild plant species that showed the similarity to cultivating crops. The consideration for feasibility of genetic pollution (introgression of transgene) is necessary for the successful accomplishment in the practical use of GMPs. Although the detrimental effects of GMPs on wild relatives have not been clearly verified, Korean wild plant species related to crop plant (potential GMP) have to be investigated with respect to the introgression. Korean flora consists of ca. 5,500 species. Among them, 1,448 species are classified as weed species (966 native, 325 naturalized, and 167 escaped ones), which is vulnerable to GMPs in term of introgression. We suggested the principal Korean wild plants related to major crops that might be affected by GMPs via introgression. The investigated species herein are selected based on the morphological and phenological relationship. It is necessary to verify the genetic relationship between cultivated plants and wild relatives sing more precise molecular techniques, which provide the information of likelihood for the introgression of transgene.

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A study on the Sorption Hysteresis of principal woods grown in Korea (한국산주요목재(韓國産主要木材)의 히스테레시스에 관(關)한 연구(硏究))

  • Lee, Phil Woo
    • Journal of Korean Society of Forest Science
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    • v.1 no.1
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    • pp.1-6
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    • 1962
  • Hysteresis Loops explaining relationship between E.M.C. and relative humidities of some commercial woods grown in Korea which have not been inspected were studied. Because of Hysteresis Loops are differently constructed among species, the loop of each species is necessary to plot in order to apply for seasoning of wood directly. Therefore relationship between E.M.C. and relative humidities, and Hysteresis Loops were inspected and compaired between species. Small sized ($3{\times}3{\times}1.3cm$) twenty pieces of wood blocks for each species were taken from log which cut few years ago and already attained air dry condition. Five relative humidity conditions (9, 32, 58, 82 and 91%) were controlled to keep constant in the cabinet under temperature $25^{\circ}C$. According to the results, it is concluded that there are considerable differences on the E.M.C. among two types of sorption, eight species and five different relative humidity conditions. Adsorption and desorption curves are showing characteristic Sigmeid Curves and desorption curves always are on the adsorption curves at all compaired species. Average hysteresis ratio is 0.75, the constructed loops of tested species are showing open hysteresis generally and flatten loop constructions of Qnerets aemitissima and Robinia pseudoaeaeia of hard wood species than other soft wood are considered to be established by differences of stability between hard and soft wood.

Comparison of plant species diversity and its relationship with physical environmental factors in Gotjawal Forest, Jeju Island, Republic of Korea, using the modified Whittaker plot method

  • Ju-Seon Lee;Young-Han You;Ji-Won Park;Yeo-Bin Park;Yoon-Seo Kim;Jung-Min Lee;Hae-In Yu;Bo-Yeon Jeon;Kyeong-Mi Cho;Eui-Joo Kim
    • Journal of Ecology and Environment
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    • v.48 no.3
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    • pp.247-255
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    • 2024
  • Background: To effectively understand and evaluate plant diversity in a specific area and make meaningful comparisons between regions, standardized methods that measure diversity irrespective of survey plot size are crucial. This study proposes a model equation for comparing plant species diversity using the modified Whittaker plots. Plant species diversity was measured in two Gotjawal areas on Jeju Island, where the coexistence of northern and southern limit species significantly impacts diversity. By analyzing the relationship between plant species diversity and environmental factors, the study clarified the characteristics of plant and habitat diversity in the Gotjawal ecosystem. Results: The species richness of vascular plants, herbaceous plants, and woody plants increased with area and was higher in Jeoji Gotjawal than in Seonheul Gotjawal. Similarly, the species turnover rate (slope value) was higher in Jeoji Gotjawal (4.37) than in Seonheul Gotjawal (3.85). This indicates that the species richness in Jeoji Gotjawal increases more with the expansion of the survey area (1-1,000 m2), reflecting a faster species turnover rate. Additionally, in Gotjawal areas, species richness increased with greater leaf litter depth, elevation, slope, and rock ratio. These results indicate that differences in plant species diversity were attributed to soil environmental factors. Conclusions: The plant species diversity of Gotjawal, surveyed using standardized methods, was lower than that of forested areas in the central region of South Korea where the same method was applied. Most previous studies on species diversity likely compared diversity without considering a consistent survey area. Therefore, when comparing plant species diversity domestically and globally, it emphasizes the need for the use of standardized survey methods.

Variation of Medicinal Plants Species Richness along Vertical Gradient in Makawanpur District, Nepal

  • Gaire, Damodar;Jiang, Lichun;Yadav, Vijay Kumar;Shah, Jit Narayan;Dhungana, Sunita;Upadhyaya, Anju;Manjan, Shiv Kumar;Heyojoo, Binod Kumar
    • Journal of Forest and Environmental Science
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    • v.37 no.2
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    • pp.104-115
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    • 2021
  • The research attempted to analyze the medicinal plant species richness in the vertical gradient from lower to the highest elevation of Makawanpur, focusing on the relationship between species richness and elevation which is very important for conservation and management of species diversity. Inventory was carried out in the study area by taking sampling intensity of 0.5% in the effective area. Altogether, 42 sample plots were laid in the field with the help of GIS software maintaining 50 m altitude difference. High species diversity was found in the herbs species whereas shrubs have comparatively low species diversity. The maximum species richness is found in herbs and poles whereas shrubs and trees have relatively low species richness. Research showed that species richness of medicinal plants increased with altitudinal gradient. While analyzing the species richness from 350 to 2,550 m (msl), the highest species richness was received with the elevation ranges from 1,800 m to 2,300 m. There was a positive relationship between species richness and altitudinal gradient in the study area. In addition, we have recorded the high value medicinal plants after 1,800 m altitude and rarely within 1,000 m. Medicinal plants correlated both positive and negative relationships with the increased altitude. The altitudinal response has positively seen except density (n/ha) of Shrubs. Domestication and cultivation of high value medicinal plants should be promoted in community forest including private lands. Training, workshops and awareness programs should be conducted to make people aware about medicinal plants resource utilization, conservation and commercialization of available medicinal plants.