• Journal of the Korean Society of Fisheries and Ocean Technology
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• v.59 no.1
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• pp.9-18
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• 2023

Fish samples were collected by a set net from April to December 2020 at the coastal waters off Tongyeong, Korea to determine fish species composition and seasonal variation. A total of 330,675 fish (1,032,578 g) representing 56 species belonging to 39 families were collected during the sampling period. The dominant species were Engraulis japonicus, Trachurus japonicus and Trichiurus japonicus, which accounted for 98.1% of the total number of individuals and 87.5% of the total biomass collected. E. japonicus and Chelidonichthys spinosus appeared every month off the coast of the Tongyeong. Cluster analysis based on the number of individuals of fish were classified into two groups at the dissimilarity level of 57%, and the results of ANOSIM analysis revealed significant differences in community structure among the two groups.

• Journal of Ecology and Environment
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• v.29 no.5
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• pp.415-424
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• 2006

The main objective of this study is to find out the fauna of macroinvertebrate and composition of functional feeding groups about the aquatic insects to microhabitat from the Geum River, Korea. This study is based on investigations of the main channel of Geum River, Korea which is upstream of Daecheong Dam, and carried out in the spring and autumn of 2004. Collections from all the sites were 39,532 individuals, 130 species, 54 families, 16 orders, 7 classes, and 4 phyla of macroinvertebrates. Aquatic insects were composed of 90.76% (118 species) and 98.88% (39,088 individuals) of all the identified species. Among the microhabitats, the riffles were collected 26,293 individuals and 92 species, and the runs were collected 12,329 individuals and 89 species. Finally, the pools were collected 494 individuals and 41 species. In this survey, the proportions of functional feeding groups of aquatic insects were as follows (percent of identified): predators 37.65%, gathering-collectors 23.53%, scrapers 16.47%, filtering-collectors 11.76%, shredders 9.41% and plant-piercers 1.18%. Also, the functional feeding groups were sorted according to microhabitat, in the riffles 30.65% were predators and 29.03% were gathering-collectors; in the run 30.3% were predators, and 28.79% were gathering-collectors; while in the pools 36.67% were predators, and 30.0% were gathering-collectors. In all microhabitats, gathering collectors and predators were predominant, because most of the survey sites are in the midstream. Also, the scrapers were shown more frequently in the riffle (17.74%) and run (18.18 %) than pool (13.13%), the filtering-collectors were shown more frequently in the riffle (14.52%) and the run (12.12%) than the pool (6.67%), and the plant-piercers (3.33%) were found only in pools. But the shredders weren't a difference in the run (10.61%), the pool (10.0%) and the riffle (8.06%), because of the characteristic. Microhabitats (riffle and run) are much alike in composition ratio of functional feeding groups and pool was very lower out of composition ratio in microhabitats. But riffle is very important than run, because most of individual occur in streams. Besides, pool was diverse to composition ratios, considering the number of individuals.

• Journal of Physiology & Pathology in Korean Medicine
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• v.23 no.1
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• pp.214-218
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• 2009

Platycodon grandiflorum is a long-lived herbaceous and one of the very important herbal medicine and foods. P. grandiflorum is called do-ra-ji in Korea. Inter-simple sequence repeats (ISSR) markers were performed in order to analyse the phenetic relationships of four accessions of P. grandiflorum. Wild groups had higher expected diversity, 0.164 for Korean and 0.157 for Chinese accessions than those of cultivated groups, 0.079 for Korea and 0.059 for China. The total genetic diversity in P. grandiflorum was 0.268 across species and the value was lower than average values for species with similar life history traits. The patchy distribution and domestication are proposed as possible factors contributing to low genetic diversity. An assessment of the proportion of diversity within species, HAccession/HSpecies, indicated that about 57.1% the total genetic diversity was among species. Thus, the majority of genetic variation (42.9%) resided within accessions. The estimated Nm (the number of migrants per generation) was very low among four accessions (mean Nm = 0.376). The low estimate of Nm indicated that gene flow was not extensive among four accessions. ISSR01-02 locus can be recognized as an unique locus of Korean groups (wild and cultivated accessions). Thus the locus can be used to distinguish Korean accessions from Chinese accessions. ISSR04-06 locus was found specific to Chinese groups (wild and cultivated accessions) and was not shown in Korean accessions. Although the size of sampling was not large enough for P. grandiflorum, the analyses of ISSRs will certainly provide an enhanced view on the phylogeny of accessions.

• Korean Journal Plant Pathology
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• v.14 no.5
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• pp.519-525
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• 1998

Intraspecific genetic diversity of Korean isolates of Phytophthora drechsleri was investigated based on PCR-RFLP of rDNA along with closely related species in the genus; P. cryptogea, P. melonis, P. erythroseptica, P. cinnamomi, P. cambivora and P. cactorum. Gene regions of nuclear small subunit and internal transcribed spacer (ITS) in rDNA were amplified with polymerase chain reaction and digested with 9 restriction enzymes. Phytophthora species was readily differentiated from each other based on the digestion patterns, however, P. cryptogea was not separable from some isolates of P. drechsleri. Twenty one isolates of P. drechsleri originated from 15 host plants were divided into three distinct groups designated as PdG1, PdG2 and PdG3, respectively. Four isolates in PdG1 were originated from green vegetables and tomato and nine isolates in PdG2 were mainly isolated from medicinal plants. The two groups showed 95.3% homology and four isolates of P. cyptogea came under the groups. However, Eight isolates in PdG3 collected from cucurbits were clearly differentiated from those of PdG1 and PdG2 by 66.5% homology, but completely matched with a Taiwan isolate of P. melonis. Results indicated that three distinct groups exist in Korean isolates of P. drechleri and each group has host preference. In addition, reclassification of the cucurbits isolates are reserved because of their distinct genetic characters from other intraspecific groups in P. drechsleri.

• Korean Journal of Environmental Biology
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• v.38 no.4
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• pp.714-723
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• 2020

This study was conducted to investigate the community stability and similarity of benthic macroinvertebrates in the Giran stream between August and September 2018, and compare results to those reported by Lee (2004). As relates to the total number of species in each taxon in 2018, 45 species were additionally discovered compared to the 2003 study; the number of EPT taxa increased by 14 species and OCH taxa increased by 18 species. The diversity and richness indexes increased while the dominance index tended to decrease. According to analysis of functional feeding groups, 11 more Gathering-collector species were found, making it the highest functional feeding group with 24 species. According to analysis of functional habitat groups, 15 more clinger species were found than in the past, making it the highest functional habitat group with 41 species. A community stability comparison showed that species belonging to 'Stability Group I' had the highest stability rate at 57.1% in 2003 and 61.5% in 2018. According to the biological water quality assessment, in 2018, the average water quality level at each survey site was 'Ia' and 'Very Good' in terms of environmental conditions. As a result of the similarity analysis between the survey points for the species that appeared, two large groups of similarities were classified (similarity group 1: 2003 sites, similarity group 2: 2018 sites).

• Journal of the Korean Society of Fisheries and Ocean Technology
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• v.50 no.4
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• pp.604-613
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• 2014

Community structures and species composition in benthic crustacean around Oryukdo of Busan was investigated using a SCUBA diving in 2011. A total 115 species, 51 families, and 4 taxa were collected during the sampling periods. Species were included 52 species in amphipoda, 49 in decapoda, 8 in isopoda and 6 in thoracica. On cluster analysis, the benthic crustacea community was classified into three groups based on the species composition: group A occurred in spring, group B in autumn and winter and group C in summer. Species composition in benthic crustacean corresponded with the water temperature.

• The Korean Journal of Mycology
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• v.21 no.2
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• pp.140-145
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• 1993

Yeast strains were isolated from healthy women(36 isolates), infertile women(15 isolates) and women suffering from local morbidity(82 isolates). On the basis of 37 different physiological and morphological characteristics, the isolated 133 yeast strains were assigned to 10 species belonging to 5 genera. Four pathogenic species were identified. They were Candida albicans, Candida parapsilosis, Candida tropicalis and Trichosporon beigelii. Candida albicans was the dominant species, whereas Saccharomyces cerevisiae prevailed among the saprophytic species. The percentage occurrence as well as the pattern of yeast species differed in the diagnostic groups. It was higher in the women suffering from local morbidity than in the healthy and infertile women. Moreover, a wider spectrum of species was isolated from this group. Women with intrauterine contraceptive devices showed the highest percentage of yeast occurrence which reached 50% of those tested. Five different antifungal agents were tested fro their effects on the growth of the isolated yeast species in vitro. Nystatin was the most effective against the isolated yeast species, followed by pyrithion zink and ciclopiroxolamine, whereas micronazole and clotrimazole, showed a lesser effect.

• Journal of Species Research
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• v.11 no.1
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• pp.71-77
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• 2022

The subfamily Pimplinae is one of the largest groups of the family Ichneumonidae, currently 1,737 species in 77 genera worldwide. In Korea, 120 species in 33 genera have been recorded. The South Korean species of the subfamily Pimplinae Wesmael, 1845 (Hymenoptera: Ichneumonidae) are the focus of this study. Here, six species are newly added in the South Korean fauna: Aravenator kamijoi Momoi, Chablisea varicolor Liu, He & Chen, Clistopyga arctica Kusigemati, Liotryphon cydiae (Perkins), L. strobilellae (Linnaeus), and Zaglyptus semirufus marginatus Kasparyan. Of these new taxa, two genera (Aravenato and, Chablisea) belonging to the tribe Ephialtini are also newly recorded from South Korea. We present a key to species of South Korean Clistopyga, Liotryphon, and Zaglyptus, diagnosis, photographs, and distribution. As a result of this study, the Korean fauna of Pimplinae is now known to consist of 126 species in 35 genera. All Pimplinae specimens are kept in the collections of the Geolim Entomological Institute (GEI), Daegu, South Korea.

• Journal of Species Research
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• v.12 no.1
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• pp.95-108
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• 2023

Ciliates are unicellular eukaryotes and one of the most abundant and speciose protistan groups. However, their diversity is underestimated, and many new species are waiting for our discovery. During several field surveys conducted from 2018 to 2021 to document indigenous Korean ciliates, 10 unrecorded ciliate species were collected and investigated from freshwater, marine, and semiterrestrial habitats. The morphology of these species was studied based on observation of living and protargol-stained specimens. These species belong to five classes as follows: 1) class Heterotrichea - Peritromus faurei; 2) class Spirotrichea - Heterotachysoma dragescoi, Pseudokeronopsis parasongi, and Certesia quadrinucleata; 3) class Nassophorea - Chilodontopsis depressa; 4) class Prostomatea - Plagiocampa rouxi and Urotricha furcata; and 5) class Oligohymenophorea - Metanophrys similis, Uronema gallicum, and Protocyclidium citrullus. Also, we provide a brief diagnosis, photomicrographs, and information of the locality for each species. Further, we compare each species with the most recent description and with similar congeners.

• Journal of Microbiology and Biotechnology
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• v.26 no.10
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• pp.1723-1735
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• 2016

Pyrosequencing analysis of intestinal microflora from healthy Thai vegetarians and non-vegetarians exhibited 893 OTUs covering 189 species. The strong species indicators of vegetarians and non-vegetarians were Prevotella copri and Bacteroides vulgatus as well as bacteria close to Escherichia hermanii with % relative abundance of 16.9 and 4.5-4.7, respectively. Core gut microbiota of the vegetarian and non-vegetarian groups consisted of 11 and 20 different bacterial species, respectively, belonging to Actinobacteria, Firmicutes, and Proteobacteria commonly found in both groups. Two species, Faecalibacterium prausnitzii and Gemmiger formicilis, had a prevalence of 100% in both groups. Three species, Clostridium nexile, Eubacterium eligens, and P. copri, showed up in most vegetarians, whereas more diversity of Collinsella aerofaciens, Ruminococcus torques, various species of Bacteroides, Parabacteroides, Escherichia, and different species of Clostridium and Eubacterium were found in most non-vegetarians. Considering the correlation of personal characters, consumption behavior, and microbial groups, the age of non-vegetarians showed a strong positive correlation coefficient of 0.54 (p = 0.001) to Bacteroides uniformis but exhibited a moderate one to Alistipes finegoldii and B. vulgatus. Only a positive moderate correlation of body mass index and Parabacteroides distasonis appeared. Based on the significant abundance of potential pathogens, the microbiota of the non-vegetarian group showed an abundance of potential pathogen varieties of Bilophila wadsworthia, Escherichia coli, and E. hermannii, whereas that of the vegetarian group served for only Klebsiella pneumoniae. These results implied that the microbiota of vegetarians with high abundance of P. copri and low potential pathogen variety would be a way to maintain good health in Thais.