• Title/Summary/Keyword: soil strain

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Characterization of Organochlorine Insecticide Endosulfan-Degrading Bacterium Isolated from Seaside Sediment (갯벌에서 분리한 유기염소계 살충제 Endosulfan 분해 세균의 특성)

  • Park, Mi-Eun;Kim, Young-Mog;Chung, Yong-Hyun
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.44 no.3
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    • pp.207-215
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    • 2011
  • An endosulfan degrading bacterial strain, K-1321, was isolated by endosulfan-enrichment culture from a seaside sediment collected at Dadaepo Beach, Busan, Korea. The strain was identified as a Serratia sp. based on the results of morphological, biochemical and 16S rDNA homology analyses. Serratia sp. K-1321 was able to completely degrade 50 ppm endosulfan in culture media and soil within 6 weeks at $25^{\circ}C$. GC/MS analysis revealed that endosulfan diol was an intermediate of the bacterial endosulfan degradation. Considering the above results, we concluded that Serratia sp. K-1321 utilized endosulfan as a carbon source and metabolized endosulfan via a less toxic pathway, such as the formation of endosulfan diol as an intermediate.

Isolation of Sphinin, an Inhibitor of Sphingomyelinase, from Streptomyces sp. F50970

  • LIM, SI-KYU;WAN PARK
    • Journal of Microbiology and Biotechnology
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    • v.9 no.5
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    • pp.655-660
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    • 1999
  • Sphingomyelinase (SMase EC:3.l.4.l2) has been suggested to play important roles in the cell cycle, differentiation, apoptosis, inflammation, and the regulation of eukaryotic stress responses. SMase inhibitors may be a powerful tool to elucidate and regulate these cellular responses in which SMase involves. We first isolated an SMase inhibitor, named sphinin, from a strain of soil actinomycetes, F50970. Sphinin inhibited Mg/sup 2+/ -dependent neutral SMase from chicken embryo at 1.2 ㎍/㎖ of IC/sub 50/ Sphinin also inhibited acidic SMase, but it had no inhibitory activity on PI-PLC and PC-PLC, suggesting that sphinin is a specific inhibitor of SMase. The strain F50970 was identified as a Streptomyces sp. by its spiral spore chain, LL-diaminopimelic acid, menaquinone patterns of MK-9 (H'6) and MK-9 (H'8), FA-2c type of fatty acid pattern, and other morphological, physiological, and cultural characteristics.

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Identification and Characterization of Bdellovibrio bacteriovorus, a Predator of Burkholderia glumae

  • Song, Wan-Yeob
    • Journal of Microbiology and Biotechnology
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    • v.14 no.1
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    • pp.48-55
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    • 2004
  • Six strains of an obligate predatory bdellovibrio isolate that preys on Burkholderia glumae in rice paddy field water and rhizosphere soil, were identified and characterized. The numbers of Bdellovibrio cells varied from $3.2{\times}10^3$ to $9.2{\times}10^3$ plaque-forming unit/g after enrichment in cells of B. glumae. Prey range tests with six Bdellovibrio strains and 17 prey strains of rice-pathogenic, antibiosis-related, or nitrogen-fixing bacteria resulted in unique predation patterns in related prey cells. Strain BG282 had the widest prey range on 7 plant pathogenic bacteria among the 17 prey strains tested. However, no predation occurred with strains of Azospirillum brasilense, Paenibacillus polymyxa, Pseudomonas fluorescens, P. putida, and Serratia marcescens that are associated with antibiosis or nitrogen fixation in the rice ecosystem. Identification was confirmed by the presence of typical bdelloplast in the prey cells of B. glumae and by a PCR assay using B. bacteriovorus-specific primers. Furthermore, 16S rDNA sequencing of the six bdellovibrio strains showed a homology range of 97.2% to 99.2% to the type strain of B. bacteriovorus.

The Production and Properties of Exopolysaccharides(P0L-11) by Bacillus sp. LK-1 (Bacillus sp. LK-1의 Exopolysaccharides(POL-II) 생산 및 특성)

  • 김양효;안성구;서현호;김혜자;윤병대
    • Microbiology and Biotechnology Letters
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    • v.21 no.5
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    • pp.478-485
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    • 1993
  • The strain which produced highly viscous exopolysaccharides (EPS) in liquid culture was selected from soil. The strain was supposed to Bacillus sp. from the results of mophological, biochemical and physiological tests. The medium composition for EPS production was trypton 0.75%, sucrose 4%, CaCO3 0.01%, Winogradsky's nitrogen free mineral medium 5ml/l and pH 7.0. In 2-l jar fernenter, the viscosity of culture broth after 120-hr cultivation time was very high (60, 000 cps) and the amount of EPS was 6.2g/l.

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Acinetobacter sp. BE-254에 의한 유화제의 생산

  • Kim, Soon-Han;Lim, Ee-Jong;Choi, Kyung-Sook;Jeong, Yong-Kee;Jang, Kyung-Lib;Lee, Tae-Ho
    • Microbiology and Biotechnology Letters
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    • v.24 no.2
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    • pp.206-212
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    • 1996
  • The strain producing bioemulsifier was isolated from soil samples. The isolated strain was identified as the genus Acinetobacter through its morphological, cultural and physiological characteristics. The highest emulsification activity and stability by Acinetobacter sp. BE-254 was observed after 5 days of cultivation in the culture medium containing n-hexadecane 4%, NaNO$_{3}$ 0.2%, KH$_{2}$PO$_{4}$ 0.01%, MgSO$_{4}$-7H$_{2}$O 0.01%, CaCl$_{2}$ 0.01%, and yeast extract 0.01%. The optimum pH and temperature for bioemulsifier production were pH 7.0 and 30$\circ$C, respectively. Furthermore the most of bioemulsifier was produced during the exponential growth phase, and this suggested that the bioemulsifier production was growth-associated. The bioemulsifier showed good emulsification activity on various emulsifying substrates such as hydrocarbons, edible oils, and petroleum fractions.

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Parameters Characteristics of Single Work Hardening Model Dependent on the Stress Path (응력경로에 따른 단일항복면구성모델의 토질매개변수 특성)

  • 김찬기
    • Magazine of the Korean Society of Agricultural Engineers
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    • v.38 no.2
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    • pp.133-144
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    • 1996
  • To get accurate results, the realistic stress-strain relationships of soils are dependent on a number of factors such as soil types, density, stress levels and stress path. Such attempts are continuously being made by the developement of analytical models for soils incorporating all such factors. Isotropic compression-expansion test and a series of drained conventional triaxial tests with several stress path for Baekma river sand were performed to investigate parameters characteristics of Lade's single work hardening model dependant on the stress path. Using the computer program based on the regression analysis, the values of parameters for the model were determined. In conclusion, the parameters of Lade's model are little influenced by the stress paths. Though yield criterion parameters ( h, ${\alpha}$a) are much influenced by stress level and stress path, the parameters don't have influence on stress-strain behavior.

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Biological Control Effect of Treating Avirulent Bacteriocin-Producing Strain of Pseudomonas sozanacearum Adapted to Low Temperature on Tobacco Bacterial Wilt (비병원성 Bacteriocin 생성 Pseudomonu solonueomm의 저온성 균주를 이용한 담배 세균성마름병 방제효과)

  • 이영근;손준수
    • Journal of the Korean Society of Tobacco Science
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    • v.15 no.1
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    • pp.26-33
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    • 1993
  • Effect of an avirulent bacteriocin-producing strain(ABPS) of Pseudomonas solanacearum adapted to low temperature on the control of tobacco bacterial wilt was examined under the natural field conditions. The ABPS of p. solanacearum were succeeding-cultured at gradually low temperature, 3$0^{\circ}C$ to 13$^{\circ}C$. The isolates adapted to low temperature grew faster than the wild type either in artificial media or on the tobacco rhizoplane. The control effect of one of the isolates on bacterial wilt was higher than that of the wild type when the bacterial suspension had been poured onto the tobacco rhizosphere soil on 1 day before and 15 days after transplanting to the field. It was suggested that ABPS of p. solanaceamm adapted to the low temperature, might be more effective biological control agent than the wild type.

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Isolation and Identification of a Pentachloronitrobenzene(PCNB) Degrading Bacterium Alcaligenes xylosoxidans PCNB-2 from Agricultural Soil

  • Shin, Sung-Kyu;Kim, Jang-Eok;Kwon, Gi-Seok;Kwon, Jin-Wook;Oh, Eun-Taex;So, Jae-Seong;Koh, Sung-Cheol
    • Journal of Microbiology
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    • v.41 no.2
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    • pp.165-168
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    • 2003
  • We report a new PCNB-degrading strain (PCNB-2) that is able to utilize and grow on PCNB (100 ppm) as a sole carbon source. This strain was identified as Alcaligenes xylosoxidans based upon 16S rDNA sequence analysis, API 20 NE tests and cell membrane lipid analysis. The new PCNB degrader Alcaligenes xylosoxidans PCNB-2 could find use in bioremediation of PCNB, which is environmentally persistent.

Production and Characterization of Extracellular $\beta$-Lactamase from Streptomyces aureofaciens SMF14

  • Kim, Myung-Kuk
    • Journal of Microbiology and Biotechnology
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    • v.3 no.3
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    • pp.174-180
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    • 1993
  • A strain SMF14 producing an extracellular $\beta$-lactamase was isolated from soil and identified to be a strain of Streptomyces aureofaciens. $\beta$-Lactamase was purified from the cell free culture broth through batchwise hydroxyapatite adsorption, anion exchange chromatography on DEAE Sephadex A-50, gel filtration on Sephadex G-75, and adsorption chromatography on hydroxyapatite. The molecular mass was estimated to be about 43 kDa by SDS-PAGE. The $\beta$-lactamase had substrate specificity to penicillins and it was inhibited by clavulanic acid, being classified to the group 2a of penicillinase.. The optimal reaction pH and temperature were pH 6.0~7.5 and $50^{\circ}C$. The $K_m, and V_{max}$ values of $\beta$-lactamase for penicillin G were calculated to be 1.72 mM and 5.4$\times$$10^5 \mu M \cdot min^{-1}$, respectively.

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Development of Dynamometer for Soil Bin Experiment (인공토조용(人工土槽用) 6분역계(分力計) 개발(開發)에 관한 연구(硏究))

  • Park, J.G.;Chung, C.J.;Lee, K.S.;Choi, C.H.;Park, W.Y.
    • Journal of Biosystems Engineering
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    • v.16 no.1
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    • pp.9-17
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    • 1991
  • A dynamometer was designed and constructed to measure three directional forces and moments of pull type implement with eliminating the interference between the forces. The dynamometer consists of a linear motion bearing, self-aligning bearings, universal joints, and cantilevers where strain gages were attached. A data acuquisition system was developed to collect data and to analyze them. The data acuquisition system consists of the dynamometer, a potentiometer to measure the implement depth, strain amplifiers, a A/D converter, and an IBM-AT compatible microcomputer. Program, written in C language, was developed to read data from tranducers with given interval, to calculate forces and moments, to display them on screen, and to store them on disk. The calibration results showed that cantilevers had good linearity and there was no interference among directional forces. When applied loads were reduced with constant rate, hysteresis was appeared on the dynamometer. It might to be reduced by using ball bearings instead of self-aligning bearings.

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