• Title/Summary/Keyword: site specific

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Effect of Amino Acid Substitutions of Escherichia Coli $\gamma$-Glutamylcysteine Synthetase (Escherichia coli $\gamma$-Glutamylcysteine Synthetase의 아미노산 치환 효과)

  • 남용석;김중수;곽준혁;박영인;이세영
    • Korean Journal of Microbiology
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    • v.29 no.5
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    • pp.278-283
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    • 1991
  • Two amino acid residues ($Ala^{494}$ and $Ser^{495}$ of E. coli .gamma.-glutamylcysteine synthetase have been investigated whether they are the site of feedback inhibition by site specific mutagenesis. Single substitution of $serine^{495}$ (S495F), and double substitutions of alanine$^{494}$ and $serine^{495}$ (A494G-S495F) resulted in the inactivation of the .gamma.-glutamylcysteine synthetase activity. Substitution of $alanine^{494}$ with $glycine^{494}$ resulted in a higher level of feedback inhibition. These results suggest that $serine^{495}$ in .gamma.-glutamylcysteine synthetase is required for its catalytic acitvity and $alanine^{494}$ is presumably related to the feeback inhibition site.

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Evaluation of Site-specific Seismic Response Characteristics at Town Fortress Areas Damaged by Historical Earthquakes (역사 지진 피해 발생 읍성 지역에 대한 부지 고유의 지진 응답 특성 평가)

  • Sun, Chang-Guk;Chung, Choong-Ki;Kim, Dong-Soo;Kim, Jae-Kwan
    • The Journal of Engineering Geology
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    • v.17 no.1 s.50
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    • pp.1-13
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    • 2007
  • In order to evaluate the local site effects at two town fortress areas in Korea where stone parapets were col-lapsed by historical earthquakes, site characteristics were assessed using site investigations such as borehole drillings and seismic tests. Equivalent-linear site response analyses were conducted based on the shear ways velocity ($V_s$) profiles and geotechnical characteristics determined from site investigations. The study sites are categorized as site classes C and B according to the mean $V_s$ to 30 m ranging from 500 to 850 m/s, and their site periods are distributed in the short period range of 0.06 to 0.16 sec, which contains the natural period of fortress wall and stone parapet. From the results of site response analyses in the study areas, for site class C indicating most of site conditions, contrary to site class B, the short-period (0.1-0.5 sec) and mid-period (0.4-2.0 sec) site coefficients, $F_a$ and $F_v$ specified in the Korean seismic design guide, underestimate the ground motion in short-period band and overestimate the ground motion in mid-period band, respectively, due to the high amplification in short period range, which represent the site-specific seismic response characteristics. These site-specific response characteristics indicate the potential of resonance in fortress walls during earthquake and furthermore could strongly affect the collapse of parapets resulted from seismic events in historical records.

Identification of an Enhancer Critical for the ephirn-A5 Gene Expression in the Posterior Region of the Mesencephalon

  • Park, Eunjeong;Noh, Hyuna;Park, Soochul
    • Molecules and Cells
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    • v.40 no.6
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    • pp.426-433
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    • 2017
  • Ephrin-A5 has been implicated in the regulation of brain morphogenesis and axon pathfinding. In this study, we used bacterial homologous recombination to express a LacZ reporter in various ephrin-A5 BAC clones to identify elements that regulate ephrin-A5 gene expression during mesencephalon development. We found that there is mesencephalon-specific enhancer activity localized to a specific +25.0 kb to +30.5 kb genomic region in the first intron of ephrin-A5. Further comparative genomic analysis indicated that two evolutionary conserved regions, ECR1 and ECR2, were present within this 5.5 kb region. Deletion of ECR1 from the enhancer resulted in disrupted mesencephalon-specific enhancer activity in transgenic embryos. We also found a consensus binding site for basic helix-loop-helix (bHLH) transcription factors (TFs) in a highly conserved region at the 3'-end of ECR1. We further demonstrated that specific deletion of the bHLH TF binding site abrogated the mesencephalon-specific enhancer activity in transgenic embryos. Finally, both electrophoretic mobility shift assay and luciferase-based transactivation assay revealed that the transcription factor Ascl1 bound the bHLH consensus binding site in the mesencephalon-specific ephrin-A5 enhancer in vitro. Together, these results suggest that the bHLH TF binding site in ECR1 is involved in the positive regulation of ephrin-A5 gene expression during the development of the mesencephalon.

Calculation of preliminary site-specific DCGLs for nuclear power plant decommissioning using hybrid scenarios

  • Seo, Hyung-Woo;Sohn, Wook
    • Nuclear Engineering and Technology
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    • v.51 no.4
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    • pp.1098-1108
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    • 2019
  • Korea's first commercial nuclear power plant at Kori site was permanently shut down in 2017 and is currently in transition stage. Preparatory activities for decommissioning such as historical site assessment, characterization, and dismantling design are being actively carried out for successful D&D (Dismantling and Decontamination) at Kori site. The ultimate goal of decommissioning will be to ensure the safety of workers and residents that may arise during the decommissioning of nuclear facilities and, thereby finally returning the site to its original status in accordance with the release criteria. Upon completion of decommissioning, the resident's safety at a site released will be assessed from the evaluation of dose caused by radionuclides expected to be present or detected at the site. Although the U.S. commercial nuclear power plants with decommissioning experience use different site release criteria, most of them are 0.25 mSv/y. In Korea, both the unrestricted and restricted release criteria have been set to 0.1 mSv/y by the Nuclear Safety and Security Commission. However, since the dose is difficult to measure, measurable concentration guideline levels for residual radionuclides that result in dose equivalent to the site release criteria should be derived. For this derivation, site reuse scenario, selection of potential radionuclides, and systematic methodology should be developed in planning stage of Kori site decommissioning. In this paper, for calculation of a preliminary site-specific Derived Concentration Guideline Levels (DCGLs) for the Nuclear Power Plant site, a novel approach has been developed which can fully reflect practical reuse plans of the Kori site by taking into account multiple site reuse scenarios sequentially, thereby striking a remarkable distinction with conventional approaches which considers only a single site scenario.

Mapping Species-Specific Optimal Plantation Sites Based on Environmental Variables in Namwon City, Korea (환경요인을 이용한 남원시의 적지적수도 제작)

  • Moon, Ga Hyun;Kim, Yong Suk;Lim, Joo Hoon;Shin, Man Yong
    • Korean Journal of Agricultural and Forest Meteorology
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    • v.17 no.2
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    • pp.126-135
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    • 2015
  • This study was conducted to develop a large scale map of species-specific plantation sites based on selected environmental variables such as topography, soil, and climatic factors in Namwon city. Site index equations by tree species were first regressed to 27 environmental variables that could influence the productivity of forest sites using digital forest site maps, digital climate maps, and the 5th National Forest Inventory data. Site index equations by tree species were all evaluated to estimate site productivity using 4-5 environmental variables, and the models' reliability was confirmed based on evaluation statistics. The determination coefficients of site index equations by species ranged from 0.42 to 0.76. With the site index equations, the site conditions appropriate for productive sites by species were considered to assess spatial distribution of productive areas for each species. The final map for optimal plantation in Namwon city was produced based on both site index equations and site conditions appropriate for productive sites by each species using GIS technique. Field survey was conducted to evaluate the suitability of selected species on the map of species-specific plantation sites. Results showed that the plantation map provides relatively reasonable spatial distribution of productive areas for selected species. It was revealed, however, that the sites evaluated as 'not suitable' for any tree species should be revised and complemented with additional information, especially with the site conditions appropriate for productive sites by species of interest. The outcomes of this study are expected to provide information for making customized species-specific plantation maps.

Regional Assessment of Seismic Site Effects and Induced Vulnerable Area in Gyeonggi-do, South Korea, Using GIS (GIS 기반 경기도 광역영역의 부지지진응답 특성 및 연계 지진 취약지역 분석)

  • Kim, Han-Saem;Sun, Chang-Guk;Cho, Hyung-Ik;Nam, Jee-Hyun
    • Journal of the Korean Geotechnical Society
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    • v.34 no.5
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    • pp.19-35
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    • 2018
  • The necessity of predicting the spatial information of the site-specific seismic response, which is essential information for the comprehensive earthquake disaster countermeasures, is increasing for the mid-west urban areas where the earthquake-induced damages can be increased due to frequent occurrence of mid-scale earthquake such as 2016 Gyeongju Earthquake and 2017 Pohang Earthquake. Especially, researches on strategic securing of site survey datasets and understanding the site-specific site response characteristics were conducted for Gyeonggi-do, South Korea. In this study, a GIS-based framework for site-specific assessment of site response and induced vulnerable area in Gyeonggi-do, South Korea was proposed. Geo-Data based on GIS platform was constructed for regional estimation of geotechnical characteristics by collecting borehole and land coverage datasets. And the geo-spatial grid information was developed for deriving spatial distribution of geotechnical layer and site response parameters based on the optimization of the geostatistical interpolation method. Accordingly, base information for Improving earthquake preparedness measures was derived as seismic zonation map with administrative sub-units considering the quantitative site effect of Gyeonggi-do.

Characterization of a new staphylococcal site-specific recombinase sin and genetic organization of its flanking region

  • Yong, Jun-Hyong;Kim, Young-Sun;Byeon, Woo-Hyeon
    • Journal of Microbiology
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    • v.35 no.2
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    • pp.92-96
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    • 1997
  • A new site-specific recombinase sin, as a component of a putatie transposon has been cloned and its base sequence has been determined. The proposed sin shows a hish degree of homology with pI9789-sin and pSK1-sin. There is a large (16 bp) inverted repeat downstream of proposed sin and the postulate dhelix-turn-helix motif is located at the extreme C-terminus of the poposed Sin. The transposase gene (tnpA) and .betha.-lactamase gene (blaZ) are located upstream of sin and arsenate reductase gene (arsC) and arsenic efflux pump protein gene (ars B) are downstream. This genetic arrangement seems to be a part of a new putative transposon because there is no known transposon with a gene arrangement of tnpA-blaZ-sin-arsC.

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SITE-SPECIFIC ATMOSPHERIC DISPERSION CHARACTERISTICS OF KOREAN NUCLEAR POWER PLANT SITES

  • Han, M.H.;Kim, E.H.;Suh, K.S.;Hwang, W.T.;Choi, Y.G.
    • Journal of Radiation Protection and Research
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    • v.26 no.3
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    • pp.305-309
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    • 2001
  • Site-specific atmospheric dispersion characteristics have been analyzed. The northwest and the southwest wind prevail on nuclear sites of Korea. The annual isobaric surface averaged for twenty years around Korean peninsula shows that west wind prevails. The prevailing west wind is profitable in the viewpoint of radiation protection because three of four nuclear sites are located in the east side. Large scale field tracer experiments over nuclear sites have been conducted for the purpose of analyzing the atmospheric dispersion characteristics and validating a real-time atmospheric dispersion and dose assessment system FADAS. To analyze the site-specific atmospheric dispersion characteristics is essential for making effective countermeasures against a nuclear emergency.

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KNOTTED AND LINKED PRODUCTS OF RECOMBINATION ON T (2, n)#T (2, m) SUBSTRATES

  • Flapan, Erica;Grevet, Jeremy;Li, Qi;Sun, Chen Daisy;Wong, Helen
    • Journal of the Korean Mathematical Society
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    • v.51 no.4
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    • pp.817-836
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    • 2014
  • We develop a topological model of site-specific recombination that applies to substrates which are the connected sum of two torus links of the form T(2, n)#T(2, m). Then we use our model to prove that all knots and links that can be produced by site-specific recombination on such substrates are contained in one of two families, which we illustrate.