• Title/Summary/Keyword: series model

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Reverse Engineering of a Gene Regulatory Network from Time-Series Data Using Mutual Information

  • Barman, Shohag;Kwon, Yung-Keun
    • Annual Conference of KIPS
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    • 2014.11a
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    • pp.849-852
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    • 2014
  • Reverse engineering of gene regulatory network is a challenging task in computational biology. To detect a regulatory relationship among genes from time series data is called reverse engineering. Reverse engineering helps to discover the architecture of the underlying gene regulatory network. Besides, it insights into the disease process, biological process and drug discovery. There are many statistical approaches available for reverse engineering of gene regulatory network. In our paper, we propose pairwise mutual information for the reverse engineering of a gene regulatory network from time series data. Firstly, we create random boolean networks by the well-known $Erd{\ddot{o}}s-R{\acute{e}}nyi$ model. Secondly, we generate artificial time series data from that network. Then, we calculate pairwise mutual information for predicting the network. We implement of our system on java platform. To visualize the random boolean network graphically we use cytoscape plugins 2.8.0.

A Speed Control of A Series DC Motor Using Adaptive Fuzzy Sliding-Mode Method (적응 퍼지 슬라이딩 모드 기법을 이용한 Series DC 모터의 속도제어)

  • Kim, Do-Woo;Yang, Hai-Won;Jung, Gi-Chul;Lee, Hyo-Sup
    • Proceedings of the KIEE Conference
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    • 2001.07d
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    • pp.2292-2295
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    • 2001
  • In this paper, The control problem for a series DC motor is considered to adaptive fuzzy sliding-mode control scheme. Based on a nonlinear mathematical model of a series connected DC motor, instead of the combination of a nonlinear transformation and state feedback(feedback linearization) reduces the nonlinear control design. To demonstrate its effectiveness, an experimental study of this controller is presented. Two sets of fuzzy rule bases are utilized to represent the equivalent control input with unknown system functions of the main target. The membership functions of the THEN-part, which is used to construct a suitable equivalent control of SMC, are changed according to the adaptive law. With such a design scheme, we not only maintain the distribution of membership functions over state space but also reduce computing time considerably.

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Threshold-asymmetric volatility models for integer-valued time series

  • Kim, Deok Ryun;Yoon, Jae Eun;Hwang, Sun Young
    • Communications for Statistical Applications and Methods
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    • v.26 no.3
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    • pp.295-304
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    • 2019
  • This article deals with threshold-asymmetric volatility models for over-dispersed and zero-inflated time series of count data. We introduce various threshold integer-valued autoregressive conditional heteroscedasticity (ARCH) models as incorporating over-dispersion and zero-inflation via conditional Poisson and negative binomial distributions. EM-algorithm is used to estimate parameters. The cholera data from Kolkata in India from 2006 to 2011 is analyzed as a real application. In order to construct the threshold-variable, both local constant mean which is time-varying and grand mean are adopted. It is noted via a data application that threshold model as an asymmetric version is useful in modelling count time series volatility.

The Trip Generation Models with Time-effects (시간효과를 반영한 통행발생모형 개발)

  • Kim, Sang-Rok;Kim, Jin-Hee;Kim, Hyung-Jin;Chung, Jin-Hyuk
    • Journal of Korean Society of Transportation
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    • v.30 no.1
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    • pp.103-112
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    • 2012
  • This research introduces a trip generation model reflecting time-series effects derived from a panel analysis with the data collected from the national household trip surveys conducted in 1996, 2002 and 2006. The existing methods are unable to reflect time-series effects from the change of socioeconomic conditions because the parameters applied to the model were basically from the base year of study - the parameter values were unchanged. This study proposes a new trip generation model developed through a panel analysis performed with the data collected from the last three national household trip surveys. From the results, it was found that the number of school trips increases and that the number of shopping trips decreases as time passes. The results showed that there are time-series effects affecting in trip generation.

Time series models based on relationship between won/dollar and won/yen exchange rate (원/달러환율과 원/엔 환율 관계에 관한 시계열 모형연구)

  • Lee, Hoonja
    • Journal of the Korean Data and Information Science Society
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    • v.27 no.6
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    • pp.1547-1555
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    • 2016
  • The variability of exchange rate influences on the various aspect, especially economics, social phenomenon, industry, and culture of the country. In this article, time series model that won/yen exchange rate can be explained by won/dollar exchange rate has been studied. Daily exchange rate data have been used from January 1, 1999 to December 31, 2015. The daily data divided into two period based on the world financial crisis, September 13, 2008. The first period was January 1, 1999 through September 12, 2008 and the second period was October 1, 2008 through December 31, 2015. The AR+IGARCH (1, 1) model has been used for analyzing the variability of exchange rate. In both first period and second period, the estimation of won/yen exchange rate are somewhat underestimated compared with the actual value.

Application to Evaluation of Hydrologic Time Series Forecasting for Long-Term Runoff Simulation (장기유출모의를 위한 수문시계열 예측모형의 적용성 평가)

  • Yoon, Sun-Kwon;Ahn, Jae-Hyun;Kim, Jong-Suk;Moon, Young-Il
    • Journal of Korea Water Resources Association
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    • v.42 no.10
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    • pp.809-824
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    • 2009
  • Hydrological system forecasting, which is the short term runoff historical data during the limited period in dam site, is a conditional precedent of hydrological persistence by stochastic analysis. We have forecasted the monthly hydrological system from Andong dam basin data that is the rainfall, evaporation, and runoff, using the seasonal ARIMA (autoregressive integrated moving average) model. Also we have conducted long term runoff simulations through the forecasted results of TANK model and ARIMA+TANK model. The results of analysis have been concurred to the observation data, and it has been considered for application to possibility on the stochastic model for dam inflow forecasting. Thus, the method presented in this study suggests a help to water resource mid- and long-term strategy establishment to application for runoff simulations through the forecasting variables of hydrological time series on the relatively short holding runoff data in an object basins.

The Metaphorical Model of Archimedes' Idea on the Sum of Geometrical Series (무한 등비급수의 합에 대한 Archimedes의 아이디어의 은유적 모델과 그 교육적 활용)

  • Lee, Seoung Woo
    • School Mathematics
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    • v.18 no.1
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    • pp.215-229
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    • 2016
  • This study aims to identify Archimedes' idea used while proving proposition 23 in 'Quadrature of the Parabola' and to provide an alternative way for finding the sum of geometric series without applying the concept of limit by extending the idea though metaphor. This metaphorical model is characterized as static and thus can be complimentary to the dynamic aspect of limit concept adopted in Korean high school mathematics textbooks. In addition, middle school students can understand $0.999{\cdots}=1$ with this model in a structural way differently from the operative one suggested in Korean middle school mathematics textbooks. In this respect, I argue that the metaphorical model can be an useful educational tool for Korean secondary students to overcome epistemological obstacles inherent in the concepts of infinity and limit by making it possible to transfer from geometrical context to algebraic context.

Concentration of Citrus Essence Aroma Model Solution by Pervaporation (투과증발법을 이용한 감귤 Essence Aroma 모델액의 농축)

  • Lee Yong-Taek;Park Joong-Won;Shin Dong-Ho
    • Membrane Journal
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    • v.16 no.1
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    • pp.68-76
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    • 2006
  • This is the research about the concentration of trace citrus flavor components in water by pervaporation. We have investigated the permeation characteristics depending on the material and formation of membranes using four siloxane-based polymer composite membranes. We have also chosen the optimal membrane and investigated the permeation characteristics depending on the feed temperature, concentration and flow rate. And then it has been analyzed by using resistance-in series model. In the permeation experiment of citrus essence aroma model solution through the four siloxane-based polymer composite membranes, PVDF/POMS membranes have showed the best flavor flux and enrichment factor. As a result of the permeation experiment depending on the feed temperature, concentration and flow rate, we can find that as the feed temperature and concentration increase, the flavor flux increases while the enrichment factor decreases. And the flavor flux and enrichment factor increased as the flow rate increases.

Study of an improved and novel venturi scrubber configuration for removal of radioactive gases from NPP containment air during severe accident

  • Farooq, Mujahid;Ahmed, Ammar;Qureshi, Kamran;Shah, Ajmal;Waheed, Khalid;Siddique, Waseem;Irfan, Naseem;Ahmad, Masroor;Farooq, Amjad
    • Nuclear Engineering and Technology
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    • v.54 no.9
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    • pp.3310-3316
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    • 2022
  • Owing to the rising concerns about the safety of nuclear power plants (NPP), it is essential to study the venturi scrubber in detail, which is a key component of the filtered containment venting system (FCVS). FCVS alleviates the pressurein containment byfiltering and venting out the contaminated air. Themain objective of this research was to perform a CFD investigation of different configurations of a circular, non-submerged, self-priming venturi scrubber to estimate and improve the performance in the removal of elemental iodine from the air. For benchmarking, a mass transfer model which is based on two-film theory was selected and validated by experimental data where an alkaline solution was considered as the scrubbing solution. This mass transfer model was modified and implemented on a unique formation of two self-priming venturi scrubbers in series. Euler-Euler method was used for two-phase modeling and the realizable K-ε model was used for capturing the turbulence. The obtained results showed a remarkable improvement in the removal of radioactive iodine from the air using a series combination of venturi scrubbers. The removal efficiency was improved at every single data point.

Prediction of Residual Settlement of Ground Improved by Vertical Drains Using the Elasto-Viscous Consolidation Model - Application for Field Condition - (탄-점성 압밀이론에 의한 버티칼 드레인 타설지반의 잔류침하 예측 (II) - 현장조건에의 적용 -)

  • Baek, Won-Jin;Lee, Kang-Il;Kim, Woo-Jin
    • Journal of the Korean Geotechnical Society
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    • v.23 no.6
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    • pp.85-95
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    • 2007
  • In this study, in order to propose the prediction method of the residual settlement of clayey ground improved by vertical drains, a series of numerical analyses for a model ground were carried out using the elasto-viscous consolidation model. And the effects of ground improvement conditions of the ratio of effective radii $(r_e/r_w)$, consolidation pressure $({\Delta}p)$ on normally consolidated state, and the OCR (overconsolidation ratio) on overconsolidated state to reduce the residual settlement in three-dimensional consolidation by vertical drains were investigated by performing a series of numerical analyses. Furthermore, based on the results of a series of numerical analyses for the model ground, the predicting method of the residual settlement of clayey ground with vertical drains and the determination method of the value of OCR required to control the residual settlement within an acceptable value are proposed.