• Title/Summary/Keyword: rice blast.

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Selection of Representative Magnaporthe oryzae Isolates and Rice Resistant Gene Types for Screening of Blast-resistant Rice Cultivars (우리나라 벼 도열병균의 대표 균주 및 벼의 저항성 유전자형 선발)

  • Goh, Jaeduk;Kim, Byung-Ryun;Lee, Se-Won;Roh, Jae-Hwan;Shin, Dong-Bum;Jeung, Ji-Ung;Cho, Young-Chan;Han, Seong-Sook
    • Research in Plant Disease
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    • v.19 no.4
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    • pp.243-253
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    • 2013
  • Rice blast is one of the most serious disease threatening stable production of rice. Breeding of resistant cultivars has been used as the most effective and useful method to controll rice blast caused by Magnaporthe oryzae. To collect rice blast isolates in fields and test their pathogenicity on new cultivars are important for establishment of new resistant cultivars breeding program of rice. Pathotypes of Korean rice blast isolates have been categorized to Korean differential race system developed in 1985. However, it is little known about genetic background of Korean differential cultivars, so that it is hard to understand for relationship between each pathogen and each host plant at genetic level. In this study, we suggested necessity of a new differential system by analyzing pathogenic responses between 24 monogenic rice lines and 200 Korean rice blast isolates. In addition, we determined the nine representative resistant genes based on the resistance responses of the monogenic lines to rice blast isolates, indexed resistant responses of the monogenic lines to ten representative rice blast isolates and selected 30 Korean representative rice blast isolates proper to Korean system. We think the newly developed differential race system can be broadly used to select resistant cultivars to rice blast in Korea.

Optimizing Artificial Neural Network-Based Models to Predict Rice Blast Epidemics in Korea

  • Lee, Kyung-Tae;Han, Juhyeong;Kim, Kwang-Hyung
    • The Plant Pathology Journal
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    • v.38 no.4
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    • pp.395-402
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    • 2022
  • To predict rice blast, many machine learning methods have been proposed. As the quality and quantity of input data are essential for machine learning techniques, this study develops three artificial neural network (ANN)-based rice blast prediction models by combining two ANN models, the feed-forward neural network (FFNN) and long short-term memory, with diverse input datasets, and compares their performance. The Blast_Weathe long short-term memory r_FFNN model had the highest recall score (66.3%) for rice blast prediction. This model requires two types of input data: blast occurrence data for the last 3 years and weather data (daily maximum temperature, relative humidity, and precipitation) between January and July of the prediction year. This study showed that the performance of an ANN-based disease prediction model was improved by applying suitable machine learning techniques together with the optimization of hyperparameter tuning involving input data. Moreover, we highlight the importance of the systematic collection of long-term disease data.

Temporal and Spatial Blast Incidence in Leading Cultivars and Elite Lines of Rice in Korea (I) (벼 주요 품종 및 계통의 지역별, 연도별 도열병 발병 차이 (I))

  • 라동수;한성숙;김장규
    • Korean Journal Plant Pathology
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    • v.10 no.1
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    • pp.47-53
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    • 1994
  • Incidences of blast caused by Pyricularia grisea Sacc. on 24 leading cultivars and elite lines of rice were investigated in the fields at Icheon, chuncheon, Jecheon, Naju from 1990 to 1992. In the blast nursery, disease index of leaf blast on Jinmibyeo and Ilpumbyeo were very low as 1 to 3 at Naju, but as high as 6 to 9 at Icheon and other Chuncheon in 1990, but the disease did not occur in other locations and years. The most variable incidence of temporal and spatial leaf blast was observed on Nagdongbyeo, which was 30.6% at Icheon and 2.1% at Chuncheon on 1990, but the disease did not occur at Naju during the investigation. Percentages of diseased panicles on Chucheongbyeo were 11.6% in 1990 and 4.3% in 1992 at Icheon. Odaebyeo and Sobaekbyeo revealed more severe blast occurrences at Chuncheon and Sangju where the elevation was higher than the other places. Regional race distributions of rice blast fungus were more variable at Icheon and Chuncheon than the others.

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Blast Resistant Genes Distribution and Resistance Reaction to Blast in Korean Landraces of Rice (Oryza sativa L.)

  • Song, Jae Young;Lee, Gi-An;Choi, Yu-Mi;Lee, Sukyeung;Lee, Kwang Beom;Bae, Chang-Hyu;Jung, Yeonju;Hyun, Do-Yoon;Park, Hong-Jae;Lee, Myung-Chul
    • Korean Journal of Plant Resources
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    • v.27 no.6
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    • pp.687-700
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    • 2014
  • Rice blast (Magnaporthe oryza B.) is one of the most important diseases in rice that causing great yield losses every year around the world. It is important to screen valuable genetic resources for improving blast resistance. This study was conducted to identify the blast resistance in 279 Korean rice landraces using blast nursery tests and isolate inoculum screening. The results showed that 11 landrace accessions found to be resistant to rice blast in blast nursery and inoculation screening tests and the degree of lesions in most accessions showed that they were susceptible to reactions. In order to find the distribution of blast resistant genes, a molecular survey was conducted to identify the presence of major blast resistance (R) gene in 279 Korean landraces. The results revealed that their frequency distribution was Pik-m (36.2%), Piz (25.4%), Pit (13.6%), and Pik (10%). Besides, the frequency distribution of Piz-t, Pii, Pik-m/Pik-p, Pi-39(t), Pib, Pi-d(t)2, Pita/Pita-2 and Pi-ta genes were identified as less than 10%. The results did not consist with the reactions against blast diseases between genotypes and phenotypic part of the nursery tests and isolate inoculation. For concluding these results, we used genome-wide SSR markers that have closely been located with resistance genes. The PCoA analysis showed that the landrace accessions formed largely two distinct groups according to their degree of blast resistance. By comparing genetic diversities using polymorphic information contents (PIC) value among the resistant, total and susceptible landraces, we found that PIC values decreased in four SSR markers and increased in six markers in the resistant accessions, which showed contrary to total and susceptible groups. These regions might be linked to resistance alleles. In this study, we evaluated the degree of blast resistance and the information about the distribution of rice blast resistant genes in Korean rice landraces. This study might be the basis for association analysis of blast resistance in rice.

Effect of agricultural materials of traditional agriculture on control of rice blast (Pyricularia oryzae)

  • Jang, Se Ji;Yun, Young Beom;Kim, Yeon Ji;Jeong, Jang Yong;Kuk, Yong In
    • Proceedings of the Korean Society of Crop Science Conference
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    • 2017.06a
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    • pp.182-182
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    • 2017
  • The objective of this research was to determine controlling effects on rice blast (Pyricularia oryzae) in rice plants by using plant extracts from different extraction methods (water, boiling water, fermentation, and ethanol) from 38 agricultural materials of traditional agriculture. Rice blast was completely suppressed by 3% ethanol extracts in Rheum palmatum roots, and suppressed 97% and 77% by 10% ethanol extracts in onion bulb and pine tree leaves, respectively in a laboratory test. However, other agricultural materials showed low effect on suppression of rice blast. Additionally, in a seedling test, rice injury of two cultivars (Ilmibyeo and Hopyoungbyeo) against rice blast was reduced 40-71%, 29-63%, and 23-63% by 5 and 10% ethanol extracts in Rheum palmatum roots, onion bulb, and pine tree leaves, respectively, compared with non-treated controls. Rice injury of two cultivars (Ilmibyeo and Hopyoungbyeo) against rice blast was reduced by 21-55%, 23-46%, and 5-39% in response to Rheum palmatum roots, onion bulb, and pine tree leaf applications at 100, 200 and $400g/m^2$ at 0 day after seeding, respectively, compared with non-treated controls. Rice plants did not show any leaf injuries and growth reduction after treatments of the Rheum palmatum roots, onion bulb, and pine tree leaf extracts or soil application. Thus, the above materials may be used for controlling rice blast in organically produced rice fields.

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Temporal and Spatial Blast Incidence in Leading Cultivars and Elite Lines of rice in Korea(II) (벼 주요 품종 및 계통의 지역별, 연도별 도열병 발병 차이(II))

  • 라동수;한성숙;김장규
    • Korean Journal Plant Pathology
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    • v.10 no.2
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    • pp.123-128
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    • 1994
  • Incidence of blast caused by Pyricularia grisea Sacc. on 21 leading cultivars and elite lines of rice was investigated in different locations such as Icheon, Chuncheon, Jecheon, and Naju during three years from 1991 to 1993. Disease index of leaf blast of Dongjinbyeo was high in the blast nursery with range 4 to 9 at Naju, but low at other locations with range 1 to 4. Percentages of diseased leaf area of Joryungbyeo and Daelipbyeo 1 were 4.3 and 12%, respectively in the fields at Jecheon in 1993, but were much lower in the other locations during three years. The incidences of leaf blast of Daelipbyeo 1 were 0.3 and 12.0% at Chuncheon and Jecheon, respectively in 1993, but no disease occurred at Naju during three years. Percentage of diseased panicles of Joryungbyeo was 100% at Icheon and Jecheon in 1993, 92.4% in Suweon 390 at Icheon on 1991 and 100% in Jinbu 15 at Jecheon on 1993. Race distribution of rice blast fungus at Icheon and Jecheon was more varied than that of the other locations.

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Utilization of Weather, Satellite and Drone Data to Detect Rice Blast Disease and Track its Propagation (벼 도열병 발생 탐지 및 확산 모니터링을 위한 기상자료, 위성영상, 드론영상의 공동 활용)

  • Jae-Hyun Ryu;Hoyong Ahn;Kyung-Do Lee
    • Korean Journal of Agricultural and Forest Meteorology
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    • v.25 no.4
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    • pp.245-257
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    • 2023
  • The representative crop in the Republic of Korea, rice, is cultivated over extensive areas every year, which resulting in reduced resistance to pests and diseases. One of the major rice diseases, rice blast disease, can lead to a significant decrease in yields when it occurs on a large scale, necessitating early detection and effective control of rice blast disease. Drone-based crop monitoring techniques are valuable for detecting abnormal growth, but frequent image capture for potential rice blast disease occurrences can consume significant labor and resources. The purpose of this study is to early detect rice blast disease using remote sensing data, such as drone and satellite images, along with weather data. Satellite images was helpful in identifying rice cultivation fields. Effective detection of paddy fields was achieved by utilizing vegetation and water indices. Subsequently, air temperature, relative humidity, and number of rainy days were used to calculate the risk of rice blast disease occurrence. An increase in the risk of disease occurrence implies a higher likelihood of disease development, and drone measurements perform at this time. Spectral reflectance changes in the red and near-infrared wavelength regions were observed at the locations where rice blast disease occurred. Clusters with low vegetation index values were observed at locations where rice blast disease occurred, and the time series data for drone images allowed for tracking the spread of the disease from these points. Finally, drone images captured before harvesting was used to generate spatial information on the incidence of rice blast disease in each field.

Analysis of Korean japonica rice cultivars using molecular markers associated with blast resistance genes

  • Suh, Jung-Pil;Roh, Jae-Hwan;Cho, Young-Chan;Han, Seong-Sook;Jeon, Yong-Hee;Kang, Kyung-Ho;Kim, Yeon-Gyu
    • Korean Journal of Breeding Science
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    • v.40 no.3
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    • pp.215-222
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    • 2008
  • Fifty-two Korean japonica rice cultivars were analyzed for leaf blast resistance and genotyped with 4 STS and 26 SSR markers flanking the specific chromosome sites linked with blast resistance genes. In our analysis of resistance genes in 52 japonica cultivars using STS markers tightly linked to Pib, Pita, Pi5(t) and Pi9(t), the blast nursery reaction of the cultivars possessing the each four major genes were not identical to that of the differential lines. Eight of the 26 SSR markers were associated with resistant phenotypes against the isolates of blast nursery as well as the specific Korean blast isolates, 90-008 (KI-1113), 03-177 (KJ-105). These markers were linked to Pit, Pish, Pib, Pi5(t), Piz, Pia, Pik, Pi18, Pita and Pi25(t) resistance gene loci. Three of the eight SSR markers, MRG5836, RM224 and RM7102 only showed significantly associated with the phenotypes of blast nursery test for two consecutive years. These three SSR markers also could distinguish between resistant and susceptible japonica cultivars. These results demonstrate the usefulness of marker-assisted selection and genotypic monitoring for blast resistance of rice in blast breeding programs.

Development of Virulence Test Methods for Neck and Panicle Blast Disease (벼에 발생하는 목 도열병 및 이삭 도열병 검정을 위한 실험방법 개발)

  • Chi, Myoung-Hwan;Park, Sook-Young
    • Research in Plant Disease
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    • v.21 no.2
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    • pp.103-106
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    • 2015
  • Isolates of the rice blast fungus show a range of tissue-specificities infecting leaves, nodes, neck and panicles. Although neck and panicle blast cause significantly greater yield losses than the leaf blast, virulence tests of the blast isolates have been performed only rice leaves instead of neck and panicles. In this study, we have developed a virulence test method for neck and panicle blast. We selected three representative isolates from each of leaf, neck, and panicle blast. We observed that severe disease lesions developed on the neck and the panicles when the infected rice plants were incubated in a dew chamber for 48 h instead of 24 h when tested on leaves. Unlike the leaf blast, a typical lesion on the neck and panicles appeared after 14 days post-infection as opposed to 7 days with leaf blast. This method will be applied to examine tissue-specificity of the rice blast fungus isolates.

Screening of Rice Cultivars for Adult-Plant Resistance to Pyricularia oryzae (도열병에 대해 성체식물 저항성을 지닌 벼 품종의 선발)

  • Koh Young Jin;Hwang Byung Kook;Chung Hoo Sup
    • Korean Journal Plant Pathology
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    • v.2 no.2
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    • pp.69-81
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    • 1986
  • Thirty two rice cultivars which have been cultivated or used as breeding materials in Korea were tested for screening rice cultivars resistant to leaf blast at adult-plant stages in the blast nursery hill plots. When compared on the basis of disease severities in individual leaves at different growth stages of rice plants under natural field infection, the 16 indica-japonica hybrids tested were highly resistant but the 16 japonica cultivars tested showed various degrees of resistance to leaf blast. With aging of rice plants, the quantitative levels of resistance to leaf blast increased in all the cultivars, although the levels of resistance to leaf blast varied according to rice genotypes. The leaf position of rice plants in which changed from susceptible to resistant reactions varied also with rice genotypes. The susceptible reactions of the rice cultivars to Pyricularia oryzae were distinctly changed to a resistant reaction on upper leaves of rice plants. The rice cultivars, in which the quantitative level of resistance to leaf blast was higher, were resistant on the lower leaves of rice plants. The cultivars Akibare, Palkeum, Jinheung, Olchal, Dobong and Ginga which drastically decreased blast infection at late growth stage were evaluated as adult-plant-resistant to leaf blast in the field. The adult-plant-resistant cultivars became resistant to leaf blast, both qualitatively and quantitatively, as rice plants matured.

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