• Title/Summary/Keyword: resistance detection

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Rapid Detection of Vancomycin-resistance Enterococci by SYBR Green Real-time PCR

  • Yang, Byoung-Seon
    • Korean Journal of Clinical Laboratory Science
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    • v.46 no.2
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    • pp.64-67
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    • 2014
  • Vancomycin-resistant Enterococci (VRE) are a leading cause of a nosocomial infection. While seven glycopeptide resistance genotypes have been found in Enterococci, vanA and vanB are the most common resistance genotypes. Aims of this study were to detect antibiotic susceptibilities of 23 Enterococcus spp, which broke out in a university hospital by the disk diffusion test, to investigate specific genes of vanA and vanB by conventional and real-time PCR. PCR for vanA and vanB was performed on 23 Enterococci, all 23 were positive for vanA type. This study reports the validation of a simple and rapid VRE detection method that can be easily incorporated into the daily routine of a clinical laboratory. Early detection of VRE strains, including those with susceptibility to Vancomycin, is of paramount clinical importance, as it allows a rapid initiation of strict infection control practices as well as a therapeutic guidance for a confirmed infection. The real-time PCR method is a rapid technique to detect vanA in Enterococci. It is simple and reliable for the rapid characterization of VRE.

Development of multiplex PCR for detection of vancomycin resistant enterococci(VRE) and epidemiological application in Korea

  • Seo, Keun-seok;Song, Deok-jln;Gwyther, M.M.;Park, Yong-ho
    • Korean Journal of Veterinary Research
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    • v.39 no.2
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    • pp.343-352
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    • 1999
  • Vancomycin resistant enterococci (VRE) have emerged as an important nosocomial pathogen. Since 1989 the Center for Disease Control, United States, has reported a rapid increase in the incidence of enterococcal bacteremia and endocarditis infection by VRE. It was suggested that the use of avoparcin was associated with the appearance of VRE in animal husbandry. To date, several detection methods have been used based on conventional methods of culture and gene detection. However, these methods have some limitations such as time-consuming, laborious and additional differential needs. Therefore, In this study a multiplex PCR method was established to detect and differentiate resistance types of enterococci which specifically amplify the four van genes encoding vancomycin resistance elements. Using the method, we investigated the incidence rates and types of VRE from farms using or not using avoparcin. A total of 1091 animal fecal samples were collected from 70 pig and 32 poultry farms. A total of 425 of enterococci were isolated from samples. Of the 425 isolates, 11 of the them showed a pattern of high-level vancomycin resistance (MIC : $64{\sim}256{\mu}g/ml$) which was associated with the presence of the vanA or vanB gene. Fifty-seven isolates showed a pattern of low-level vancomycin resistance (MIC : $3{\sim}8{\mu}g/ml$) associated with the vanC-1 or vanC-2 gene. Interestingly, all isolates with high-level vancomycin resistance were from farms that have never used avoparcin. Moreover, the high-level VRE isolation rate in Korea (2.58%) was much lower than that of other countries (50% in England, 7% in Belgium) where avoparcin have been used. In conclusion, the multiplex PCR method established in this study could be applied for detection of VRE.

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Detection of thin-layered soil using CRPT in soft soil (CRPT를 이용한 연약지반 협재층 탐지)

  • Yoon, Hyung-Koo;Kim, Joon-Han;Kim, Rae-Hyun;Choi, Yong-Kyu;Lee, Jong-Sub
    • Proceedings of the Korean Geotechical Society Conference
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    • 2008.10a
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    • pp.117-125
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    • 2008
  • The detection of thin-layered soil is important in soft soils to evaluate the soil behavior. The smaller diameter cone penetrometer have been commonly used to detect the layer with increasing sensitivity. The objective of this study is to detect the thin-layered soil using cone resistance and electrical resistance. The cone resistivity penetration test (CRPT) is developed to evaluate the cone tip resistance and electrical resistance at the tip. The CRPT is a micro-cone which has a $0.78cm^2$ in projected area. The application test is conducted in a laboratory large-scale consolidometer (calibration chamber). The kaolinite, sand and water are mixed to make the specimen at the liquid limit of 46% using a slurry mixer. It takes two months for the consolidation of the specimen. After consolidation, the CRPT test is carried out. Furthermore the standard CPT results are compared with the electrical resistance measured at the tip in the field. This study suggests that the CRPT may be a useful tool for detecting thin-layers in soft soils.

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Comparison of Various Methods for Estrus Stage Determination in Bitch (개의 발정 진단 방법에 따른 효율 비교)

  • Ko, Young-Jin;Kang, Eun-Ju;Lee, Sung-Lim
    • Journal of Embryo Transfer
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    • v.24 no.3
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    • pp.131-137
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    • 2009
  • In dogs, correct diagnosis of estrus is important and the exact time of ovulation can be determined by variouse methods. Vaginal cytology has commonly used in conjunction with the physical examination, clinical history, vaginoscopy, and hormonal assays to determine the stage of the reproductive cycle. This study was therefore investigated the effectiveness of direct ovulation detector designed by changes of electrical resistance in vaginal mucus following different estrus cycles with several methods; vaginal cytology, concentration of plasma estrogen and progesterone, and direct examination by laparotomy. A total of 12 bitches was selected for the study and observed estrus signs. The bitches were evaluated clinical sign (vulvar swelling and bleeding), cytological examination (keratocyte and RBC), electrical resistance, plasma estrogen and progesterone concentration for estrus assessment. Accuracy of ovulation detection by vaginal cytology was significantly (p<0.05) lower than those by electrical resistance and plasma progesterone concentration, based on the confirmation by laparotomy. Vaginal smear is not confidential method compared to detection of electrical resistance and plasma progesterone concentration at ovulation. Although the value of electrical resistance was varied at the same points of estrus in individuals, ovulation was occurred at the first day which shown the peak of electrical resistance and mating time was third day after peak. In conclusion, ovulation detector designed by changes of electrical resistance is an effective and economic instrument for predicting estrus and ovulation in bitches.

A Study on Measurement Technique of Insulation Resistance for Non-interrupting Inspection Using Non-contact Voltage Phase Detection Technology (비접촉 전압위상 검출 기술을 이용한 무정전 절연저항 측정 방법에 관한 연구)

  • Lee, Ki-Yeon;Moon, Hyun-Wook;Kim, Dong-Woo;Lim, Young-Bae;Choi, Dong-Hwan;Kim, Yong-Hyeok
    • The Transactions of The Korean Institute of Electrical Engineers
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    • v.67 no.8
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    • pp.1106-1112
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    • 2018
  • In this paper, measurement techniques are presented to test the performance of insulation without interruption if it is difficult to measure insulation resistance. Especially, non-contact voltage phase detection techniques have been developed that can be applied in environments where it is difficult to find voltage measurement locations such as component receptors. The performance verification of the non-interrupting insulation resistance measuring devices has been tested against existing products using standard calibration equipment and test jigs. The validation confirmed performance within 2 % for direct contact type and within 10 % for non-contact type. In addition, the procedure to make continuous insulation test using the equipment was proposed.

Development of Photo-diode for LOC fluorescence detector (LOC 형광검출 소자를 위한 광 다이오드의 제작 및 특성 평가)

  • Kim, Ju-Hwan;Shin, Kyeong-Sik;Kim, Yong-Kook;Kim, Sang-Sik;Ju, Byeong-Kwon
    • Proceedings of the Korean Institute of Electrical and Electronic Material Engineers Conference
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    • 2003.04a
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    • pp.100-103
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    • 2003
  • Signal detection technologies such as fluorescence, charge and electrochemical detection used in the monolithic capillary electrophoresis system to convert the biochemical reaction into the electrical signal. The fluorescence detection using photodiodes that measure fluorescence emitted from eluting molecules is widely used for the monolithic capillary electrophoresis system. In this paper, in order to fabricate a photosensor has the increased sensitivity, we investigated on the sensitivity of general type and p-i-n type diode. The p-i-n diode has higher sensitivity than photodiode. Considering these results, we fabricated p-i-n diodes on the high resistive$(4k{\Omega}{\cdot}cm)$ wafer into rectangle and finger pattern and compared internal resistance of each pattern. The internal resistance of p-i-n diode can be decreased by the application of finger pattern has parallel resistance structure from $571{\Omega}$ to $393{\Omega}$.

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Fabrication and Properties of Self-diagnosis GFRP for Low Loading (저하중용 자기진단 GFRP의 제조와 특성)

  • Shin, Soon-Gi;Lim, Hyun-Ju;Lee, Jun-Hee
    • Korean Journal of Materials Research
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    • v.13 no.11
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    • pp.732-736
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    • 2003
  • A CP-GFRP(Carbon Powder-Glass Fiber Reinforced Plastic) sensor was fabricated for fracture detection. The electric resistance of the sensor was measured on condition of various composition of carbon powders and thickness of bundle of glass fibers. The resistance of the sensor was decreased as the increase of the content of carbon powders and the TEX of the glass fibers. In the case of loading on CP-GFRP, because inner crack was propagated, the part of percolation structures was disconnected. These observations show the following results. The conduction of CP-GFRP sensor is due to percolation structure of carbon powders and increase of resistance is due to expansion of cracks.

DC Ground Fault Detection System for Photovoltaic Generation (태양광 발전용 직류 지락 검출장치)

  • Jang, Su-Jin;Lee, Jeong-Min;Kim, Wang-Moon;Goo, Tae-Hong;Suh, In-Young
    • 한국신재생에너지학회:학술대회논문집
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    • 2008.05a
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    • pp.408-411
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    • 2008
  • In this paper, a new DC ground fault detection system is proposed, which is suitable for photovoltaic power generation systems. The proposed ground fault systems is superposition of divide resistance and detection circuit. The proposed system has the characteristics of a simplified structure, reduced cost and volume compared with those of the conventional ground fault system for DC source. The operation principle of the proposed systems is described and verified by simulation result.

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Rapid Detection of SdhBP225F and SdhBH272R Mutations in Boscalid Resistant Botrytis cinerea Strains by ARMS-PCR

  • Liu, Xin;Zeng, Rong;Gao, Shigang;Xu, Lihui;Dai, Fuming
    • The Plant Pathology Journal
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    • v.35 no.1
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    • pp.71-76
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    • 2019
  • $SdhB^{P225F}$ and $SdhB^{H272R}$ mutations have been found associated with boscalid resistance in Botrytis cinerea from strawberry in Shanghai, China. For rapid detection of two mutations, tetra-primers were designed and optimized to gain the relatively high accuracy and specificity based on the ARMS-PCR technique, by which resistance can be identified with different lengths of products on agarose gels. The tetra-primer ARMS-PCR systems for $SdhB^{P225F}$ and $SdhB^{H272R}$ were validated by 9 SdhB-squenced strains repeatedly. Then, sensitivity of 30 more strains were also tested by the methods, which were accordant with genotypes by sequencing and the sensitivity of conidial germination to boscalid by 100%. Thus, the methods developed in this study are proved to be rapid, inexpensive, accurate and practical for resistance detection of Botrytis cinerea caused by $SdhB^{P225F}$ and $SdhB^{H272R}$ mutations.

Detection Characteristics and Antimicrobial Resistance of Vibrio vulnificus Isolated from Sea Water Along the Gadeok Island Coast (가덕도 연안 해수에서 분리된 Vibrio vulnificus의 검출 특성 및 항생제 내성)

  • Oh, Hee-Kyung;Jeong, Hee-Jin;Jeong, Geum-Jae;Shin, Hye-Young;Shin, Joong Ho;Jung, Won-Kyo;Oh, Junghwan;Kim, Young-Mog
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.54 no.6
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    • pp.912-917
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    • 2021
  • We investigated the distribution, molecular characteristics, and antimicrobial resistance of Vibrio vulnificus isolated from seawater at Gadeok Island, the Republic of Korea between June to October. Interestingly no isolates were detected between December to February. The detection rate of V. vulnificus was high (80-100%) from July to September 2019 and from June to September 2020. This coincided with the relatively low salinity of the seawater, which ranged from 7.8-29.9 practical salinity units for that period. Additionally, V. vulnificus had a high detection rate at sampling stations near the Nakdong river. The detection rates of virulence genes, such as vvhA, viuB, and vcgC, among the isolates were 97.1%, 44.1%, and 57.4% in 2019 and 100%, 43.0%, and 50.0% in 2020, respectively. Notably, viuB and vcgC were detected in V. vulnificus isolated between June to October when water temperature was above 20℃. The antimicrobial susceptibility analysis of 80 isolates revealed that most of the strains were susceptible to most antimicrobial agents. However, some isolates showed intermediate resistance to cefepime (18.8%), cefoxitin (58.8%), and erythromycin (22.5%). Of note, 3.8% of the tested strains were resistant to cefoxitin. The minimum inhibitory concentration of highly cefoxitin-resistant strains was determined to be less than 32 ㎍/mL.