• 제목/요약/키워드: relative homology

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FOUNDATIONS OF THE THEORY OF ℓ1 HOMOLOGY

  • Park, Hee-Sook
    • 대한수학회지
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    • 제41권4호
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    • pp.591-615
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    • 2004
  • In this paper, we provide the algebraic foundations to the theory of relative $\ell$$_1$ homology. In particular, we prove that $\ell$$_1$ homology of topological spaces, both for the absolute case and for the relative case, depends only on their fundamental groups. We also provide a .proof of Gromov's Equivalence theorem for $\ell$$_1$ homology, stated by Gromov without proof [4].

DIGITAL HOMOLOGY GROUPS OF DIGITAL WEDGE SUMS

  • Kang, Jeang Min;Han, Sang-Eon
    • 호남수학학술지
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    • 제38권4호
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    • pp.819-831
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    • 2016
  • The present paper investigates some properties of the digital homology in [1, 4, 5] and points out some unclearness of the definition of a digital homology and further, suggests a suitable form of a digital homology. Finally, we calculate a digital homology group and a relative digital homology group of some digital wedge sums. Finally, the paper corrects some errors in [6]. In the present paper all digital images (X, k) are assumed to be non-empty and k-connected.

BALANCE FOR RELATIVE HOMOLOGY WITH RESPECT TO SEMIDUALIZING MODULES

  • Di, Zhenxing;Zhang, Xiaoxiang;Chen, Jianlong
    • 대한수학회보
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    • 제52권1호
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    • pp.137-147
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    • 2015
  • We derive in the paper the tensor product functor -${\otimes}_R$- by using proper $\mathcal{GP}_C$-resolutions, where C is a semidualizing module. After giving several cases in which different relative homologies agree, we use the Pontryagin duals of $\mathcal{G}_C$-projective modules to establish a balance result for such relative homology over a Cohen-Macaulay ring with a dualizing module D.

COLOCALIZATION OF LOCAL HOMOLOGY MODULES

  • Rezaei, Shahram
    • 대한수학회보
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    • 제57권1호
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    • pp.167-177
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    • 2020
  • Let I be an ideal of Noetherian local ring (R, m) and M an artinian R-module. In this paper, we study colocalization of local homology modules. In fact we give Colocal-global Principle for the artinianness and minimaxness of local homology modules, which is a dual case of Local-global Principle for the finiteness of local cohomology modules. We define the representation dimension rI (M) of M and the artinianness dimension aI (M) of M relative to I by rI (M) = inf{i ∈ ℕ0 : HIi (M) is not representable}, and aI (M) = inf{i ∈ ℕ0 : HIi (M) is not artinian} and we will prove that i) aI (M) = rI (M) = inf{rIR𝖕 (𝖕M) : 𝖕 ∈ Spec(R)} ≥ inf{aIR𝖕 (𝖕M) : 𝖕 ∈ Spec(R)}, ii) inf{i ∈ ℕ0 : HIi (M) is not minimax} = inf{rIR𝖕 (𝖕M) : 𝖕 ∈ Spec(R) ∖ {𝔪}}. Also, we define the upper representation dimension RI (M) of M relative to I by RI (M) = sup{i ∈ ℕ0 : HIi (M) is not representable}, and we will show that i) sup{i ∈ ℕ0 : HIi (M) ≠ 0} = sup{i ∈ ℕ0 : HIi (M) is not artinian} = sup{RIR𝖕 (𝖕M) : 𝖕 ∈ Spec(R)}, ii) sup{i ∈ ℕ0 : HIi (M) is not finitely generated} = sup{i ∈ ℕ0 : HIi (M) is not minimax} = sup{RIR𝖕 (𝖕M) : 𝖕 ∈ Spec(R) ∖ {𝔪}}.

Chronological Switch from Translesion Synthesis to Homology-Dependent Gap Repair In Vivo

  • Fujii, Shingo;Isogawa, Asako;Fuchs, Robert P.
    • Toxicological Research
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    • 제34권4호
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    • pp.297-302
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    • 2018
  • Cells are constantly exposed to endogenous and exogenous chemical and physical agents that damage their genome by forming DNA lesions. These lesions interfere with the normal functions of DNA such as transcription and replication, and need to be either repaired or tolerated. DNA lesions are accurately removed via various repair pathways. In contrast, tolerance mechanisms do not remove lesions but only allow replication to proceed despite the presence of unrepaired lesions. Cells possess two major tolerance strategies, namely translesion synthesis (TLS), which is an error-prone strategy and an accurate strategy based on homologous recombination (homology-dependent gap repair [HDGR]). Thus, the mutation frequency reflects the relative extent to which the two tolerance pathways operate in vivo. In the present paper, we review the present understanding of the mechanisms of TLS and HDGR and propose a novel and comprehensive view of the way both strategies interact and are regulated in vivo.

Zearalenone regulates key factors of the Kelch-like erythroid cell-derived protein with CNC homology-associated protein 1-nuclear factor erythroid 2-related factor 2 signaling pathway in duodenum of post-weaning gilts

  • Cheng, Qun;Jiang, Shu zhen;Huang, Li bo;Yang, Wei ren;Yang, Zai bin
    • Animal Bioscience
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    • 제34권8호
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    • pp.1403-1414
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    • 2021
  • Objective: This study explored the mechanism of the Kelch-like erythroid cell-derived protein with CNC homology-associated protein 1 (Keap1)-nuclear factor erythroid 2-related factor 2 (Nrf2) signaling pathway under conditions of zearalenone (ZEA)-induced oxidative stress in the duodenum of post-weaning gilts. Methods: Forty post-weaning gilts were randomly allocated to four groups and fed diets supplemented with 0, 0.5, 1.0, or 1.5 mg/kg ZEA. Results: The results showed significant reductions in the activity of the antioxidant enzymes total superoxide dismutase and glutathione peroxidase and increases the malondialdehyde content with increasing concentrations of dietary ZEA. Immunohistochemical analysis supported these findings by showing a significantly increased expression of Nrf2 and glutathione peroxidase 1 (GPX1) with increasing concentrations of ZEA. The relative mRNA and protein expression of Nrf2, GPX1 increased linearly (p<0.05) and quadratically (p<0.05), which was consistent with the immunohistochemical results. The relative mRNA expression of Keap1 decreased linearly (p<0.05) and quadratically (p<0.05) in the duodenum as the ZEA concentration increased in the diet. The relative mRNA expression of modifier subunit of glutamate-cysteine ligase (GCLM) increased quadratically (p<0.05) in all ZEA treatment groups and the relative mRNA expression of quinone oxidoreductase 1 (NQO1) catalytic subunit of glutamate-cysteine ligase decreased linearly (p<0.05) and quadratically (p<0.05) in the ZEA1.0 group and ZEA1.5 group. The relative protein expression of Keap1 and GCLM decreased quadratically (p<0.05) in the duodenum as the ZEA concentration increased in the diet, respectively. The relative protein expression of NQO1 increased linearly (p<0.05) and quadratically (p<0.05) in all ZEA treatment groups in the duodenum. Conclusion: These findings suggest that ZEA regulates the expression of key factors of the Keap1-Nrf2 signaling pathway in the duodenum, which enables resistance to ZEA-induced oxidative stress. Further studies are needed to examine the effects of ZEA induced oxidative stress on other tissues and organs in post-weaning gilts.

TWO DIMENSIONAL ARRAYS FOR ALEXANDER POLYNOMIALS OF TORUS KNOTS

  • Song, Hyun-Jong
    • 대한수학회논문집
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    • 제32권1호
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    • pp.193-200
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    • 2017
  • Given a pair p, q of relative prime positive integers, we have uniquely determined positive integers x, y, u and v such that vx-uy = 1, p = x + y and q = u + v. Using this property, we show that$${\sum\limits_{1{\leq}i{\leq}x,1{\leq}j{\leq}v}}\;{t^{(i-1)q+(j-1)p}\;-\;{\sum\limits_{1{\leq}k{\leq}y,1{\leq}l{\leq}u}}\;t^{1+(k-1)q+(l-1)p}$$ is the Alexander polynomial ${\Delta}_{p,q}(t)$ of a torus knot t(p, q). Hence the number $N_{p,q}$ of non-zero terms of ${\Delta}_{p,q}(t)$ is equal to vx + uy = 2vx - 1. Owing to well known results in knot Floer homology theory, our expanding formula of the Alexander polynomial of a torus knot provides a method of algorithmically determining the total rank of its knot Floer homology or equivalently the complexity of its (1,1)-diagram. In particular we prove (see Corollary 2.8); Let q be a positive integer> 1 and let k be a positive integer. Then we have $$\begin{array}{rccl}(1)&N_{kq}+1,q&=&2k(q-1)+1\\(2)&N_{kq}+q-1,q&=&2(k+1)(q-1)-1\\(3)&N_{kq}+2,q&=&{\frac{1}{2}}k(q^2-1)+q\\(4)&N_{kq}+q-2,q&=&{\frac{1}{2}}(k+1)(q^2-1)-q\end{array}$$ where we further assume q is odd in formula (3) and (4). Consequently we confirm that the complexities of (1,1)-diagrams of torus knots of type t(kq + 2, q) and t(kq + q - 2, q) in [5] agree with $N_{kq+2,q}$ and $N_{kq+q-2,q}$ respectively.

Identification of ${\omega}$-Aminotransferase from Caulobacter crescentus and Sitedirected Mutagenesis to Broaden Substrate Specificity

  • Hwang, Bum-Yeol;Ko, Seung-Hyun;Park, Hyung-Yeon;Seo, Joo-Hyun;Lee, Bon-Su;Kim, Byung-Gee
    • Journal of Microbiology and Biotechnology
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    • 제18권1호
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    • pp.48-54
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    • 2008
  • A putative ${\omega}$-aminotransferase gene, cc3143 (aptA), from Caulobacter crescentus was screened by bioinformatical tools and overexpressed in E. coli, and the substrate specificity of the ${\omega}$-aminotransferase was investigated. AptA showed high activity for short-chain ${\beta}$-amino acids. It showed the highest activity for 3-amino-n-butyric acid. It showed higher activity toward aromatic amines than aliphatic amines. The 3D model of the ${\omega}$-aminotransferase was constructed by homology modeling using a dialkylglycine decarboxylase (PDB ID: 1DGE) as a template. Then, the ${\omega}$-aminotransferase was rationally redesigned to increase the activity for 3-amino-3-phenylpropionic acid. The mutants N285A and V227G increased the relative activity for 3-amino-3-phenylpropionic acid to 3-amino-n-butyric acid by 11-fold and 3-fold, respectively, over that of wild type.

nif-Gene Organization and Nucleotide Sequence of nifV, nifH, D, K and nifE from Frankia Strain FaCl

  • An, Chung-Sun
    • 한국동물학회:학술대회논문집
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    • 한국동물학회 1995년도 한국생물과학협회 학술발표대회
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    • pp.120-120
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    • 1995
  • The total size of the pF AR1, a genomic clone of Frankia FaCI, was estimated to be about 44Kb by summation of the individual fragment length generated by single or double restriction enzymes. Southern hybridization analyses with Azotobacter vinelandii nif-genes as probes and partial sequencing analyses of the subclones revealed that organization of the nif-gene in the FaCI strain was nifV, H, D, K, E, N, X, W, B. The organization of the structural genes for nitrogenase is the same in this Frankia strain as it is in most other nitrogen-fixing prokaryotes but the positioning of the nifV-like gene relative to the nifHDK cluster differs. A consensus nif-promoter-like sequence, found at 5' of nifH, was not detected upstream of the niJV-like gene. nifV-like gene contained a ORF of 1206 NT encoding 401 amino acids. The nucleotide sequence and deduced amino acid sequence of the gene exhibit homology value of 65% and 41% with that from A vinelandii, respectively. The putative Shine-Dargamo sequences were present preceding nitK, nifH, D, K, and nifE, and in nitK gene putative start codon GTG was detected instead of A TG. The nucleotide and amino acid sequence of niIK of FaCI showed 82% and 76% homolgy with those of Frankia HFPCc 13, respectively. Amino acid sequence of niIK showed 69% and 61% homology with those of A vinelandii, Klebsiella pnewnoniae, respectively, while that of nifE 73% and 71%, respecti vely.i vely.

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