• 제목/요약/키워드: proteomic

검색결과 502건 처리시간 0.029초

Proteomic Analysis of Immunized Bombyx mori Larvae

  • Song, Kyung-Han;Jung, Su-Jin;Seo, Young-R.;Kang, Seok-Woo;Han, Sung-Sik
    • 한국잠사학회:학술대회논문집
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    • 한국잠사학회 2004년도 International Conference of Sericultural and Entomological Sciences
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    • pp.70-70
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    • 2004
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Retrieving Protein Domain Encoding DNA Sequences Automatically Through Database Cross-referencing

  • Choi, Yoon-Sup;Yang, Jae-Seong;Ryu, Sung-Ho;Kim, Sang-Uk
    • Bioinformatics and Biosystems
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    • 제1권2호
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    • pp.95-98
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    • 2006
  • Recent proteomic studies of protein domains require high-throughput and systematic approaches. Since most experiments using protein domains, the modules of protein-protein interactions, require gene cloning, the first experimental step should be retrieving DNA sequences of domain encoding regions from databases. For a large scale proteomic research, however, it is a laborious task to extract a large number of domain sequences manually from several inter-linked databases. We present a new methodology to retrieve DNA sequences of domain encoding regions through automatic database cross-referencing. To extract protein domain encoding regions, it traverses several inter-connected database with validation process. And we applied this method to retrieve all the EGF domain encoding DNA sequences of homo sapiens. This new algorithm was implemented using Python library PAMIE, which enables to cross-reference across distinct databases automatically.

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