• Title/Summary/Keyword: proportional expression

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Eicosapentaenoic Acid (EPA) Biosynthetic Gene Cluster of Shewanella oneidensis MR-1: Cloning, Heterologous Expression, and Effects of Temperature and Glucose on the Production of EPA in Escherichia coli

  • Lee, Su-Jin;Jeong, Young-Su;Kim, Dong-Uk;Seo, Jeong-Woo;Hur, Byung-Ki
    • Biotechnology and Bioprocess Engineering:BBE
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    • v.11 no.6
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    • pp.510-515
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    • 2006
  • The putative EPA synthesis gene cluster was mined from the entire genome sequence of Shewanella oneidensis MR-1. The gene cluster encodes a PKS-like pathway that consists of six open reading frames (ORFs): ORFSO1602 (multi-domain beta-ketoacyl synthase, KS-MAT-4ACPs-KR), ORFSO1600 (acyl transferase, AT), ORFSO1599 (multi-domain beta-ketoacyl synthase, KS-CLF-DH-DH), ORFSO1597 (enoyl reductase, ER), ORFSO1604 (phosphopentetheine transferase, PPT), and ORFSO1603 (transcriptional regulator). In order to prove involvement of the PKS-like machinery in EPA synthesis, a 20.195-kb DNA fragment containing the genes was amplified from S. oneidensis MR-1 by the long-PCR method. Its identity was confirmed by the methods of restriction enzyme site mapping and nested PCR of internal genes orfSO1597 and orfSO1604. The DNA fragment was cloned into Escherichia coli using cosmid vector SuperCos1 to form pCosEPA. Synthesis of EPA was observed in four E. coli clones harboring pCosEPA, of which the maximum yield was 0.689% of the total fatty acids in a clone designated 9704-23. The production yield of EPA in the E. coli clone was affected by cultivation temperature, showing maximum yield at $20^{\circ}C$ and no production at $30^{\circ}C$ or higher. In addition, production yield was inversely proportional to glucose concentration of the cultivation medium. From the above results, it was concluded that the PKS-like modules catalyze the synthesis of EPA. The synthetic process appears to be subject to regulatory mechanisms triggered by various environmental factors. This most likely occurs via the control of gene expression, protein stability, or enzyme activity.

ST Reliability and Connectivity of VANETs for Different Mobility Environments

  • Saajid, Hussain;DI, WU;Memon, Sheeba;Bux, Naadiya Khuda
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • v.13 no.5
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    • pp.2338-2356
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    • 2019
  • Vehicular ad-hoc network (VANET) is the name of technology, which uses 'mobile internet' to facilitate communication between vehicles. The aim is to ensure road safety and achieve secure communication. Therefore, the reliability of this type of networks is a serious concern. The reliability of VANET is dependent upon proper communication between vehicles within a given amount of time. Therefore a new formula is introduced, the terms of the new formula correspond 1 by 1 to a class special ST route (SRORT). The new formula terms are much lesser than the Inclusion-Exclusion principle. An algorithm for the Source-to-Terminal reliability was presented, the algorithm produced Source-to-Terminal reliability or computed a Source-to-Terminal reliability expression by calculating a class of special networks of the given network. Since the architecture of this class of networks which need to be computed was comparatively trivial, the performance of the new algorithm was superior to the Inclusion-Exclusion principle. Also, we introduce a mobility metric called universal speed factor (USF) which is the extension of the existing speed factor, that suppose same speed of all vehicles at every time. The USF describes an exact relation between the relative speed of consecutive vehicles and the headway distance. The connectivity of vehicles in different mobile situations is analyzed using USF i.e., slow mobility connectivity, static connectivity, and high mobility connectivity. It is observed that $p_c$ probability of connectivity is directly proportional to the mean speed ${\mu}_{\nu}$ till specified threshold ${\mu}_{\tau}$, and decreases after ${\mu}_{\tau}$. Finally, the congested network is connected strongly as compared to the sparse network as shown in the simulation results.

A Study on the Characteristics of Flexibility in Interior Architectural Composition -focused on Mathematical Arrangement Organization- (실내공간구성의 가변적 표현특성에 관한 연구 -수학적 배열원리를 중심으로-)

  • 이주현;신홍경
    • Korean Institute of Interior Design Journal
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    • no.21
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    • pp.10-16
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    • 1999
  • Mathematics is considered to the beginning of designing thinking because of the sense of logical order system. In this study, it was regarded the mathematics as the logic and the measurement of design system. as is often the case in history, mathematics, it is regard as conceptual model of architectural though, as aesthetic proportional measure and the mirror of thought. The direction of this study is rather multi-sided approaching to the spatial concept than one-sided plane. It is multi-acceptable way to apply mathematical principle to the pace and to be a flexible one. And boundary of interpretation of the flexibility means potential use-ability, and the strictly meaning of flexibility means that the acception of the various Secession and the Change of space. And the various interpretation of the flexibility only can expressed in the relation of opposite concept: the assembly and the disassembly, the expand and the decease, the open and the close and the construct and the de-construct. Mathematics provide the resonable way in architectural thinking and endow the order as logical organizatiov. Regarding these facts, this research is for making it possible to consider the expression property of interior space combination as the way of understanding the accepting of the changes of the times with the mathematical induction, using the rational method like the mathematical arrangement organizatiov.

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Comparisons of Adsorption-Desorption Characteristics of Major 10 Kinds Components Consisting of Gasoline Vapor (유증기를 구성하는 주요 10종류 성분의 온도에 따른 흡·탈착특성 비교)

  • Lee, Song-Woo;Na, Young-Soo;Lee, Min-Gyu
    • Journal of Environmental Science International
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    • v.23 no.9
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    • pp.1593-1600
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    • 2014
  • Adsorption and desorption characteristics of the representative 10 kinds components consisting of gasoline vapor on activated carbon were investigated at the temperature range of $-30^{\circ}C{\sim}25^{\circ}C$. The breakthrough curves of each vapors obtained by the Thomas model were well described the breakthrough experimental results of this study. The breakthrough times of each vapors were correlated with the molecular weight, density, and vapor pressure. The breakthrough times had greater correlation with boiling point than molecular weight and density. The slope of the breakthrough curve was a proportional relationship with the rate constant (k) of Thomas model expression. The higher the slope of the breakthrough curve, the rate constant was larger. The biggest slope vapor had the smallest adsorption capacity ($q_e$). Adsorption and desorption characteristics of mixed vapor similar to the gasoline vapor were studied at room temperature ($25^{\circ}C$). The mixed vapor consisting of 9 components; group A (pentane, hexene, hexane), group B (benzene, toluene), group C (octane, ethylbenzene, xylene, nonane) was examined. Group A was not nearly adsorbed because of substitution by group C, and the desorption capacity of group A was smaller than group C. The adsorbed substances were confirmed to be Group C.

Sequential analysis of cell differentials and $IFN-{\gamma}$ production of splenocytes from mice infected with Toxopluma gondii

  • Lee, Young-Ha;Shin, Dae-Whan;Kasper, Lloyd-H.
    • Parasites, Hosts and Diseases
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    • v.38 no.2
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    • pp.85-90
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    • 2000
  • To assess the relationship between the changes of cellular components and the production of Th 1 cytokine in the immune tissue, inbred C57BL/6 mice were orally infected with 40 cysts of 76K strain of Toxoplosma gondii. The sequential change of cell differentials and $IFN-{\gamma}$ production of splenocytes were analyzed by Diff-Quik stain and RT-PCR. There were no significant proportional changes of cellular components of splenocytes until day 4 postinfection (Pl) as compared to those of day 0, and the relative percentage of macrophages and neutrophils/eosinophils increased significantly (p<0.01) thereafter. The expression of $IFN-{\gamma}$ mRNA of $CD3^{-}$ cells was observed from day 1 Pl at a low level. However, $IFN-{\gamma}$ production of $CD3^{+}$ cells increased significantly from day 4 Pl (p<0.01) which progressively increased thereafter. These findings provide the relative percentages of granulocytes and macrophages were increased in conjunction with increase of total number of splenocytes after oral infection with T. gondii in the susceptible murine hosts, and lymphocytes were the major cellular components and the important source of $IFN-{\gamma}$.

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Anti-inflammatory effects of 4,4'-diaminodiphenyl sulfone (dapsone) in lipopolysaccharide-treated spleen cells: selective inhibition of inflammation-related cytokines (지질다당류를 투여한 비장세포에서 4,4'-diaminodiphenyl sulfone (dapsone)의 항염증 효과: 염증 관련 사이토카인의 선택적 억제)

  • Moon, Sun-Young;Joo, Hong-Gu
    • Korean Journal of Veterinary Research
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    • v.55 no.3
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    • pp.199-204
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    • 2015
  • 4,4'-diaminodiphenyl sulfone (dapsone) is a sulfone drug that has antibacterial effects on a variety of bacteria, especially Mycobacterium leprae; thus, it has been used to treat leprosy. Previous studies demonstrated that dapsone inhibits integrin-mediated adherence of neutrophils and production of prostaglandin $E_2$ by polymorphonuclear leukocytes. Hence, dapsone may act in immune cells and regulate cell-mediated inflammation processes. However, its anti-inflammatory effects remain unclear. The present study demonstrated that dapsone modulates the production of inflammation-related cytokines in immune cells. We employed the spleen cells of mice, which are major immune cells, and lipopolysaccharide (LPS) as a causative agent of inflammation for experiments. Dapsone induced a proportional change in splenocyte subsets and the apoptosis of spleen cells. Interestingly, dapsone decreased the production of tumor necrosis factor-alpha and interleukin (IL)-10, but not IL-6, in LPS-treated spleen cells. In other assays, we measured the dapsone-induced production of nitric oxide (NO) and the expression of activation markers of spleen cells. Dapsone decreased NO production in LPS-treated spleen cells. Taken together, our results demonstrate that dapsone has anti-inflammatory effects in immune cells and provide new insight into the potential uses of this agent.

School Uniform Modification and Fashion Accessory Wearing Behavior of High School Students (고등학생의 교복변형과 패션 액세서리 착용행동)

  • Kim, Yong-Sook;Jeon, Chae-Ryeong
    • Korean Journal of Human Ecology
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    • v.16 no.3
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    • pp.587-599
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    • 2007
  • There are many students who modify their uniforms and wear fashion accessories to pursue their individualities. The objectives of this research were to identify school uniform modification and fashion accessory wearing behavior of high school students. The results were as follows; 1. High school students considered that the uniform was desirable because the uniform showed identity best, but many students complained that the uniform was uncomfortable in activity. The most accessory used for the uniform was the cellular phone handle. 2. The uniform modification behavior was highly distinguishable at the coeducational school, the vocational school, and the art or physical school. They modified their uniform to pursuit slim and individuality. The uniform modification was for the beauty aspect more rather than practical aspect of uniform, and was proportional to the degree of the appearance, and in case of pants, the length and width of the pants showed increasing trend compared to the past. They considered accessory wearing as a compensational expression of the most of students who were not actively behaving on the uniform modification.

p53 Protein Expression Area as a Molecular Penumbra of Focal Cerebral Infarction in Rats

  • Hong, Hyun-Jong;Park, Seung-Won;Kim, Young-Baeg;Min, Byung-Kook;Hwang, Sung-Nam;Suk, Jong-Sik
    • Journal of Korean Neurosurgical Society
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    • v.38 no.4
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    • pp.293-298
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    • 2005
  • Objective : The authors investigate the spatial characteristics of apoptotic genes expressed around the focal cerebral infarction, and attempted to explain the penumbra with them. Methods : A delayed focal cerebral infarction was created in twelve adult Sprague-Dawley rats. We performed the immunohistochemical staining for the apoptosis, bcl-2 and p53 proteins and measured the local cerebral blood flow [CBF] at the infarction core area and peri-infarct area pre- and intra-operatively. The peri-infarct area was divided into six sectors by distance from the infarction border. Results : The size [$mm^2$] of apoptosis, bcl-2, and p53 areas were $3.1{\pm}1.2$, $4.7{\pm}2.1$, and $6.8{\pm}2.4$, respectively. Apoptosis, bcl-2 or p53 positive cells were concentrated at the peri-infarct area adjacent to the infarction core. Their numbers reduced peripherally, which was inversely proportional to the local CBF. The p53 area seems to overlap with and larger than the ischemic penumbra. Conclusion : The p53 positive area provides a substitutive method defining the penumbra under the molecular base of knowledge.

Mobile Application based on Image Processing and a Proportion for Food Intake Measuring

  • Kim, Do-Hyeon;Kim, Yoon;Han, Yu-Ri
    • Journal of the Korea Society of Computer and Information
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    • v.22 no.5
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    • pp.57-63
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    • 2017
  • In the paper, we propose a new reliable technique for measuring food intake based on image automatically without user intervention. First, food and bowl image before and after meal is obtained by user. The food and the bowl are divided into each region by the K-means clustering, Otsu algorithm, Morphology, etc. And the volume of food is measured by a proportional expression based on the information of the container such as it's entrance diameter, depth, and bottom diameter. Finally, our method calculates the volume of the consumed food by the difference between before and after meal. The proposed technique has higher accuracy than existing method for measuring food intake automatically. The experiment result shows that the average error rate is up to 7% for three types of containers. Computer simulation results indicate that the proposed algorithm is a convenient and accurate method of measuring the food intake.

A Theoretical study of Oxidation-Reduction Titration Curves (산화${\cdot}$환원 적정곡선의 이론적 고찰)

  • Choe, Gyu-Won
    • Journal of the Korean Chemical Society
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    • v.14 no.4
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    • pp.287-296
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    • 1970
  • The varation of potential and completeness of reaction in an oxidation-reduction titration of Red$_1$ ($a\;Ox_1+N_1e{\leftrightarrow}b\;Red_1)\;by\;Ox_2\;(C\;Ox_2+n_2e{\leftrightarrow}d\;Red_2)$ is analyzed on the basis of general expressions. It is shown that the reaction deficiency as well as the rate of variation of the potential with titration fraction change in proportion to the $[n_2(a-b)-n_1(c-d)]$ th power of the concentration of the reagents. In particular, at the equivalence point, the expression of the potential contains a concentration dependent term that is proportional to ac-bd. Thus, the equivalence-point potential varies with the concentration of the reagents unless ac=bd is satisfied. It is also shown that the sharpness of the potentiometric titration curve is shown to occur either prior to or after the equivalence point depending upon whether $n_1cn_2b$, the deviation being the same order of magnitude as the relative deficiency at the equivalence point.

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