• 한국해양학회지
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• v.22 no.3
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• pp.153-167
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• 1987

The most usually adopted methods from the collection of samples laboratory procedures, to basic analysis of assemblages for the quantitative study of benthic foraminifera are reviewed. Standard methods of treatment of sampleswith emphasis on the effective detection of contamination through routine dip of sieved into Methylene Blue solution after every washing of samples are proposed to minimize differences due to individuals and for comparisons of results in future. Some basic characteristics for the quantitative analyses are also reviewed with appropriate examples. These characteristics are related to toraminiferal abundance, wall structures, condition of test conservation, diversity and related characteristics, faunal similarith between samples, and occurrence of planktonic foraminifera.

• Proceedings of the KAIS Fall Conference
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• 2009.05a
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• pp.842-844
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• 2009

The major group which contains all the organisms that are commonly termed Dinoflagellates is called the division Pyrrophyta or Dinophyta in botanical systems and the order Dinoflagellida or Dinoflagellata in zoological systems. Most dinoflagellates are biflagellated solitary planktonic cells. A taxonomic survey of the dinoflagellate family, Triadiniaceae Dodge was conducted for plankton monitoring network in the coastal waters of Korea. Identification of species in water samples was usually done by using differential interference contrast (DIC), which revealed especially well lighted thecal structures. For the apparent three-dimensional image, scanning electron microscope (SEM) was used. Two species were identified and described, which were Triadinium orientale(Lindemann)Dodge and Triadinium sphaericum(Murray and Whitting)Dodge.

• Proceedings of the KAIS Fall Conference
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• 2009.05a
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• pp.845-847
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• 2009

In thecate dinoflagellates, the thecal plate pattern has been considered to be important criteria in their classifications. Due to this fact the shape of the theca and the arrangement of the theca were studied. In the pictures, the distinctions between the plates in the cells were so vague that I drew a diagram to illustrate the plate pattern. To identify the genus Protoperidinium, the shape of the first apical plate and the second anterior intercalary plate were used. Depending the shape of first apical plate, will be designated as meta(4), meta(5), para(4), para(5) or para(6). The shape of first apical plate is considered an important factor. From this point of view, the genus Protoperidinium as a group of planktonic protist in the coastal environment was classified.

• International Journal of Oral Biology
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• v.35 no.4
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• pp.203-207
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• 2010

A number of bacterial species coexist in oral cavities as a biofilm rather than a planktonic arrangement. By forming an oral biofilm with quorum sensing properties, microorganisms can develop a higher pathogenic potential and stronger resistance to the host immune system and antibiotics. Hence, the inhibition of biofilm formation has become a major research issue for the future prevention and treatment of oral diseases. In this study, we investigated the effects of pentose on biofilm formation and phenotypic changes using wild type oral bacteria obtained from healthy human saliva. D-ribose and D-arabinose were found to inhibit biofilm formation, but have no effects on the growth of each oral bacterium tested. Pentoses may thus be good candidate biofilm inhibitors without growth-inhibition activity and be employed for the future prevention or treatment of oral diseases.

• Journal of the Korean Society of Food Science and Nutrition
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• v.23 no.2
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• pp.293-297
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• 1994

The effect of organic acids on growth and heat resistance of Listeria monocytogenes Scott A were investigated. The growth of L. monocytogenes was inhibited in Tryptic Soy Broth(TSB) with 0.1 or 0.2% of acetic , tartic , propionic , citric and lactic acid at 35$^{\circ}C$, respectively. The growth of l. Monocytogenes did not occur in TSB with 0.2% of acetic acid or propionic acid during 48h of incubation. The heat resistance of L.monocytogenes was affected by kind of organic acid, ph and heating substrate. L.monocytogenes showed more heat resistant in TSB with various organic acids than in 0.1M sodium phosphate with the same organic acids. Heat resistance decreased as pH of heating substrate decreased . Surface-adherent microcolony was more heat resistant than planktonic cell of L. monocytogenes. Propionic and lactic acids more affected on heat resistance of L.monocytogenes than acetic , tartaric and citric acids.

• Journal of Periodontal and Implant Science
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• v.35 no.2
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• pp.271-275
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• 2005

본 연구는 치주낭에 biofilm형태로 부착되어 질환을 유발시키고 항생제 빚 항균제에 저항을 일으키는 세균 독성요소를 규명하기 위해 시행된 기초연구이다. 치주질환의 주 병원균의 하나인 Porphyromonas gingivalis 381 biofilm의 세포외막에 특이하게 발현되는 단백질을 규명하기 위한 기초적인 자료를 얻기 위해 시행하였다. Porphyromonas gingivalis 381을 통상적인 세균 배양용 broth를 사용하여 혐기성 세균 배양기로 24시간 배양한 것을 대조군으로 하고, tissue culture plate를 이용하여 혐기성 배양조건 하에서24시간동안 biofilm을 형성하여 실험군으로 설정하였다. 세균을 수획하여 세포외막을 분리하고 isotonic isoelectric focusing을 시행한 결과 주로 약 20-30 kilodaltons에 해당하는 수종의 세균세포막 단백질이biofilm으로 배양한 세균에서 더 상승적으로 발현됨이 관찰되었고, 상이한 수종의 단백질도 planktonic culture broth로 배양한 세균에서 다 상승적으로 발현됨을 관찰할 수 있었다. 이것은 세균의 배양조건과 환경에 따라 그 외막 단백질이 서로 다르게 발현됨을 입증하는 기초적인 자료로서 향후 단백질의 동정과 성격을 규명하는 근간 실험으로 추진할 계획이다.

• Journal of Microbiology
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• v.43 no.5
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• pp.443-450
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• 2005

The multi-host pathogen, Pseudomonas aeruginosa, possesses an extraordinary versatility which makes it capable of surviving the adverse conditions provided by environmental, host, and, presumably, competing microbial factors in its natural habitats. Here, we investigated the P. aeruginosa-Bacillus subtilis interaction in laboratory conditions and found that some P. aeruginosa strains can outcompete B. subtilis in mixed planktonic cultures. This is accompanied by the loss of B. subtilis viability. The bactericidal activity of P. aeruginosa is measured on B. subtilis plate cultures. The bactericidal activity is attenuated in pqsA, mvfR, lasR, pilB, gacA, dsbA, rpoS, and phnAB mutants. These results suggest that P. aeruginosa utilizes a subset of conserved virulence pathways in order to survive the conditions provided by its bacterial neighbors.

• Animal Systematics, Evolution and Diversity
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• v.35 no.4
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• pp.186-190
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• 2019

DNA barcoding of two marine tintinnids, Eutintinnus rectus and Schmidingerella arcuata, was performed using four samples collected from different sites in the north-eastern coast of South Korea. The loricae morphology was observed by light and scanning electron microscopy. Molecular data were analyzed using five nuclear ribosomal DNA markers(18S, ITS1, 5.8S, ITS2, and 28S genes) and one mitochondrial marker (CO1 gene). The intraspecific pairwise differences of E. rectus and S. arcuata in the CO1 gene were 0.0-0.2% and 0.0-0.6%, respectively, while there were no differences in the 18S rDNA sequences.

• Journal of Microbiology and Biotechnology
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• v.30 no.12
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• pp.1854-1861
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• 2020

Staphylococcus aureus is one of the most common microorganisms and causes foodborne diseases. In particular, biofilm-forming S. aureus is more resistant to antimicrobial agents and sanitizing treatments than planktonic cells. Therefore, this study aimed to investigate the anti-biofilm effects of cell-free supernatant (CFS) of Saccharomyces cerevisiae isolated from cucumber jangajji compared to grapefruit seed extract (GSE). CFS and GSE inhibited and degraded S. aureus biofilms. The adhesion ability, auto-aggregation, and exopolysaccharide production of CFS-treated S. aureus, compared to those of the control, were significantly decreased. Moreover, biofilm-related gene expression was altered upon CFS treatment. Scanning electron microscopy images confirmed that CFS exerted anti-biofilm effects against S. aureus. Therefore, these results suggest that S. cerevisiae CFS has anti-biofilm potential against S. aureus strains.

• Journal of Microbiology and Biotechnology
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• v.31 no.1
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• pp.1-7
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• 2021

Bacterial biofilm is a community of bacteria that are embedded and structured in a self-secreted extracellular matrix. An important clinical-related characteristic of bacterial biofilms is that they are much more resistant to antimicrobial agents than the planktonic cells (up to 1,000 times), which is one of the main causes of antibiotic resistance in clinics. Therefore, infections caused by biofilms are notoriously difficult to eradicate, such as lung infection caused by Pseudomonas aeruginosa in cystic fibrosis patients. Understanding the resistance mechanisms of biofilms will provide direct insights into how we overcome such resistance. In this review, we summarize the characteristics of biofilms and chronic infections associated with bacterial biofilms. We examine the current understanding and research progress on the major mechanisms of antibiotic resistance in biofilms, including quorum sensing. We also discuss the potential strategies that may overcome biofilm-related antibiotic resistance, focusing on targeting biofilm EPSs, blocking quorum sensing signaling, and using recombinant phages.