• 제목/요약/키워드: parental strain

검색결과 171건 처리시간 0.027초

Draft Genome Sequence of the White-Rot Fungus Schizophyllum Commune IUM1114-SS01

  • Kim, Da-Woon;Nam, Junhyeok;Nguyen, Ha Thi Kim;Lee, Jiwon;Choi, Yongjun;Choi, Jaehyuk
    • Mycobiology
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    • 제49권1호
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    • pp.86-88
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    • 2021
  • The monokaryotic strain, Schizophyllum commune strain IUM1114-SS01, was generated from a basidiospore of dikaryotic parental strain IUM1114. It even showed the decolorizing activities for several textile dyes much better than its parental strain. Based on the results of a single-molecule real-time sequencing technology, we present the draft genome of S. commune IUM1114-SS01, comprising 41.1 Mb with GC contents of the genome were 57.44%. Among 13,380 protein-coding genes, 534 genes are carbon hydrate-active enzyme coding genes.

모잘록병(Rhizoctonia solani)의 억제에 있어서 Chromobacterium violaceum이 생산하는 Chitinase의 역할 (Role of Chitinase Produced by Chromobacterium violaceum in the Suppression of Rhizoctonia Damping-off)

  • 박서기;이효연;김기청
    • 한국식물병리학회지
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    • 제11권4호
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    • pp.304-311
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    • 1995
  • To determine whether chitinolytic enzymes from Chromobacterium violaceum C-61 play an important role in the suppression of Rhizoctonia damping-off, Tn5 insertion mutants deficient in chitinolytic activity (Chi a- mutants) were selected and their chitinolytic and disease suppression were compared with those of the parental strain. Four Chi a- mutants selected from about 2,000 transconjugants did not inhibit mycelial growth of Rhizoctonia solani on nutrient agar-potato dextrose agar (BA-PDA) and their abilities to suppress Rhizoctonia damping-off were much lower than the parental strain. However, population density in the eggplant rhizosphere did not differ significantly between the parental strain and four Chi a- mutants. The crude enzyme of the parental strain inhibited growth of R. solani on NA-PDA and its chitinase activity was much higher than that of Chi a- mutants. But the N,N' -diacetylchitobiase activity between these isolates were not significantly different. The chitinase of Chi a- mutants was defective in 2 isoforms of 52- and 37-kDa among four isoforms of 54-, 52-, 50- and 37-kDa. A Tn5 element was inserted into one site of 10 kb EcoRI fragment of chromosomal DNA in three Chi- mutants, C61-C1, -C2, and -C3. In C61-C4 mutant, a Tn5 element was inserted into two sites of 10 kb and 4.4 kb EcoRI fragments. These results suggest that the chitinase of C. violaceum C-61 play an important role in the suppression of Rhizoctonia damping-off of cucumber and eggplant.

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설치류에서 알파 Herpes 바이러스의 신경친화성과 침습 (Neurotropism and Invasiveness of $\alpha-Herpes$ Virus in the Rodent)

  • 김진상;이성준
    • The Journal of Korean Physical Therapy
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    • 제9권1호
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    • pp.59-70
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    • 1997
  • The ability of neurotropic alpha herpesviruses to replicate within synaptically linked neurons has made these pathogens valuable tools for transneuronal analysis. Recent studies suggest that unique gene products expressed by genetically engineered strains of virus may permit the use of multiple strains in complex tracing paradigms. In the present study we have examined the invasiveness of two genetically engineered strains of the swine pathogen known as pseudorabies virus(PRV). The two strains were isogenic with the attenuated Bartha strain of PRV; in one strain a lacZ reporter gene was inserted into the gC locus (PRV-BaBlu; $4.75\times10^8pfu/ml$) contrained a PRV envelope glycoprotein gene that was absent in PRV-BaBlu. Simultaneous or temporally separated sequential injection of $4\mu\ell$ of each strain into the ventral wall of the stomach produced a predictale course of retrograde synaptic infection. The results were as follows: 1. PRV-BaBlu and PRV-D infected the dorsal motor nucleus of vagus nerve(DMV) and paraventricular nucleus(PVN). 2. Invasion and replication of PRV-D occured at a faster rate than the parental strain or PRV-BaBlu. 3. PRV-D was much more virulent than PRV-BaBlu or the parental strain. 4. Co-injection of PRV-D and PRV-BaBlu produced an infection that was more virulent than that produced by the parental strain (PRV-Bartha), 5. Neurons in DMV were permissive to co-infection with PRV-D and PRV-BaBlu when they were injected simultaneously into the same site. 6. Replication of PRV-BaBlu was compromised by prior infection of the same circuit with PRV-D. 7. Prior infection of neurons with PRV-D maked them resistant to infection with PRV-BaBlu.

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Aspergillus niger의 변이주(變異株)에 의(依)한 Endo-polygalacturonase의 생산(生産) (Production of Endo-Polygalacturonase of a Mutant of Aspergillus niger)

  • 박윤중;손천배
    • 농업과학연구
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    • 제12권2호
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    • pp.324-332
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    • 1985
  • 각종(各種) 시료(試料)로부터 1,573주(株)의 균주(菌株)를 분리(分離)하고 그 중에서 endo-polygalacturonase (Endo-PG) 활성이 강한 Aspergillus niger B-15를 선발하였다. 이어서 선정균주(選定菌株)에 자외선을 연차적(連次的)으로 조사(照射)하여 변이주(變異株) U-46을 얻었으며 친주(親株)와 변이주(變異株)의 균학적성질(菌學的性質)을 조사(調査)하고 변이주(變異株)의 효소생산조건(酵素生産條件)과 반응조건(反應條件)을 검토(檢討)하여 아래와 같은 결과를 얻었다. 1. 변이주(變異株) U-46은 친주(親株)보다 분생자두(分生子頭)의 크기가 작아지고 분생자병(分生子柄)의 길이가 짧아졌다. 2. 밀기울배지에서의 배양(培養)에 있어서 Endo-PG생산(生産)을 위한 최적조건(最適條件)은 친주(親株) B-15의 경우 밀기울에 대한 첨수량(添水量) 40%, 배양온도(培養溫度) $30{\sim}35^{\circ}C$였으나 변이주(變異株) U-46의 경우는 밀기울에 대한 첨수량(添水量) 60~70%, 배양온도(培養溫度) $35^{\circ}C$였다. 배양일수는 어느 것이나 2~3일간이 적당하였다. 3. 친주(親株)와 변이주(變異株)를 각각의 최적조건(最適條件)에서 배양(培養)할 경우 친주(親株) B-15의 Endo-PG에 비하여 변이주 U-46의 효소활성은 약 20배 높았다. 4. 밀기울배지(밀기울에 대한 첨수량(添水量) 60%)에 $35^{\circ}C$, 3일간 배양할 경우 변이주 U-46 은 친주(親株)에 비하여 Endo-PG 활성이 약 47배(倍)로, Exo-PG 활성은 약 18배로 증가되었으며 cellulase, ${\alpha}$-amylase 및 glucoamylase 활성도 증가되었다. 5. 밀기울에 $(NH_4)_2SO_4$을 1.2~1.5% 첨가(添加)한 배지에서 변이주(變異株) U-46의 Endo-PG 활성(活性)은 약 20% 증가되었다. 6. 변이주(變異株) U-46의 조효소액(粗酵素液)의 Endo-PG 반응(反應) 최적조건은 pH 4.0~4.5, $50^{\circ}C$이었다.

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원형질체 재생을 통한 느티만가닥버섯 단핵균주 선발 (Selection of parental monokaryons from Korean Hypsizigus marmoreus by protoplast regeneration)

  • 오연이;공원식;장갑열;신평균;김은선;오민지;최인걸
    • 한국버섯학회지
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    • 제13권3호
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    • pp.270-273
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    • 2015
  • 만가닥버섯은 일본에서 가장 중요한 식용버섯이다. 그러나 배양기간이 약 85~120일로 길어서 국내에서 다른 버섯에 비해 배양이 어려운 실정이다. 이 연구에서는 만가닥버섯 표준유전체 염기서열분석을 위하여 '해미'품종으로부터 원형질체를 분리하고 재생하여 모균주의 단핵균주를 얻었다. MCM배지 및 MYG배지에서 배양되고, 균질화된 균사체는 원형질체를 얻기 위하여 Novozyme효소를 처리하였다. 원형질체 분리의 가장 높은 효율은 MCM 배지에서 이차배양이 3일된 균사체에 2.5시간 효소처리 조건이었다. 분리된 원형질체는 재생배지에서 2주 동안 배양되어 재생되었다. 재생체는 클램프로 단핵균주를 확인하고 '해미'의 모균주의 단핵균주와 클램프 유무로 친화성을 확인하였다. 분리된 모균주의 단핵균주는 짧은 배양기간을 가진 품종을 개발하기 위한 유전적 기초자료를 완성하는 표준유전체 염기분석 재료로서 사용될 예정이다.

Enhancing Cellulase Production in Thermophilic Fungus Myceliophthora thermophila ATCC42464 by RNA Interference of cre1 Gene Expression

  • Yang, Fan;Gong, Yanfen;Liu, Gang;Zhao, Shengming;Wang, Juan
    • Journal of Microbiology and Biotechnology
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    • 제25권7호
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    • pp.1101-1107
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    • 2015
  • The role of CRE1 in a thermophilic fungus, Myceliophthora thermophila ATCC42464, was studied using RNA interference. In the cre1-silenced strain C88, the filter paper hydrolyzing activity and β-1,4-endoglucanase activity were 3.76-, and 1.31-fold higher, respectively, than those in the parental strain when the strains were cultured in inducing medium for 6 days. The activities of β-1,4-exoglucanase and cellobiase were 2.64-, and 5.59-fold higher, respectively, than those in the parental strain when the strains were cultured for 5 days. Quantitative reverse-transcription polymerase chain reaction showed that the gene expression of egl3, cbh1, and cbh2 was significantly increased in transformant C88 compared with the wild-type strain. Therefore, our findings suggest the feasibility of improving cellulase production by modifying the regulator expression, and an attractive approach to increasing the total cellulase productivity in thermophilic fungi.

Construction of a Genetic Linkage Map of Shiitake Mushroom Lentinula Edodes Strain L-54

  • Hoi-Shan, Kwan;Hai-Lou, Xu
    • BMB Reports
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    • 제35권5호
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    • pp.465-471
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    • 2002
  • From fruiting bodies of L. edodes strain L-54, single-spore isolates (SSIs) were collected. Two parental types of L-54 were regenerated via monokaryotization. By means of random-amplified polymorphic DNA (RAPD), DNA samples from L-54, its two parental types, and 32 SSIs were amplified with arbitrary primers. Dedikaryotization was demonstrated, and 91 RAPD-based molecular markers were generated. RAPD markers that were segregated at a 1:1 ratio were used to construct a linkage map of L. edodes. This RAPD-linkage map greatly enhanced the mapping of other inheritable and stable markers [such as those that are linked to a phenotype (the mating type), a known gene (priA) and a sequenced DNA fragment (MAT)] with the aid of mating tests, bulked-segregant analysis, and PCR-single-strand conformational polymorphism. These markers comprised a genetic map of L. edodes with 14 linkage groups and a total length of 622.4 cM.

$\alpha$-Amylase 생산성이 높은 Bacillus sp. HG4의 분리 및 효소 특성 (Isolation of $\alpha$-Amylase Hyperproducing Strain HG4 from Bacillus sp. and Some Properties of the Enzyme)

  • 김무성;오평수
    • 한국미생물·생명공학회지
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    • 제19권5호
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    • pp.464-469
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    • 1991
  • $\alpha$-Amylase를 생산하는 Bacillus sp. 2B를 토양에서 분리하였으며 이 균주에 반복적으로 돌연변이원인 NTG를 처리하여 효소생산성이 증대된 변이주를 유도하였다. $\alpha$-Amylase 고 생산성 균주의 효율적인 획득방법으로 glucose에 의한 $\alpha$-amylase의 생성억제를 받지않는 변이주를 분리한 결과, 효소생산성이 약 30배 향상된 변이주 Bacillus sp. HG4를 획득하였다. 이 균주는 lactose를 탄소원으로 하여 최대 효소생성능을 나타내었으며 빠른 균체성장 및 최대 효소생성시기에 균체 lysis가 적은 점 등 산업적으로 사용하기에 유리한 특성을 가진 것으로 판단된다.

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Characterization of Aspergillus niger Mutants Deficient of a Protease

  • Chung, Hea-Jong;Park, Seung-Moon;Kim, Dae-Hyuk
    • Mycobiology
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    • 제30권3호
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    • pp.160-165
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    • 2002
  • Aspergillus niger has been used as a host to express many heterologous proteins. It has been known that the presence of an- abundant protease is a limiting factor to express a heterologous protein. The protease deficient mutant of A. niger was obtained using UV-irradiation. A total of $1{\times}10^5$ spores were irradiated with $10{\sim}20%$ survival dose of UV, 600 $J/m^2$ at 280 nm, and the resulting spores were screened on the casein-gelatin plates. Ten putative protease deficient mutants showing the reduced halo area around colonies were further analyzed to differentiate the protease deficient mutant from other mutant types. Among ten putative mutants, seven mutants showed significant growth defect on nutrient rich medium and two mutants appeared to be the secretory mutants, which resulted in the impaired secretion of extracellular proteins including proteases. A mutant $pro^--20$ showed reduced halo zone without any notable changes in growth rate. In addition, the starchdegrading and glucose oxidase activities in the culture filtrate of $pro^--20$ mutant showed the similar range as that of the parental strain, which suggested that the $pro^--20$ mutant ought to be the protease deficient mutant rather than a secretory mutant. The reduced proteolytic activity of the $pro^--20$ was demonstrated using SDS-fibrin zymography gel. The reduced extracellular proteolysis was quantified by casein degradation assay and, comparing with the parental strain, less than 30% residual extracellular protease activity was detected in the culture filtrate of the $pro^--20$ mutant. The bio-activity of an exogenously supplemented hGM-CSF(human Granulocyte-Macrophage Colony Stimulating Factor) in the culture filtrate of $pro^--20$ mutant was detected until eight times more diluted preparations than that of the parental strain.

Overexpression of Mutant Galactose Permease (ScGal2_N376F) Effective for Utilization of Glucose/Xylose or Glucose/Galactose Mixture by Engineered Kluyveromyces marxianus

  • Kwon, Deok-Ho;Kim, Saet-Byeol;Park, Jae-Bum;Ha, Suk-Jin
    • Journal of Microbiology and Biotechnology
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    • 제30권12호
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    • pp.1944-1949
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    • 2020
  • Mutant sugar transporter ScGAL2-N376F was overexpressed in Kluyveromyces marxianus for efficient utilization of xylose, which is one of the main components of cellulosic biomass. K. marxianus ScGal2_N376F, the ScGAL2-N376F-overexpressing strain, exhibited 47.04 g/l of xylose consumption and 26.55 g/l of xylitol production, as compared to the parental strain (24.68 g/l and 7.03 g/l, respectively) when xylose was used as the sole carbon source. When a mixture of glucose and xylose was used as the carbon source, xylose consumption and xylitol production rates were improved by 195% and 360%, respectively, by K. marxianus ScGal2_N376F. Moreover, the glucose consumption rate was improved by 27% as compared to that in the parental strain. Overexpression of both wild-type ScGAL2 and mutant ScGAL2-N376F showed 48% and 52% enhanced sugar consumption and ethanol production rates, respectively, when a mixture of glucose and galactose was used as the carbon source, which is the main component of marine biomass. As shown in this study, ScGAL2-N376F overexpression can be applied for the efficient production of biofuels or biochemicals from cellulosic or marine biomass.