• Title/Summary/Keyword: outgroup

Search Result 72, Processing Time 0.023 seconds

Molecular Phylogeny of Veneridae (Bivalvia: Heteroconchia) on the Basis of Partial Sequences of Mitochondrial Cytochrome Oxidase 1 (백합 과 패류의 mtCOI 일부 염기서열을 이용한 계통분류)

  • Kim, Jae-Jin;Kim, Sei-Chang;Hong, Hyun-Chul
    • The Korean Journal of Malacology
    • /
    • v.20 no.2
    • /
    • pp.171-181
    • /
    • 2004
  • Partial sequences of the mitochondrial cytochrome oxidase subunit Ⅰ(mtCOI) gene of veneroid clams were obtained to eluciadate molecular phylogeny. A total of nine veneroids and one corbiculid were collected from southern and western sea of Korea. The mtCOI sequences of the clams obtained from the present study and three veneroids sequences from GenBank were analyzed by maximum parsimony and neighbor-joining methods. The subfamilies Samarangiinae, Dorsiniinae, Cyclinae, Meretricinae and Chioninae were monophyletic, but Pitarinae was paraphyletic. One transitions and two transversions among two samples of Ruditapes philippinarum and a R. variegata were observed.

  • PDF

Relationship of Lycoris (Amaryllidaceae) Based on RAPD Markers (RAPD markers에 의한 상사화속 식물의 유연관계)

  • Tae, kyoung-Hwan;Kim, Yong Hyun;Shin, Young-Hwa;Kang, Shin-Ho;Kim, Joo-Hwan;Ko, Sung-Chul
    • Korean Journal of Plant Taxonomy
    • /
    • v.38 no.1
    • /
    • pp.17-29
    • /
    • 2008
  • Phylogenetic relationships were examined for 17 taxa of Lycoris by RAPD analysis. The length of the amplified DNA fragments ranged from 300 bp to 1,700 bp. 57 scorable RAPD markers were observed from PCR reactions with five random oligoprimers. The analysis by UPGMA sepatated the examined taxa of Lycoris into were clusters. First group was comprised of ten taxa of L. chinensis var. sinuolata, L. sanguinea var. koreana, L. uydoensis, L. flavescens, L. radiata var. pumila, L. radiata, L. squamigera, L. chejuensis, L. aurea and L. guangxiensis, second group of L. haywardii, L. sprengeri, L. rosea, L. straminea and L. houdyshii, third group of outgroup of Narcissus tazetta var. chinensis and Crinum asiaticum var. japonicum. From the viewpoint of cytological characters such as polyploidy and karyotype, the RAPD analysis was very useful to show the relationship among the intraspecific taxa of Lycoris.

Molecular Phylogenetic Studies of Korean Calystegia R.Br. Based on ITS and psbA-trnH Sequences (ITS와 psbA-trnH 염기서열에 의한 한국산 메꽃속(Calystegia R.Br.)의 분류학적 연구)

  • Kim, SangJun;Park, SeonJoo
    • Korean Journal of Plant Taxonomy
    • /
    • v.41 no.4
    • /
    • pp.338-344
    • /
    • 2011
  • Molecular phylogenetic studies were conducted to evaluate evolutionary trends, relationships and species identities among four species, one variety and one outgroup of the Korean Genus Calystegia. The important characteristics of Calystegia are the shape of the lamina, the length ofthe corolla and the presence of hair. However, many variations were observed as regards the characteristics of the leaf, making true identification difficult. In molecular phylogenetic studies, C. soldanella formed one clade, and it was located mostly in the base. C. hederacea and C. sepium did not form an independent clade in their ITS regions and psbA-trnH regions, and this investigation could not confirm a relationship. Therefore, a relationship between these two species is not sufficiently supported by these markers (ITS and psbA-trnH). Consequently, this research should be achieved through many samples and markers. C. sepium var. japonica and C. dahurica are closely related.

Systematic Relationships among Species of the Genus Dendronephthya (Alcyonacea: Octocorallia; Anthozoa) Based on RAPD Analysis

  • Song, Jun-Im;Lee, Young-Ja
    • Animal cells and systems
    • /
    • v.4 no.1
    • /
    • pp.1-7
    • /
    • 2000
  • The genus Dendronephthya, generally known as soft corals, is reported as an abundant and variable taxon. They mostly distribute in warmer waters of the Undo-Pacific Ocean region including Korea. In spite of their abundance and ecological importance as habitats of marine organisms, there are difficulties in the study of their identification and systematics because they have morphological variabilities and limited taxonomec characters. To resolve the problems, we attempted to elucidate the genetic relationships in the genus Dendronephthya by using random amplified polymorphic DNA (RAPD) analysis. This study was based on eight dendronephthian species and one Alcyoniidae species, Alcyonium gracillimum, as an outgroup. The results from all analysis suggest that they could be classified into four groups by the growth form and the anthocodial grades as follows: the first one,D. putteri and D. suensoni with the divaricate form and VI grade; the second one,D. sp.1 and D. sp.2 with the divaricate form and III or IV grade; the third one, D. gigantea and D. aurea being closer than D. spinifera with the glomerate form and III grade; the last one, D. castanea related to D. gigantea rather than D. putteri with the umbellate form and IV grade. Moreover, the divaricate form was separated from the group of the glomerate and umbellate form. At the intraspecies level, the types of the D. castanea, D. gigantea and D. spinifera were separated depending on the feature of spicules in the polyp head, and the coloration could not influence genetic variation. From this study, we can confirm that their morphological characters are compatible with the genetic variation, also RAPD analysis is a very useful method for resolving the systematic relationships of den-deonephthians.

  • PDF

Development of Variation Marker of Myzus persicae by Altitude (고도에 따른 지역별 복숭아혹진딧물 집단 변이 마커 개발)

  • Kim, Ju-Il;Kwon, Min
    • Korean journal of applied entomology
    • /
    • v.50 no.4
    • /
    • pp.325-333
    • /
    • 2011
  • This study focused on the green peach aphid, Myzus persicae, as an indicator pest in Chinese cabbage cultivation to develop a genetic marker. We hypothesized that M. persicae gene flow is related to climate change. Genetic variation was analyzed using five local populations collected at different altitudes (157 m, 296 m, 560 m, 756 m and 932 m above sea level) in Hoengseong, Pyeongchang, and Gangneung areas, plus a laboratory strain used as an outgroup. There were no differences in ecological characteristics among strains. Esterase isozyme pattern and inter-simple sequence repeat (ISSR) PCR results showed significantly different bands between laboratory and wild, local populations. However, there was no difference among local populations. Partial fragments of ribosomal RNA (rRNA) and mitochondrial cytochrome oxidase I (mtCO I) were amplified and their nucleotide sequence was analyzed. Single nucleotide polymorphisms (SNPs) were detected in internal transcribed spacer-2 (ITS-2) and mtCO I regions among the five local populations. These SNPs can be use to discriminate different populations of M. persicae to monitor gene flow.

Numerical taxonomy of tribe Forsythieae (Oleaceae) in Korea (한국산 개나리족(Tribe Forsythieae; Oleaceae)의 수리분류학적 연구)

  • Kim, Dong-Kap;Kim, Joo-Hwan
    • Korean Journal of Plant Taxonomy
    • /
    • v.34 no.3
    • /
    • pp.189-203
    • /
    • 2004
  • Numerical analysis based on 33 morphological characters from 25 populations of 8 species of tribe Forsythieae in Korea was conducted to investigate the taxonomic delimitation and discuss the systematic relationships. In this study, Fontanesia phyllyreoides Labill was adopted as comparing outgroup to discuss the taxonomic status of Abeliophyllum distichum and elucidate the taxonomic relationships between tribe Forsythieae and tribe Fontanesiae. Based on the results of PCA, the sum of contributions for the total variance of three major principal components was 79.6% (PC1 54.2%, PC2 15.4% and PC3 10.0%, repectively). Two dimensional plotting from PCA results recognized three distinct generic clusters. Among the populations of Forsythia, two distinct groups were clustered as I. koreana-saxatilis-viridissima and II. ovata-nakaii. However, 15 populations of Abeliophyllum distichum were arranged randomly without any tendency, and the infraspecies of Abeliophyllum distichum could be recognized as individual variations. Fontanesia phyllyreoides Labill was clustered independently and intertribal limitation was clearly distinguished.

Systematics of Korean Thalictrum L. based on a morphological cladistic analysis (형태학적 분계분석에 의한 한국산 꿩의다리속(Thalictrum L.) 식물의 계통학적 연구)

  • Park, Seongjun;Park, Seon-Joo
    • Korean Journal of Plant Taxonomy
    • /
    • v.39 no.2
    • /
    • pp.89-99
    • /
    • 2009
  • We used Maximum parsimony and Neighbor-joining to investigate phylogenetic relationship of the genus Thalictrum in Korea with 39 morphological characters. The plant materials were used for ingroup 21 taxa and outgroup 1 taxon including a Korean endemic plant. This study confirmed that Sect. Thalictrum and Sect. Camptonotum formed monophyletic group by 100% and 83% bootstrap values respectively, and Sect. Camptonotum appeared to be Sect. Thalictrum's sister group. Sect. Erythrandra and Sect. Physocarpum formed paraphyletic groups. Sect. Physocarpum except T. osmorhizoides appeared to be polytomy. Sect. Tripterium and Sect. Omalophysa formed an independent clade. The shape of stamen is the important character representing the phylogenetic pattern of the genus Thalictrum; the bat and filiform types might be derived from clavate type. The pollination patterns (entomophily, anemophily), and presence of calyx at flowering time may also be related to the evolution of the Thalictrum flowers.

How Does Narcissist Cope with Close Others' Mimicry Buying of Fashion Products? -Differentiation Strategies according to Social Status of Mimickers- (나르시시스트는 가까운 타인의 패션제품 모방 구매에 어떻게 대처하는가? -모방자의 사회적 지위에 따른 차별화 전략-)

  • Kim, Eung Tae;Jang, Ju Yeun;Park, Jisoo
    • Journal of the Korean Society of Clothing and Textiles
    • /
    • v.42 no.6
    • /
    • pp.897-908
    • /
    • 2018
  • This study investigates the effect of mimicry buying on differentiation behavior in the context of fashion product consumption. Merging insights from social identity theory, optimal distinctiveness theory and previous research on narcissism, this article presents ingroup-outgroup categorization, narcissistic tendency and social status to serve as boundary conditions of this effect. Experiment 1 supports the hypothesis that more differentiation behavior against mimicry buying is reinforced when the mimicker is an in-group member compared to an out-group member. Based on this result, we conducted Experiment 2 to understand the effect of narcissistic tendency and mimicker's social status on differentiation behavior in the in-group context. The results show that the effect of narcissistic tendency on differentiation behavior is mediated by a perceived distinctiveness threat when the mimicker is an in-group member. In addition, this mediating effect is moderated by the mimicker's social status. Narcissistic tendencies have a direct negative effect on differentiation behavior when the mimicker is an in-group member with a high social status. However, high narcissistic tendency induces a more distinctiveness threat when the mimicker is an in-group member with a low social status. This then results in a greater differentiation behavior. Implications for marketers and suggestions for future research are also discussed.

Effects of Selective Exposure to YouTube Political Videos on Attitude Polarization: Verifying Mediating Effects of Political Identification (유튜브 정치동영상의 선택적 노출과 정치적 태도극화: 정치성향별 내집단 의식의 매개효과 검증)

  • Ham, Minjeong;Lee, Sang Woo
    • The Journal of the Korea Contents Association
    • /
    • v.21 no.5
    • /
    • pp.157-169
    • /
    • 2021
  • YouTube has rapidly grown as a news media outlet. As political content without fact-checking is actively provided and YouTube algorithms are used for content recommendations, users are selectively exposed to certain political ideologies, which could escalate conflicts among political groups. In particular, the stronger the identification of in-group, the greater the antipathy toward outgroup, and the more exposed the content to the parties that support or oppose it, the stronger the identification or the antipathy can be. This study investigated the relationship between selective exposure and political attitude polarization in the context of political video on YouTube. Based on social identity theory, this study also found that political identification mediates the relationship between selective exposure and political attitude polarization.

Relationship between College Students' Multicultural Contact Experiences and Multicultural Competency: Mediating Effects of Perspective Taking and Prejudice (대학생의 다문화 접촉경험과 다문화 역량의 관계: 조망수용과 편견의 매개효과)

  • Gahee Choi
    • Korean Journal of Culture and Social Issue
    • /
    • v.29 no.3
    • /
    • pp.341-359
    • /
    • 2023
  • This study investigated effects of college students' multicultural contacts on multicultural competency. This study also examined mediating effects of perspective taking and prejudice. Multicultural contacts were divided into quality of contacts and quantity of contacts. Effects of quality and quantity of contacts on multicultural competency through perspective taking and prejudice were separately analyzed using two models. For the purpose, 642 Korean college students completed the questionnaires including multicultural contacts, multicultural competency, perspective taking, prejudice and demographic information. The results indicate that both quality and quantity of contacts are associated with multicultural competency, but quality of contacts are more strongly associated with multicultural competency. Also, perspective taking and prejudice mediate the relationship between quality of contacts and multicultural competency while mediators did not mediate the relationship between quantity of contacts and multicultural competency. The results indicate that intimate and positive contacts with outgroup members help enhance college students' multicultural competency through increased perspective taking and prejudice reduction. Future multicultural education for undergraduate students should focus on increasing the quality of multicultural contacts and help them with perspective taking, and reducing prejudice.