• Title/Summary/Keyword: not-distributed species in Korea

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Complete chloroplast genome sequences of a major invasive species, Cenchrus longispinus, in Daecheong Island

  • Hyun, Jongyoung;Jung, Joonhyung;NamGung, Ju;Do, Hoang Dang Khoa;Kim, Joo-Hwan
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2018.10a
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    • pp.64-64
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    • 2018
  • The genus Cenchrus (Poaceae), containing ca. 97 species, is distributed throughout Australia, Africa and Indian sub-continent and which was introduced to the United States and Mexico for use in improved pasture. In Korea, especially Daecheong Island, it is one of the most hazardous invasive plant, which causes serious environmental threats, biodiversity damages and physically negative impact on humans and animals. It can cause serious damage to farms, fields and white sand beaches. However, the chloroplast (cp) genome sequences and information of Cenchrus longispinus have been not addressed, so we provide the complete cp genome of Cenchrus longispinus using next-generation sequencing technology. The size of cp genomes of this Daecheong Island species (Cenchrus longispinus) is 137,144 bp, and it shows a typical quadripartite structure. Consisting of the large single copy (LSC; 80,223 bp), small single copy (SSC; 12,449 bp), separated by a pair of inverted repeats (IRs; 22,236 bp). This cp genome contains 75 unique genes, 4 rRNA coding genes, 33 tRNA coding genes and 21 duplicated in the IR regions, with the gene content and organization are similar to other Poaceae cp genomes. Our comparative analysis identified four cpDNA regions (rpl16, rbcL, ndhH and ndhF) from three Cenchrus species, two Setaria species and one Pennisetum species which may be useful for molecular identification.

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Serologic Study on Hantavirus Infection of Wild Rodents Captured in Kyebang Mountain, Kangwon-do, 1995 (1995년 계방산에서 채집한 들쥐의 한타바이러스 감염에 대한 혈청학적 연구)

  • Baek, Luck-Ju;Kang, Ju-Il;Song, Ki-Joon;Song, Jin-Won;Yang, Bung-Gug;Lee, Yong-Ju
    • The Journal of Korean Society of Virology
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    • v.27 no.2
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    • pp.177-183
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    • 1997
  • Multiple species of muridae and arvicolidae rodents serve as the natural reserviors of hantaviruses. Hantaviruses are distributed in rodent populations world-widely even in geographical areas where hemorrhagic fever with renal syndrome (HFRS) has not been reported. Serologic diagnosis of infection, using hantaviral antigen, indicates that hantaviruses are widey distributed in wild rodents. This study was designed to intended the hantavirus infection among wild rodents captured in Kyebang mountain, Kangwon-do in Korea. A total of 216 wild rodents in 3 species were trapped in July and September in 1995. Serological evidence for hantaviruses infection were tested against five hantavirus antigens by indirect immunofluorescent antibody technique (IFA). Among 100 Eothenomys regulus, 78 Apodemus peninsulae and 38 Apodemus agrarius; 12 C. regulus, 15 A. peninsulae and 6 A. agrarius were IF antibody positive against hantaviruses. This data suggest that Eothenomys regulus and Apodemus peninsulae would be a natural reservoir of hantaviruses.

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Classification of calcicoles and calcifuges on the basis of the ratio of soluble to insoluble ca2+ and mg2+ in the leaves (可溶性, 不溶性 Ca2+ 과 MG2+ 比에 의한 好石灰 및 嫌石灰植物의 分類)

  • Kim, Joon-Ho;Kwak, Young-Se;Mun, Hyung-Tae
    • The Korean Journal of Ecology
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    • v.15 no.3
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    • pp.311-328
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    • 1992
  • In other to classify calcicoles and calcifuges and calcifuges within plant communities occurring on limestone and granite soils in chungbuk province, korea, soil propertile, constancy for species by prsence or absence, and ratios of soluble to insoluble $Ca^{2+}$ and $Mg^{2+}$ were investigated. In the limestone soils ph values and $Ca^{2+}$ and $Mg^{2+}$ content, ranging 7.26 ~7.48, 5.32~7.37 mg $Ca^{2+}/g$ and 0.42~0.62 mg $Mg^{2+}/g$, respectively, were higher than those in the granite soil with ph 5.76, 1.03mg $Ca^{2+}/g$ and 0.24mg $Mg^{2+}/g$. species with high constancy in the 5 communities were classified into three groups; species group a(29~36% of total number of species) was composed of species occuring on the granite soil; group c(16~24%) is commonly distributed throughout both soils. Ratios of soluble to insoluble $Ca^{2+}$ and $Mg^{2+}$ ranged from 0.1 to 81.3 in the group a, 0.2 to 0.8 in the group b and 0.2 to 8.7 in the group c. species within each group can be divided into two groups based on the values of the ratio, below or above 1.0. consequently, each of the group a and c was classified again into two groups; the group a1 and c1 with the ratio of above 1.0 and the group a2 and c2 withbelow 1.0 but the ratio could not further subdivide the group b. from these results it was proposed that plants of the group a1 were termed as obligate calcicoles, the group b as obligate calcifuges, the group c1 as facultative calcicoles, the group c2 as facultative calcifuges and the group a2 as avoiding calcifuges.

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Grid Cell Analysis using Species Diversity Index of Birds in the Northern Area of Yeongjong Island, Incheon, Korea (영종도 북부지역의 조류 종다양도를 이용한 격자별 공간 분석)

  • Kang, Jong-Hyun;Cho, Hang-Soo;Lee, Yun-Kyoung;Kim, Dong-Won;Kim, Chang-Hoe;Kim, Myungjin;Bae, Yang-Seop
    • Journal of Environmental Impact Assessment
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    • v.21 no.5
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    • pp.649-664
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    • 2012
  • The grid cell analysis is used to select good sites as habitats at the region. The northern area of Yeongjong Island, Incheon has been disturbing by habitat loss due to human activities such as residential development, deforestation. In order to determine significant places as bird habitats and to select conservation areas at this island, the study area was divided into 70 grid cells($500{\times}500m$ each grid) and then each grid was ranked by spatial analysis using the species diversity index. Fieldwork was carried out in Spring and Autumn of 2010. To examine grid cells which were ranked high in both seasons in common, we used the average ranking value, combined data from two seasons. This area consists of mainly agricultural areas and forests(more than 68%) among eight habitat types: the agricultural land, forest, coast, lake, meadow, stream, city and other things. A total of 110 species was recorded: 4,183 birds of 102 species in Spring and 3,326 birds of 58 species in Autumn. In other words, the number of individuals and species was higher in Spring than in Autumn. Species diversity index presented the highest value at M8 grid cell in Spring(3.380) and at A4 gird cell in Autumn(2.736). In 18 of 22 grid cells where the average ranking value was higher than 3, the forest was distributed and in 4 grid cells, the coast and wetland were widely distributed, in which theses were located apart from human-associated disturbances such as construction works for a leisure complex. Our results present a new estimate method not only to minimize loss of bird habitats but also to conserve important habitats when the large-scale development takes place at particular region.

Review on the succession process of Pinus densiflora forests in South Korea: progressive and disturbance-driven succession

  • Choung, Yeonsook;Lee, Jongsung;Cho, Soyeon;Noh, Jaesang
    • Journal of Ecology and Environment
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    • v.44 no.3
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    • pp.126-142
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    • 2020
  • Background: Most of the Pinus densiflora forests, occupying the largest area, have been restored in South Korea since the 1970s. As young pioneer forests, the succession process is under way. Since the forests are distributed nationwide and are vulnerable to disturbances, the process may differ depending on the geography and/or site conditions. Therefore, we reviewed the direction, the seral communities, and the late-successional species of progressive and disturbance-driven succession nationwide in the cool-temperate zone through meta-analysis and empirical observations. Main text: As a result of a meta-analysis of the direct succession and vertical structure, we found that the P. densiflora forest is in a directionally progressive succession, changing to the broadleaved forest after forming a mixed forest with its overwhelming successor, Quercus species (particularly Q. mongolica and Q. serrata). In dry stands in a relative sense, the Quercus species was favored occupying over 80% of the abundance of the succeeding species. Therefore, in dry stands, it is presumed that Quercus-dominated stage would last for a long time due to the current dominance and long life span, and eventually, it settles as Quercus-broadleaved forest with a site change. Contrary to this, it is presumed that in mesic stands where Quercus species do not occur or have low abundance, the late-successional broadleaved species settle early to form a co-dominant forest with multiple species. Due to geographical limits, the species composition of the two late-successional forests is different. Disturbances such as insect pests and fire retrogressed vulnerable P. densiflora forest for a while. However, it was mostly restored to the Quercus forest and is expected to be incorporated in the pathway of the dry stand. Conclusions: We revealed the succession process of P. densiflora forests according to geography and moisture and found that stand moisture had a decisive effect on the species and abundance of the successor. Although the P. densiflora forest is undergoing structural changes, the forest is still young; so within a few decades, physiognomy is not likely to change. Therefore, the decrease in the forest area may be due to other causes such as disturbances and forest conversion rather than due to succession.

Species identification and microscopic structure of ancient wood excavated from the remains( I ) -Species of coffin woods excavated from ancient tombs- (출토고목재의 수종과 조직구조에 관한 연구( I ) -출토목관재의 수종-)

  • PARK, S. J.;KANG, A. K.;KIM, Y. J.
    • Journal of Conservation Science
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    • v.2 no.2 s.2
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    • pp.3-14
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    • 1993
  • This study was carried out to identify the species of wooden coffins excavated from ancient kings' tombs of Nakrang and Pro-Three-Kingdoms to the beginning period of the Three Kingdoms, and the private tombs of the middle stage at the Yi dynasty. The species of wooden coffins were identified as three softwoods(Thxus cuspidata, Sciodopitys verticillata, Pinus densiflora) and six hardswoods(Quercus acutissima, Quercus serrata, Zelkova serrata, Platycarya strobilarea, Alnus japonica and Morns spp.). Thxus cuspidata, wooden coffins of Nakrang kings' tombs, is distributed through Korea. However in previous examination it was known as Cunninghania lanceolata, native species in south China. Sciodopitys verticillata used as a wooden coffin of King Muryung's tomb was native to Japan. It was a material evidence proving the cultural exchange between Paekche Kingdoms and Japan in those days. Pinus densiflora was the species of wooden coffins excavated from private tombs in Yi dynasty, which was not found out from Pro-Three-Kingdoms and Three-Kingdoms. Quercus accutissima was used for making a trough shape wooden coffins at Daho-ri ancient tombs and Quercus serrata was used a outer wooden coffin of Nakrang kings' tombs. An adamant iron mongery might be used to manufacturing a trough shape wooden coffin. This indicates that a developed iron-manufacturing technics existed in Korea at that time. Zelkova serrata was used for making wooden coffins of Imdang and Kaya ancient tombs, Chunma and Hwangnam king tombs. Platycarya strobizacea was used for making wooden coffin of Daegok-ri, Alnus japonica for Daho-ri coffins and Morus spp. for Imdang coffins.

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Growth Response, Ecological Niche and Overlap between Quercus variabilis and Quercus dentata under Soil Moisture Gradient (토양수분구배에서 굴참나무와 떡갈나무의 생육반응, 생태 지위 및 중복역)

  • Park, Yeo-Bin;Kim, Eui-Joo
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.26 no.5
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    • pp.47-56
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    • 2023
  • The Quercus variabilis and Quercus dentata, which are said to be relatively drought tolerant among the important genus Quercus that represent deciduous broad-leaved forests in Korea. These two species are widely distributed worldwide in Korea, Japan and China (northern, central, western and eastern subtropical regions). This study compared the ecological niche breadth and overlap according to growth response in 4 soil moisture gradients for the two species and tried to reveal degree of competition and ecological niche characteristics. The ecological niche breadth was 0.977±0.020 for Q. variabilis and 0.979±0.014 for Q. dentata, the latter being slightly wider. And they were similar in 5 traits (stem length, leaf lamina length, leaf width length, stem weight, leaf petiole weight), Q. variabilis was more dominant in 4 traits (leaves number, stem diameter, leaf area, leaf petiole length), and Q. dentata was more dominant in 7 traits (root length, shoot length, plant weight, root weight, shoot weight, leaf weight, leaf petiole weight). The ecological niche overlap for soil moisture between the two species overlapped most in plant structure-related traits and least in photosynthetic organ-related traits such as petiole length. As a result of principal component analysis, degree of competition between the two species for soil moisture was more severe when the soil moisture condition was low than high. Among the measured traits that affect the two-dimensional distribution, 8 traits (Leaves number, Shoot length, Stem length, Plant weight, Root weight, Shoot weight, Stem weight, Leaves weight) were correlated with the factor 1, and 2 traits (Leaf width length, Leaf petiole weight) were correlated with the factor 2 (r>0.5). These results show that the ecological response of the two species to soil moisture is not a few traits involved, but several traits are involved simultaneously.

Molecular phylogeny of Astilbe: Implications for phylogeography and morphological evolution (노루오줌속(Astilbe)의 분자 계통: 계통지리 및 형질 진화에 대한 고찰)

  • Kim, Sang-Yong;Kim, Sung-Hee;Shin, Hyunchur;Kim, Young-Dong
    • Korean Journal of Plant Taxonomy
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    • v.39 no.1
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    • pp.35-41
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    • 2009
  • Astilbe (Saxifragaceae) is a genus well known for its disjunctive distribution in Asia and eastern North America. In this study, we reconstructed a molecular phylogeny of the genus using the sequences of ITS regions of nuclear ribosomal DNA. A total of 17 species representing major lineage of Astilbe and closely related taxa were included in the phylogenetic analyses. We obtained a Bayesian phylogenetic tree in which Saxifragopsis was positioned as a sister group to Astilbe. The Japanese endemic species, A.platyphylla was the most basal lineage within the genus. This species is well known for its distinct morphological features such as unisexual flowers, apetaly, and calyx with 7-11 lobes. Two species, A. biternata, a New World representative of the genus, and A. rivularis widely distributed in S. Asia, branched off early in the evolution of Astilbe. The remaining species formed a strongly supported core clade, which diverged into two robust geographical lineages: the first ("Japonica" clade) of species distributed in Japan, Taiwan, and Philippines and the other ("Rubra" clade), of taxa in China and Korea. The ITS phylogeny indicates that the Bering land bridges were the major route for the origin and dispersal of A. biternata. The two Taiwanese taxa and A. philippinensis were found to derive from the Japanese member, as the genus advanced southwards. The ITS phylogeny suggests that apetaly originated independently at least two times within the genus. Our results do not support Engler's classification system of the genus based on the leaf type (simple vs. compound), but reaffirm Hara's taxonomic idea which primarily considered the features of calyx.

Conservation of an Endangered CofEopsis coreana Uyeki in and ex situ and Development of II. Dynamics and Distribution Characteristics of the Coryzopsis coreana Population at Cheongsogol, Sunchon, Cholanam-do, Korea (보호종인 히 어 리의 자생지 내외 보전과 지역사회 협력 모델 개발 II. 순천(전남) 청소골 지역 히어리개체군의 분포특성 및 동태)

  • Lim Dong-Ok;Choung Heung-Lak;Kim Jong-Hong;Hwang In-Chun;Kim Chul-Hwan;Lee Hyun-Woo
    • Korean Journal of Environment and Ecology
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    • v.19 no.3
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    • pp.269-278
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    • 2005
  • The dynamics and distribution characteristics of Coryjopsis coreana popujation at Cheongsogol, Sunchon, Cholanam-do, Korea, were investigated. The Coryiopsis coreana pop ulation was distributed along the forest edge and it showed characteristics which were distributed on only directional slopes of the north, northeast or northwest. The Coryjopsis coreana constituted subtree or shrub layer in the forest, and its floristic composition was basically similar to those of adjacent areas where the species does not exist. The number of stump was 6.25 per $25\;m^2$, and each stump had 3 sproutings in average. The density of the Corylopsis coreana population in the study area was lower than that in other area, which suggests the population is declining in the study area.

Systematic Relationships of Korean Freshwater Snails of Semisulcospira, Koreanomelania, and Koreoleptoxis (Cerithiodiea; Pleuroceridae) revealed byMitochondrial Cytochrome Oxidase I Sequences

  • Kim, Woo-Jin;Kim, Dae-Hee;Lee, Jun-Sang;Bang, In-Chul;Lee, Wan-Ok;Jung, Hyung-Taek
    • The Korean Journal of Malacology
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    • v.26 no.4
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    • pp.275-283
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    • 2010
  • Many freshwater snail taxa are difficult to identify using morphological traits due to phenotypic plasticity. However, using of molecular DNA marker in combination with morphological traits can provide a reliable means for discriminating among freshwater snail taxa including cryptic species. To discriminate among Korean freshwater snail taxa and resolve their systematic relationships, wesequenced a fragment of mtDNA cytochrome oxidase I (COI) gene from 82 specimens collected from ten different sites distributed along the Korean peninsula. We identified more than seven freshwater snail taxa including cryptic species in Korea. Whereas traditional shell morphology of freshwater snails offers only weak discriminatory power for recognizing 'good' taxa, DNA sequence data provided positive and reliable identification. In addition, a major Semisulcospira clade was clearly separated from the remaining lineages observed including cryptic species. However, a phylogenetic tree inferred from the COI gene data did not fully resolve systematic relationships among pleurocerid taxa in Korea. Establishing more robust shell characteristics for identifying taxa unambiguously and hence improving traditional key shell morphology characters for freshwater snail species is an urgent requirement and will require more rigorous examination of all nominal taxa. While molecular data generated here will be useful for species identification and for describing the systematic relationships among Korean freshwater snails, further analysis will be required.