• Title/Summary/Keyword: next-generation method

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Genotype-Calling System for Somatic Mutation Discovery in Cancer Genome Sequence (암 유전자 배열에서 체세포 돌연변이 발견을 위한 유전자형 조사 시스템)

  • Park, Su-Young;Jung, Chai-Yeoung
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.17 no.12
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    • pp.3009-3015
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    • 2013
  • Next-generation sequencing (NGS) has enabled whole genome and transcriptome single nucleotide variant (SNV) discovery in cancer and method of the most fundamental being determining an individual's genotype from multiple aligned short read sequences at a position. Bayesian algorithm estimate parameter using posterior genotype probabilities and other method, EM algorithm, estimate parameter using maximum likelihood estimate method in observed data. Here, we propose a novel genotype-calling system and compare and analyze the effect of sample size(S = 50, 100 and 500) on posterior estimate of sequencing error rate, somatic mutation status and genotype probability. The result is that estimate applying Bayesian algorithm even for 50 of small sample size approached real parameter than estimate applying EM algorithm in small sample more accurately.

Distributed data deduplication technique using similarity based clustering and multi-layer bloom filter (SDS 환경의 유사도 기반 클러스터링 및 다중 계층 블룸필터를 활용한 분산 중복제거 기법)

  • Yoon, Dabin;Kim, Deok-Hwan
    • The Journal of Korean Institute of Next Generation Computing
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    • v.14 no.5
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    • pp.60-70
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    • 2018
  • A software defined storage (SDS) is being deployed in cloud environment to allow multiple users to virtualize physical servers, but a solution for optimizing space efficiency with limited physical resources is needed. In the conventional data deduplication system, it is difficult to deduplicate redundant data uploaded to distributed storages. In this paper, we propose a distributed deduplication method using similarity-based clustering and multi-layer bloom filter. Rabin hash is applied to determine the degree of similarity between virtual machine servers and cluster similar virtual machines. Therefore, it improves the performance compared to deduplication efficiency for individual storage nodes. In addition, a multi-layer bloom filter incorporated into the deduplication process to shorten processing time by reducing the number of the false positives. Experimental results show that the proposed method improves the deduplication ratio by 9% compared to deduplication method using IP address based clusters without any difference in processing time.

ABS Ratio Estimation Considering the Number of UEs in CRE Regions for LTE-A Heterogeneous Networks (LTE-A 기반 이종 네트워크에서 CRE 영역내 단말들의 수를 고려한 ABS 비율 산출 방법)

  • Sun, Jong-Suk;Roh, Byeong-hee
    • The Journal of Korean Institute of Next Generation Computing
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    • v.13 no.5
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    • pp.104-112
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    • 2017
  • The CRE (Cell Range Expansion) that selects the small cell with more efficient uplink resources has been developed by 3GPP to relieve the problem of the traffic imbalance due to the power differences between macro and small cells in HetNet. In addition, ABS (Almost Blank Subframes) has been proposed to resolve the signal interference problem due to the operation CREs. This paper proposes an effective method to calculate the ABS ratio by considering the proportion of the number of UEs in CRE and macro cell ranges, as well as the number of small cells in a macro cell. The proposed method has been implemented on the LTESim simulator, and compared with previously proposed methods. The experimental results show that the proposed method can improve the throughput and packet loss ratio performances. In particular, it is also shown that CRE bias values affect those performances, and there exist effective CRE bias values to derive the best performances.

Shape Generation and Optimization Technique of Space Frame Structures with Ellipse and Vault Complex Type (타원형 및 볼트복합형 스페이스 프레임 구조물의 형상 생성 및 최적화 방안)

  • Kim, Ho-Soo;Park, Young-Sin
    • Journal of Korean Association for Spatial Structures
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    • v.10 no.4
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    • pp.113-122
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    • 2010
  • Space frame structures are included in the large spatial structures and can adopt various structure types. But, it is not easy to choose the optimal member size and shape because it depends on the structural engineer's experience and the repeated trial and error. Therefore, in this study, the final goal is to help the designer with the selection of the optimum shape. First, various space frame structures with ellipse dome and vault complex types are chosen and the shape generation method is considered to generate the nodes, coordinates and members. In optimal design process of space frame structure, each node coordinate changes according to height variation or the number of rings. Therefore, the auto generation technique of nodes and members is required in order to consider this phenomenon in optimal design process. Next, the shape generation module is created, base on the shape generation method. This module is connected with the analysis module and the optimization algorithm. Finally, the example model is presented for the evaluation of the efficiency of optimization algorithms.

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Voltage Source HVDC System Controller Design (전압형 HVDC 시스템 제어기설계)

  • 곽주식
    • Proceedings of the KIPE Conference
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    • 2000.07a
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    • pp.645-650
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    • 2000
  • this paper deals with HVDC Light(High Voltage Direct Current) system using space vector PWM(SVPWM) method. Because the system of this paper has d-q control scheme for HVDC Light system. HVDC Light system represented in this paper is capable of controlling active and reactive power independently. For this system. V-I curve and control methods are proposed. Also this paper describes the design of a digital system for applications in power converters such as those that would be used in the next generation of HVDC system. Finally HVDC system is implemented using DSP TMS320C31

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XML Technology for Digitalizing Knowledgeware (XML 기술과 지식정보화 -인천국제공항 지식정보화 실 사례를 중심으로 -)

  • 이민남
    • Journal of the Korean Professional Engineers Association
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    • v.34 no.4
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    • pp.48-54
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    • 2001
  • XML technology is the study of the next-generation markup languages(eXtensible Markup Language), EDI document format, document management and electronic settlement Using XML. Since 1998 XML shows rapid growth for the method of implementing the Instance of actual document An actual case at this report of digitalizing knowledgeware which was accumulated for Inchon Airport construction Project is expected to be helped to document management and electronic settlement using XML document.

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A Study on WiBro Application to Telematics Wireless Communications Network (휴대인터넷의 텔레매틱스 무선통신 방식으로의 활용 방안)

  • Oh, Kil-Nam;Kim, Bong-Soo;Choi, Wan-Sik
    • Proceedings of the KIEE Conference
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    • 2005.10b
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    • pp.276-278
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    • 2005
  • This paper introduces the testbed configuration for telematics wireless communications using WiBro network, one of the next generation wireless communication networks. We review the architecture and core technology of WiBro network, and investigate WiBro based telematics services, WiBro testbed configuration, and function verification and test method for WiBro wireless communication access module.

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Transmission Time Analysis of WAP Packet Considering RLP Layer in CDMA Wireless Channel (CDMA 무선채널에서 RLP 계층을 고려한 WAP 패킷의 전송시간 분석)

  • 문일영;노재성;조성준
    • Proceedings of the IEEK Conference
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    • 2001.06a
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    • pp.57-60
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    • 2001
  • This paper has studied the WAP packet transmission time, using WTP SAR algorithm. One method that is improved transfer ability, SAR fragmented WTP total message down from upper layer and then packet is transmitted to RLP frame time slot. In this paper, we analysis the transmission time of WAP packet with variable HLP layer size on the CDMA wireless channel for next generation systems as well as PCS, DCS. From the results, we can obtain the WAP packet transmission time and optimal WTP packet size.

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Design and Implementation of the Interface between TS Demux and MPEG-4 System in DMB terminal (DMB 단말에서 TS Demux와 MPEG-4 시스템의 인터페이스 설계 및 구현)

  • 서주희;박주희;전종구
    • Proceedings of the IEEK Conference
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    • 2003.11b
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    • pp.251-254
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    • 2003
  • DMB is a next-generation multimedia broadcasting system that not only enables digital broadcasting services such as transmission of CD-duality audio, traffic information, and real-time stock information, but also allows reception of high-quality digital TV in high-speed driving conditions. In the DMB system, MPEG-2 TS(Transport Stream) multiplex method and MPEG-4 System SL(Sync Layer) have been selected as the delivery layer. In this paper, an efficient interface scheme between an MPEG-2 TS processing hardware and software-implemented MPEG-4 system within a DMB terminal device is proposed.

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The Method of QoS Providing in Next Generation Network (차세대 네트워크에서 QoS제공 방법)

  • 정의헌;김화성
    • Proceedings of the Korean Information Science Society Conference
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    • 2004.04a
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    • pp.766-768
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    • 2004
  • 현재 포화 상태에 이르고 있는 서비스 시장으로 인하여 통신 사업자들은 신규 시장을 확보하려는 노력을 보이고 있다. 이러한 노력은 하부 전달망의 특성에 독립적인 Open API를 이용하여 망의 기능을 개방하고 제 3자 서비스 개발자들과의 제휴를 통하여 다양한 형태의 지능형 서비스의 개발이 가능한 차세대 네트워크로 발전하도록 유도하고 있다. 차세대 네트워크에서는 다양한 멀티미디어를 이용한 서비스들이 개발될 것으로 예상된다. 이러한 멀티미디어 서비스는 QoS를 제공 없이는 성공할 수 없다 따라서 본 논문에서는 차세대 네트워크에서 QoS 제공을 위해 어떠한 노력이 진행되고 개발되어야 하는지 알아본다.

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