• 제목/요약/키워드: nematode identification

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Root-knot Nematode Species Distributing in Greenhouses and Their Simple Identification Scheme (시설원예지에 분포하는 뿌리혹선충의 종류 및 간이 동정법)

  • 김동근;이영기;박병용
    • Research in Plant Disease
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    • v.7 no.1
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    • pp.49-55
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    • 2001
  • Species and races of root-knot nematodes in greenhouses in southern Korea were investigated and a simple identification scheme was provided. Among 23 populations of root-knot nematodes, Meloidogyne arenaria race 2 was 59%, M. incognita race 1 was 23%, and an unknown race of M. incognita was 18%. Total length of M. arenaria juveniles was 411㎛(306-503㎛) and that of M. incognita was 384㎛(312-488㎛); however, the ranges of two species were overlapped and could not be used to distinguish the two species. Excretory pore in female head was a consistent character to differentiate M. arenaria and M. incognita.

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Systematic Study of Korean Stunt Nematodes (한국산 위축선충류의 분류학적 연구)

  • 최영연
    • Korean journal of applied entomology
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    • v.32 no.1
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    • pp.1-23
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    • 1993
  • A taxonomical revision of the Korean species of family Belonolaimidae has been undertaken. Twenty three species belonging to four different genera under two subfamily were reported from Korea hiteroto. Among them Tylenchorhynchus martini to T. annulatus. Merlinius acuminatus, M. brevidens, M. joctus, M. lenorus, M. nothus and M. koreanus to genus Geocenamus. M. clavicaudatus, M. macrurus, M. socialis to genus Amplimerlinius and Quinisulcius capitatus to Tylenchorhynchus capitatus were synonymized respectively. The keys of the each genera were proposed for identification. Distribution, host plants and photograps were included.

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Prionchulus oleksandri (Nematoda: Mononchida) from Korea

  • Kim, Jiyeon;Kim, Taeho;Ryu, Shi Hyun;Park, Joong-Ki
    • Animal Systematics, Evolution and Diversity
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    • v.34 no.4
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    • pp.194-198
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    • 2018
  • The genus Prionchulus Cobb, 1916 represents a group of predaceous nematodes belonging to the family Mononchidae Chitwood, 1937, and is found worldwide. However, only five species have been reported thus far from Korea. Prionchulus oleksandri Winiszewska and Susulovsky, 2003 is reported for the first time from Korea, from sediments collected from the Nakdong River. This species is distinguished from other Prionchulus species by its truncated lip region with small cephalic papillae and refringens vaginae. In this study, morphological characters(detailed morphometrics) of P. oleksandri are described and illustrated using optical microscopy. DNA barcode sequence information (the D2-D3 region of 28S rDNA, 18S rDNA, and internal transcribed spacer rDNA) is also provided for the molecular identification of the species.

A case of hepatic anisakidosis caused by Anisakis pegreffii mimicking liver cancer

  • Minoru Yamada;Fumi Murakoshi;Hisashi Ikoma;Osamu Inamori;Akio Yanagisawa;Eiichi Konishi
    • Parasites, Hosts and Diseases
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    • v.61 no.3
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    • pp.292-297
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    • 2023
  • Extra-gastrointestinal anisakidosis is rare. We herein report an Anisakis pegreffii infection in a patient with hepatic anisakidosis diagnosed based on its molecular identification. A 71-year-old male patient had a hepatic tumor presenting as a low-density area of 20 mm in diameter in segment 6 of the liver on abdominal ultrasonography, computed tomography, and magnetic resonance imaging. The surgically resected pathological specimen revealed a necrotizing eosinophilic granuloma containing nematode larvae, possibly an Anisakis larva. Molecular and phylogenetic analysis demonstrated Anisakis larvae belonging to A. pegreffii. The present results will help identify and characterize unknown Anisakis species in histological sections.

Proteome identification of common immunological proteins of two nematode parasites

  • Shin Ae Kang;Hak Sun Yu
    • Parasites, Hosts and Diseases
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    • v.62 no.3
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    • pp.342-350
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    • 2024
  • Although helminth parasites have different life cycles, their hosts share similar immune responses involving Th2 cell-type. Here, we extracted proteins from the larvae of Anisakis simplex complex and Trichinella spiralis to identify common and specific antigens (or allergens) associated with the Th2 immune response. We performed two-dimensional electrophoresis analysis and Matrix-assisted laser desorption ionization-time of flight/time of flight (MALDI-TOF/TOF) experiments. We found 13 potentially immunogenic proteins, which included 5 spots specific to T. spiralis and 8 common to T. spiralis and A. simplex, by tandem mass spectrometry. These molecules were identified structurally as actin, tropomyosin, col cuticle N domain-containing protein, and heat shock proteins. We also identified molecules related to parasite-host immune modulation and interactions. Our results may contribute to reveal potential roles of immunological proteins in parasite-derived immune modulation.

Studies on HG Type of Heterodera glycines in Korea (국내 콩 씨스트선충의 HG type 분석)

  • Kim, Donggeun;Choi, Insoo;Han, Wonyoung;Ryu, Younghyun;Kim, Myungsik;Bae, Changhwan
    • Research in Plant Disease
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    • v.19 no.1
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    • pp.31-35
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    • 2013
  • Thirteen soybean cyst nematode (SCN) (Heterodera glycines) populations collected in Korea were examined in their HG type by their reproductivity on 7 Plant Introduction indicators for the identification of HG type. Six HG types were identified, HG type 0, 2, 5, 2.5, 1.2.7, and 2.5.7. HG type 2.5 was the most frequent (4 samples, 30.8%), followed by HG type 2.5.7 (3 samples, 23.0%). About 76.9% of SCN populations were reproduced on PI 88788, followed by PI 209332 (61.5%), PI 548316 ('Cloud') (30.8%), and PI 548402 ('Peking') (7.7%). No population could reproduce on PI 90763, PI 437654, thus, they could be used for resistant source for developing SCN resistant soybean in Korea.

Identification and Characterization of Expansins from Bursaphelenchus xylophilus (Nematoda: Aphelenchoididae)

  • Lee, Dae-Weon;Seo, Jong Bok;Kang, Jae Soon;Koh, Sang-Hyun;Lee, Si-Hyeock;Koh, Young Ho
    • The Plant Pathology Journal
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    • v.28 no.4
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    • pp.409-417
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    • 2012
  • We identified two novel expansin (EXP) genes in the expressed sequence tag database of Bursaphelenchus xylophilus, designated as Bx-EXPB2 and -EXPB3. Novel Bx-EXPBs encoded 150 amino acids and their similarities in coding sequence were 70.7-84.0% to the previously reported EXPB1 of B. xylophilus. Bx-EXPB2 and Bx-EXPB3 were clustered with Bx-EXPB1 and Bm-EXPB1, respectively, forming the independent phylogeny with other nematode EXPs. All identified Bx-EXPBs contained the signal peptide and were only expressed during the propagative stage, suggesting that they are secreted to facilitate nematode migration through hosts by loosening cell walls during infection. Quantitative real-time PCR analysis showed that the relative accumulation of Bx-EXPB3 mRNAs was the highest among the three Bx-EXPs examined and the order of mRNA accumulation was as follows: Bx-EXPB3 > Bx-EXPB2 >> Bx-EXPB1. Homology modeling of Bx-EXPBs showed that the structurally optimum template was EXLX1 protein of Bacillus subtilis, whichshared residues essential for catalytic activity with Bx-EXPB1 and Bx-EXPB2 except for Bx-EXPB3. Taken together, Bx-EXPB1 and Bx-EXPB2 may be involved migration through plant tissues and play a role in pathogenesis.

Ovicidal Activity of Lactic Acid Produced by Lysobacter capsici YS1215 on Eggs of Root-Knot Nematode, Meloidogyne incognita

  • Lee, Yong Seong;Naning, Kyaw Wai;Nguyen, Xuan Hoa;Kim, Sun Bae;Moon, Jae Hak;Kim, Kil Yong
    • Journal of Microbiology and Biotechnology
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    • v.24 no.11
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    • pp.1510-1515
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    • 2014
  • Lysobacter capsici YS1215 isolated from soil previously showed nematicidal potential for biological control of the root-knot nematode. In this study, lactic acid, a nematicidal compound, was isolated from culture filtrate of YS1215, and its ovicidal activity was investigated. Purification and identification of lactic acid were performed by a series of column chromatographies and identified by $^1H$ and $^{13}C$ NMR spectra and GC-MS analysis. Our results showed that bacterial culture filtrate containing lactic acid significantly inhibited egg hatching. The lowest egg hatch rate (5.9%) was found at a high concentration ($25 {\mu}l/ml$) of lactic acid at 5 days after incubation, followed by 20 (15.2%), 15 (23.7%), 10 (29.8%), and $5(36.4%){\mu}l/ml$, while egg hatching in the control (sterile distilled water) was 44.5%. This is the first report of lactic acid as an ovicidal compound, and it may be considered as an alternative of chemical pesticide against root-knot nematodes.

Incidence of Major Plant-parasitic Nematodes in Main Producing Areas of Strawberry in Korea (국내 딸기 시설재배 주산단지 토양 내의 주요 식물기생선충 감염 현황)

  • Ko, Hyoung-Rai;Lee, Min-A;Kim, Eun-Hwa;Kim, Se-Jong;Lee, Jae-Kook
    • Research in Plant Disease
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    • v.22 no.4
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    • pp.249-256
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    • 2016
  • To investigate the incidence of plant-parasitic nematodes from plastic-house fields of strawberry, 170 soil samples were collected from the main producing area of strawberry in Korea from 2014 to 2015. Based on the investigation, root-lesion nematode (RLN; Pratylenchus spp.) and root-knot nematode (RKN; Meloidogyne spp.) are the most important pests in plastic-house fields of strawberry with 57% and 36% incidences, respectively. Among the collected fields, 96 and 63 fields were infected RNL and RKN, respectively with 44 fields (38.8%) being detected at both nematode. High degree of incidence of both nematodes were observed in the regions of Jinju, Gyeonnam Province, Korea. For identification of species level, phylogenetic and distance analysis were performed using RLN and RKN isolates generated from the regions of Jinju. The results indicated that the RLN and RKN isolates were Pratylenchus vulnus and Meloidogyne hapla, respectively. This study showed that P. vulnus and M. hapla could be most dominant species in plastic-house fields of strawberry. This data will provide basic knowledge for development of effective control strategies.

Caenorhabditis elegans: A Model System for Anti-Cancer Drug Discovery and Therapeutic Target Identification

  • Kobet, Robert A.;Pan, Xiaoping;Zhang, Baohong;Pak, Stephen C.;Asch, Adam S.;Lee, Myon-Hee
    • Biomolecules & Therapeutics
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    • v.22 no.5
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    • pp.371-383
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    • 2014
  • The nematode Caenorhabditis elegans (C. elegans) offers a unique opportunity for biological and basic medical researches due to its genetic tractability and well-defined developmental lineage. It also provides an exceptional model for genetic, molecular, and cellular analysis of human disease-related genes. Recently, C. elegans has been used as an ideal model for the identification and functional analysis of drugs (or small-molecules) in vivo. In this review, we describe conserved oncogenic signaling pathways (Wnt, Notch, and Ras) and their potential roles in the development of cancer stem cells. During C. elegans germline development, these signaling pathways regulate multiple cellular processes such as germline stem cell niche specification, germline stem cell maintenance, and germ cell fate specification. Therefore, the aberrant regulations of these signaling pathways can cause either loss of germline stem cells or overproliferation of a specific cell type, resulting in sterility. This sterility phenotype allows us to identify drugs that can modulate the oncogenic signaling pathways directly or indirectly through a high-throughput screening. Current in vivo or in vitro screening methods are largely focused on the specific core signaling components. However, this phenotype-based screening will identify drugs that possibly target upstream or downstream of core signaling pathways as well as exclude toxic effects. Although phenotype-based drug screening is ideal, the identification of drug targets is a major challenge. We here introduce a new technique, called Drug Affinity Responsive Target Stability (DARTS). This innovative method is able to identify the target of the identified drug. Importantly, signaling pathways and their regulators in C. elegans are highly conserved in most vertebrates, including humans. Therefore, C. elegans will provide a great opportunity to identify therapeutic drugs and their targets, as well as to understand mechanisms underlying the formation of cancer.