• Title/Summary/Keyword: national database

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National Wind Atlas Database and Visualization Based on IDL (IDL 기반의 국가바람지도 데이터베이스화 및 가시화)

  • Kim, Hyun-Goo;Lee, Sang-Woo;Yi, Jong-Hyuck;Lee, Soon-Hwan
    • New & Renewable Energy
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    • v.5 no.3
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    • pp.13-21
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    • 2009
  • National wind atlas of Korea requires effective database management because it has been constructed by 5-year long-term time-series numerical wind simulation. Therefore, database of the national wind map has been developed to increase data structure efficiency using IDL scientific programming language which has outstanding feature in mega-capacity numerical dataset. Visualization module also has been developed under IDL environment and it is anticipated to maximize post processing efficiency and applicability of the national wind map especially in the standing points of researchers and developers.

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Protein Structure Prediction Using Associative Classification (연관적 분류기법을 이용한 단백질 구조예측)

  • Cho Kyung-Hwan;Lee Heon-Gyu;Lee Bum-Ju;Jung Kwang-Su;Ryu Keun-Ho
    • Proceedings of the Korea Information Processing Society Conference
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    • 2006.05a
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    • pp.31-34
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    • 2006
  • 단백질 구조로부터 단백질 기능을 예측하고자 하는 일은 생명정보학 에서 중요한 이슈 및 연구과제가 되어 왔다. 그 중 단백질의 3 차 구조를 이해하고 분류하는 데에는 계층적인 분류방법을 이용하는 CATH database가 사용되고 있다. 이 논문에서는 CATH database 의 계층적 분류의 특성을 이용하되, 단백질의 3 차 구조가 아닌 단백질 서열로부터 데이터마이닝 기술을 적용, 마이닝 기법 중 순차패턴과 연관적 분류 기법을 이용하여 CATH database 의 계층별 구조 분류 기법을 제안 하였다.

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Implementation of On-Line Survey and Analysis System based on Database Structure

  • Park, Hee-Chang;Nam, Ki-Seong;Kim, Hee-Jae;Song, Gum-Min;Myung, Ho-Min
    • Journal of the Korean Data and Information Science Society
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    • v.13 no.1
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    • pp.1-16
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    • 2002
  • In this paper, we suggest and implement an on-line survey and analysis system based on the database structure. We can do trends analysis in this system and reduce the number of function because we can treat basic algorithms on the database.

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An Information-based Model for an Interactive Web Service with Agricultural Biotechnology

  • Kim, Chang-Kug;Seo, Young-Joo;Park, Dong-Suk;Hahn, Jang-Ho
    • Genomics & Informatics
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    • v.9 no.2
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    • pp.85-88
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    • 2011
  • The National Agricultural Biotechnology Information Center (NABIC) constructed an agricultural biology-based infrastructure and developed a biological information-based database. The major functions of the NABIC are focused on biotechnological developments for agricultural bioinformatics and providing a web-based service to construct bioinformatics workflows easily, such as protein function prediction and genome systems biology programs. The NABIC has concentrated on the functional genomics of major crops, building an integrated biotechnology database for agro-biotech information that focuses on the proteomics of major agricultural resources, such as rice, Chinese cabbage, rice Ds-tagging lines, and microorganisms.

A Study on the Analysis and Methods to Improve the Management System for Building Energy Database (국가 건물에너지통합관리시스템의 데이터 품질 분석 및 개선방안 연구)

  • Kim, Sung-Min;Yoon, Jong-Don;Kwon, Oh-In;Shin, Sung-Eun
    • Journal of Energy Engineering
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    • v.25 no.1
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    • pp.131-144
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    • 2016
  • Damage occur frequently around the world on climate change and the main cause of greenhouse gas emissions regulation is growing. To this end, the government has built integrated management system for national building energy. The building energy information is total 6.8 million complex. Integrated management system for national building energy database are matched building registers information and energy information of the supply agencies. However, the matching process has its limitations so advanced work is in progress continuously. This study analyzed integrated management system for national building energy database quality and limitations and deduce improvement plan to increase system reliability and availability. The existing database matching average rate is 85.6%. 58.2% of the total non-matching data type has no building information. To ensure the ease of new database matching and the accuracy of the existing database matching, address standarization and building properties system are needed between building information and energy information. Also, The system construction is required to include information on other energy sources like petroleum energy which has high proportion of non-urban areas and small residential areas and renewable energy which has high potential in development and utilization.

Transportation Digital Map Quality Guarantee Scheme for Analytic Network Building (분석용 네트워크구축을 위한 교통주제도 품질확보방안)

  • Choi Jung-Min;Joo Yong Jin;Choi Ae Sim
    • Spatial Information Research
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    • v.12 no.3
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    • pp.285-298
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    • 2004
  • Transportation digital map has built based on NGIS (national geography institute's 1 :5000 digital database) which derived from the aerial photo materials. Transportation digital map is a part of National Transportation Database Building Project carried out by the Korea Transport Institute and Ministry of Construction and Transportation. Transportation digital map for the purpose of transportation plan and investment has been updated and corrected the NGIS database especially for road network. Transportation digital map database is essential basic data fully applied for transportation policy and planning. The database must be reliable and objective to be applied for national transportation policy decision and transportation analysis. In addition, it needs accuracy and currentness to reflect the road network for the survey year. To satisfy the purpose of the database, following steps are necessary first, data Production and building has to be done by guideline of survey and database building. Secondly, geometric and logical errors which can occur during the survey and database building should be carefully detected. Thirdly, sectional guideline for database examination and procedure needs to be set up systematically and coherently This study is about examination guidelines for section and procedure on nodes and links which are essential object in transportation digital map database. According to the type of error, consistent and systematic error examination can lead to quality guarantee for objective and reliable database.

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KUGI: A Database and Search System for Korean Unigene and Pathway Information

  • Yang, Jin-Ok;Hahn, Yoon-Soo;Kim, Nam-Soon;Yu, Ung-Sik;Woo, Hyun-Goo;Chu, In-Sun;Kim, Yong-Sung;Yoo, Hyang-Sook;Kim, Sang-Soo
    • Proceedings of the Korean Society for Bioinformatics Conference
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    • 2005.09a
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    • pp.407-411
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    • 2005
  • KUGI (Korean UniGene Information) database contains the annotation information of the cDNA sequences obtained from the disease samples prevalent in Korean. A total of about 157,000 5'-EST high throughput sequences collected from cDNA libraries of stomach, liver, and some cancer tissues or established cell lines from Korean patients were clustered to about 35,000 contigs. From each cluster a representative clone having the longest high quality sequence or the start codon was selected. We stored the sequences of the representative clones and the clustered contigs in the KUGI database together with their information analyzed by running Blast against RefSeq, human mRNA, and UniGene databases from NCBI. We provide a web-based search engine fur the KUGI database using two types of user interfaces: attribute-based search and similarity search of the sequences. For attribute-based search, we use DBMS technology while we use BLAST that supports various similarity search options. The search system allows not only multiple queries, but also various query types. The results are as follows: 1) information of clones and libraries, 2) accession keys, location on genome, gene ontology, and pathways to public databases, 3) links to external programs, and 4) sequence information of contig and 5'-end of clones. We believe that the KUGI database and search system may provide very useful information that can be used in the study for elucidating the causes of the disease that are prevalent in Korean.

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Validation of Administrative Big Database for Colorectal Cancer Searched by International Classification of Disease 10th Codes in Korean: A Retrospective Big-cohort Study

  • Hwang, Young-Jae;Kim, Nayoung;Yun, Chang Yong;Yoon, Hyuk;Shin, Cheol Min;Park, Young Soo;Son, Il Tae;Oh, Heung-Kwon;Kim, Duck-Woo;Kang, Sung-Bum;Lee, Hye Seung;Park, Seon Mee;Lee, Dong Ho
    • Journal of Cancer Prevention
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    • v.23 no.4
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    • pp.183-190
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    • 2018
  • Background: As the number of big-cohort studies increases, validation becomes increasingly more important. We aimed to validate administrative database categorized as colorectal cancer (CRC) by the International Classification of Disease (ICD) 10th code. Methods: Big-cohort was collected from Clinical Data Warehouse using ICD 10th codes from May 1, 2003 to November 30, 2016 at Seoul National University Bundang Hospital. The patients in the study group had been diagnosed with cancer and were recorded in the ICD 10th code of CRC by the National Health Insurance Service. Subjects with codes of inflammatory bowel disease or tuberculosis colitis were selected for the control group. For the accuracy of registered CRC codes (C18-21), the chart, imaging results, and pathologic findings were examined by two reviewers. Sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV) for CRC were calculated. Results: A total of 6,780 subjects with CRC and 1,899 control subjects were enrolled. Of these patients, 22 subjects did not have evidence of CRC by colonoscopy, computed tomography, magnetic resonance imaging, or positron emission tomography. The sensitivity and specificity of hospitalization data for identifying CRC were 100.00% and 98.86%, respectively. PPV and NPV were 99.68% and 100.00%, respectively. Conclusions: The big-cohort database using the ICD 10th code for CRC appears to be accurate.

Korean Pharmacogenomic Database: Pharmacogenomic Haplotype Analysis of the Korean Population and Ethnic Comparisons

  • Kang, Tae-Sun;Woo, Sun-Wook;Park, Hyun-Joo;Roh, Jae-Sook
    • Biomolecules & Therapeutics
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    • v.16 no.2
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    • pp.77-81
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    • 2008
  • The major aim of the Korean Pharmacogenomic Database (KPD) is to offer to users a "bridging" function, making the search for useful information easier. This database has also been established to collect unique Korean genotype data from other databases and to directly link these data to other major databases that offer more informative data. In this way, searches for information about new drug developments and easier and faster evaluation of the more complex and larger databases are possible. The KPD is located at the National Institute of Toxicological Research homepage (http://www.nitr.go.kr/nitr/contents/m134700/view.do), and offers Korean single-nucleotide polymorphism (SNP) information for 154 genes and haplotype information. It also compares the Korean SNP and haplotype frequencies with those of the other ethnic groups registered in the International HapMap. Through the Pharmacogenomic Information and Education facility, we also provide evaluators and the public with information about the concept of pharmacogenomic information, research trends, and the drug regulations of other countries. Because the drug responses of Koreans are not necessarily the same as those of Chinese or Japanese people, it is expected that the systematic operation of the KPD will allow the definition of racial differences and various genomic biomarkers (haplotypes or SNPs) for use in bridging studies and in the approval of new drugs.

AN ABSTRACTION MODEL FOR IN-SITU SENSOR DATA USING SENSORML

  • Lee Yang Koo;Jung Young Jin;Park Mi;Kim Hak Cheol;Lee Chung Ho;Ryu Keun Ho
    • Proceedings of the KSRS Conference
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    • 2005.10a
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    • pp.337-340
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    • 2005
  • Context-awareness techniques in ubiquitous computing environment provide various services to users who need to get information via the analysis of collected information from sensors in a spatial area. Context-awareness has been increased in ubiquitous computing and is applied to many different applications such as disaster management system, intelligent robot system, transportation management system, shopping management system, and digital home service. Many researches have recently focused on services that provide the appropriate information, which are collected from Internet by different kinds of sensors, to users according to context of their surrounding environment. In this paper, we propose an abstraction model to manage the large-scale contextual information and their metadata which are collected from different kinds of in-situ sensors in a spatial area and are presented them on the web. This model is composed of the modules expressing functional elements of sensors using sensorML(Sensor Model Language) based on XML language and the modules managing contextual information, which is transmitted from the sensors.

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