• Title/Summary/Keyword: narrow-sense heritability

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Diallel Cross Analysis of Characters in Barley (이면교잡에 의한 대맥형질의 유전분석)

  • Chung, Won-Bok;Chung, Dae-Soo;Takeda, Kazuyoshi;Sato, Kazuhiro
    • Journal of Life Science
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    • v.7 no.1
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    • pp.59-65
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    • 1997
  • In this experiment, gene actions were analysized for seven barley parents in order to obtain basic information on their genetic improvement by diallel crosses. The results obtained were summarized as follows. In analysis of variance, additive, dominant, maternal and reciprocal effects were observed significantly for culm length, tiller number, number of spiked per plant, culm diameter, awn length, leaf width, number of grains per spike, and 1000 grain weight. Over-dominance was shown by Vr-Wr graphic analysis in five characters such as tiller number, number of spikes per plant, length of flag leaf, number of grains per spike, and 1000 grain weight, and partial dominance in four characters such as culm length, culm diameter, awn length, and leaf width. Component of genetic varience analyzed for four characters such as culm diameter, awn length, length of flag leaf, and leaf width showed that additive effects were higher than dominant effects. Culm length, tiller number, number of spikes per plant, number of grains per spike, and 1000 grain weight showed dominant effects higher than additive effects. The narrow-sense heritability for awn length, leaf width, and number of grains per spike showed high values as more than 0.62, while broad-sense heritability for culm length, number of spikes per plant, culm diameter, awn length, leaf width, number of grains per spike, and 1000 grain weight showed high values as more than 0.65.

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Diallel Analysis for Rice Allelopathic Potential against Barnyardgrass Assessed in Field Condition

  • Junaedi, Ahmad;Lee, Sang Bok;Chung, Ill Min;Kim, Kwang Ho
    • Korean Journal of Breeding Science
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    • v.40 no.1
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    • pp.8-14
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    • 2008
  • A complete diallel cross was performed to determine the inheritance of allelopathic potential and combining ability of six rice germplasm that showed different level of allelopathic potential against barnyardgrass. Parents and F1 of 30 crosses were assessed for allelophatic potential in field condition. Barnyardgrass (Echinochloa crus-galli (L.) Beauv. var. frumentaceae) was used for rice allelopathic potential indicator which was observed in height and shoot dry weight, then suppression percentage were calculated by comparing to barnyardgrass grown in control plot (no rice). It was found that general combining ability showed no significant effect, whereas specific combining ability and reciprocal effect were significant. Variance analysis confirmed that genetic control of allelopathic potential in rice against barnyardgrass was mostly directed by dominance gene effect. The dominant genes were associated with high allelopathic potential and recessive genes were associated with low allelopathic potential. Heritability in broad sense for barnyardgrass dry weight suppression was around 41%; whereas for barnyardgrass height suppression was 51%. However, heritability in narrow sense was very low. The finding suggests that accumulation of genes associated with allelopathic potential would be a strategy to develop promising varieties in reference with the specific combining ability of cross combinations.

Genetic Analysis of Quantitative Characters by Diallel Cross in Cotton (목화의 F2잡종집단에 대한 유전분석)

  • 정원복
    • Journal of Life Science
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    • v.12 no.2
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    • pp.213-218
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    • 2002
  • The experiment was conducted to get basic information for cotton breeding program through four-variety diallel cross population. Additive, dominant, maternal, and reciprocal effect were observed significantly for days to maturity. Based on the Vr-Wr graphical analysis, the characters, number of bolls per plant, boll weight, seed and lint weight per boll, lint weight per boll, width of seed, 100-seed weight, days to flowering, and days to maturity were found to inherit incomplete dominance, and the characters of number of bolls per plant, width of seed, number of seeds per boll, and length of seed were assumed to inherit over dominance. The component of genetic variance analysis for boll weight, seed and lint weight per boll, lint weight per boll, number of seeds per boll, length of seed, and days to flowering showed that additive effects were higher than dominant effects. The narrow-sense heritability(h$_2$N) for boll weight, seed and lint weight per boll, lint weight per boll, days to flowering, and days to maturity showed high values as more than 43.19%. The estimate of broad-sense heritability(h$_2$B) value was higher than that of h$_2$N because of the low importance of dominance effects.

Correlation and Combining Ability of Plant Spreading Chracteristics in F1 Hybrids by Diallel Cross in Petunia hybrida (페튜니아 일대 잡종에서 덩굴성 관련형질의 상호관계 및 조합능력)

  • Song, Cheon Young
    • FLOWER RESEARCH JOURNAL
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    • v.17 no.3
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    • pp.179-184
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    • 2009
  • The correlation and combining abilities related with plant spreading characteristics of plant height, plant width, stem length, internode length, number of stem, number of leaves, and number of flower were studied in the $F_1s$ of 10 crosses from the partial five-parent diallel cross in Petunia hybrida. The plant width showed highly positive correlation with internode length, and number of flower. The mean squares of general combining ability(GCA) and specific combining ability(SCA) were highly significant for plant width, number of stem, number of leaves, and number of flowers. The mean square values of GCA were greater than those of SCA for all the characters, showing preponderance of additive gene actions for these characters. The lines of D and I for plant width and length of stem showed relatively high GCA effects. The crosses of $D{\times}I$, $F{\times}I$, and $G{\times}I$ exhibited high SCA effects on plant width, especially $G{\times}I$ effected in internode length and number of flower. The broad sense heritability was generally high compared to narrow sense one. Plant width and stem length, and internode length related to spreading growth showed the higher heritability than the other characters in the broad and narrow sense.

Inter-Relationship and Combining Ability of Plant Growth in F1 Hybrids of Petunia hybrida (페튜니아 일대 잡종에서 생육관련 형질의 상호관계 및 조합능력)

  • Song, C.Y.;Hong, K.H.;Kang, Y.K.
    • Journal of Practical Agriculture & Fisheries Research
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    • v.3 no.1
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    • pp.85-93
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    • 2001
  • The inter-relationship and combining abilities of characters for leaf length, leaf width, branch number, leaf number, leaf area, fresh weight and dry weight were studied in the F1 combination of 15 crosses from the partial six-parent diallel cross in Petunia hybrida. The leaf area, fresh weight and dry weight showed high positive correlation together with the other growth characters such as leaf length, leaf width, branch number, leaf number. The mean squares of general combining ability(GCA) and specific combining ability(SCA) were highly significant for all the growth characters. The estimates of variance components of SCA were greater than those of GCA for all the characters, showing preponderance of non-additive gene actions for these characters. GCA effect was high in the lines of D and G for leaf length and fresh weight, and in the lines of C and D for branch number, leaf number, leaf area and fresh weight. The crosses of D×E, D×G, and E×G exhibited high SCA effect for all the growth characters such as leaf length, leaf width, branch number, leaf number, leaf area, fresh weight, and dry weight. The broad sense heritability was generally high compared to narrow sense one in the 7 characters. The highest heritability of the broad and narrow sense was shown in the leaf width and dry weight.

Genome-wide Association Study (GWAS) and Its Application for Improving the Genomic Estimated Breeding Values (GEBV) of the Berkshire Pork Quality Traits

  • Lee, Young-Sup;Jeong, Hyeonsoo;Taye, Mengistie;Kim, Hyeon Jeong;Ka, Sojeong;Ryu, Youn-Chul;Cho, Seoae
    • Asian-Australasian Journal of Animal Sciences
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    • v.28 no.11
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    • pp.1551-1557
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    • 2015
  • The missing heritability has been a major problem in the analysis of best linear unbiased prediction (BLUP). We introduced the traditional genome-wide association study (GWAS) into the BLUP to improve the heritability estimation. We analyzed eight pork quality traits of the Berkshire breeds using GWAS and BLUP. GWAS detects the putative quantitative trait loci regions given traits. The single nucleotide polymorphisms (SNPs) were obtained using GWAS results with p value <0.01. BLUP analyzed with significant SNPs was much more accurate than that with total genotyped SNPs in terms of narrow-sense heritability. It implies that genomic estimated breeding values (GEBVs) of pork quality traits can be calculated by BLUP via GWAS. The GWAS model was the linear regression using PLINK and BLUP model was the G-BLUP and SNP-GBLUP. The SNP-GBLUP uses SNP-SNP relationship matrix. The BLUP analysis using preprocessing of GWAS can be one of the possible alternatives of solving the missing heritability problem and it can provide alternative BLUP method which can find more accurate GEBVs.

Heritability Estimated Using 50K SNPs Indicates Missing Heritability Problem in Holstein Breeding

  • Shin, Donghyun;Park, Kyoung-Do;Ka, Sojoeng;Kim, Heebal;Cho, Kwang-hyeon
    • Genomics & Informatics
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    • v.13 no.4
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    • pp.146-151
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    • 2015
  • Previous studies in Holstein have shown 35% to 51.8% heritability in milk production traits, such as milk yield, fat, and protein, using pedigree data. Other studies in complex human traits could be captured by common single-nucleotide polymorphisms (SNPs), and their genetic variations, attributed to chromosomes, are in proportion to their length. Using genome-wide estimation and partitioning approaches, we analyzed three quantitative Holstein traits relevant to milk production in Korean Holstein data harvested from 462 individuals genotyped for 54,609 SNPs. For all three traits (milk yield, fat, and protein), we estimated a nominally significant (p = 0.1) proportion of variance explained by all SNPs on the Illumina BovineSNP50 Beadchip ($h^2_G$). These common SNPs explained approximately most of the narrow-sense heritability. Longer genomic regions tended to provide more phenotypic variation information, with a correlation of 0.46~0.53 between the estimate of variance explained by individual chromosomes and their physical length. These results suggested that polygenicity was ubiquitous for Holstein milk production traits. These results will expand our knowledge on recent animal breeding, such as genomic selection in Holstein.

Correlation and Combining Ability of Days to Germination, Flowering and Ripening in F1 Hybrids of Petunia hybrida (페튜니아 일대 잡종에서 발아, 개화 및 종자 등숙소요일수 관련형질의 상호관계 및 조합능력)

  • Song, C.Y;Park, S.C.;Park, N.B.
    • Journal of Practical Agriculture & Fisheries Research
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    • v.3 no.1
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    • pp.94-101
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    • 2001
  • The correlation among days to germination, days to flower, days to seed ripening and number of seeds per a pod and their combining were studied in 15 F1s from the partial six-parent diallel cross in Petunia hybrida. The days to flowering, days to germination and seed number per a pod showed high positive correlation together, however germination percentage and number of seed showed negative correlation with days to ability(SCA) were highly significant for all the characters. The estimates of variance components of SCA were greater than those of GCA for all the characters, showing preponderance of non-additive gene actions for these characters. The line of A and C showed relatively high GCA effect for days to germination and days to flower and the lines of C and G for germination, days to seed ripening and number of seeds per a pod. The crosses of D×G and E×F exhibited high SCA effect for decreasing days to flower and days to germination, and increasing germination percentage and number of seeds per a pod. The broad sense heritability was generally high compared to narrow sense one in the 5 characters. The higher heritability values of both broad and narrow sense were shown in the days to ripening and number of seeds per a pod.

Induced Mutant by Gamma Rays and Genetic Analysis for Mutant Characters in Flue-cured tobacco Variety (Nicotiana tabacum L) III. Heritability and Genobpic Correlation for Mutant Characters in Flue-cured Tobacco Variety (황색종 연초 품종의 Gamma 선에 의한 돌연변이 유기 및 변이형질의 유전분석 III. 변이형질의 유전력과 형질 상호 관계)

  • Jung, Seok-Hun;Lee, Seung-Chul;Kim, Heung-Bae
    • Journal of the Korean Society of Tobacco Science
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    • v.14 no.2
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    • pp.126-132
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    • 1992
  • This experiment was conducted to examine estimates of heterosis, degree of dominance, heritability and phenotypic and genotypic correlation for several mutant characters in flue-cured tobacco variety. Significant heterosis was noted, recording 2.73 and 6.16% for leaf width, -6.86 and -4.72 for leaf shape index, 19.8 and 23.4% for bacterial wilt disease index in Fl an4 F2 generation, respectively, and -1.44 for days to flower in F2 generation. And also leaf width was appeared partial dominance in Fl, and leaf shape index in Fl and F2, Leaf width in F2 was appeared overdominance. Estimated heritabilities in the broad sense ranged from 0.77 to 0.87 for plant and stalk height and days to flower, while those of leaf number, leaf length and width, leaf shape index and bacterial wilt disease index ranged from 0.50 to 0.65. And the heritabilities in the narrow sense were appeared 0.64 and 0.72 for stalk and plant height, respectively, and the others were ranged from 0.32 to 0.47 Positive genotpic correlations appeared among plant height, stalk height, leaf length and leaf width, and between leaf shape index ands day to flower. And negative genotypic correlations appeared between leaf shape index and plant height and stalk height and leaf width, and between bacterial wilt disease index and leaf length.

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Genetic Analysis for Weight of Matured Silkworm and Number of Eggs Laid in Hybrid Population of the Silkwom, Bombyx mori (누에의 숙잠체중과 산란성에 대한 유전분석)

  • 정원복
    • Journal of Sericultural and Entomological Science
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    • v.35 no.2
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    • pp.100-104
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    • 1993
  • The genetics analysis for weight of matured silkworm(WMS) and number of eggs produced per moth(NEM) was studied by the seven parents diallel. Mean squares of additive effect, dominant effect, maternal effect and reciprocal effect were significant for two characters observed. The component of genetic variance analysis for WMS and NEM showed that dominant effect was higher than additive effect. Narrow sense heritability(h2ns) estimates were 0.773 and 0.228, in the WMS and NEM. The estimate of broad sense heritability(h2bs) value was higher than that of h2ns because of the low importance of dominance effect. Incomplete dominance was shown by Vr-Wr graphic analysis in the weight of matured silkworm and overdominance in the number of eggs produced per moth. In general combining ability effect, Jam 107 and Jam 124 was showed positively high for WMS and Jam 107 and S1 was expressed positively high for NEM. In specific combining ability effect, hybrids in S1XC51, S1XJam124 and Jam 107XJam 108 were exhibited positively high for WMS and Jam 107XN63, S1XC51, N74XJam 108 and Jam 107XJam 108 were found positively high for NEM.

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