• Title/Summary/Keyword: medical subject headings

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Resources for assigning MeSH IDs to Japanese medical terms

  • Tateisi, Yuka
    • Genomics & Informatics
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    • v.17 no.2
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    • pp.16.1-16.4
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    • 2019
  • Medical Subject Headings (MeSH), a medical thesaurus created by the National Library of Medicine (NLM), is a useful resource for natural language processing (NLP). In this article, the current status of the Japanese version of Medical Subject Headings (MeSH) is reviewed. Online investigation found that Japanese-English dictionaries, which assign MeSH information to applicable terms, but use them for NLP, were found to be difficult to access, due to license restrictions. Here, we investigate an open-source Japanese-English glossary as an alternative method for assigning MeSH IDs to Japanese terms, to obtain preliminary data for NLP proof-of-concept.

Coincidence analysis of keywords and MeSH terms in the Korean Journal of Emergency Medical Services (한국응급구조학회지 게재 논문의 중심 단어 분석(2005년-2011년))

  • Lee, Kyoung-Hee;Ham, Young-Lim
    • The Korean Journal of Emergency Medical Services
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    • v.16 no.2
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    • pp.43-51
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    • 2012
  • Purpose : We try to disclose how much the keywords of the papers from the Korean Journal of Emergency Medical Services with Medical Subject Headings(MeSH) terminologies and to understand the major subjects of the recent emergency medical technology research in Korea from keywords. Methods : We analyzed keywords from 524 articles of the Korean Journal of Emergency Medical Services that were published between 2005 and 2011. We investigated frequently used keywords and what percentages of keywords agree with MeSH terms using the MeSH browser. Results : There were on average 3.2 keywords per article. The most frequent key words were AED, Attitude, Cardiopulmonary Resuscitation, CPR, EMT, EMT students, External Defibrillator, Job satisfaction, Knowledge, 119 EMT in order. The number of terms in precise agreement with MeSH headings was 101(19.3%); 327 terms(62.4%) were not found in the MeSH browser and 96 terms(18.3%) partially matched MeSH terms. Conclusion : Many keywords used in the Korean Journal of Emergency Medical Services did not agree with MeSH terms. We conclude that contribution rules should be using MeSH terms and authors should be educated in the proper use of MeSH terms in their research and subsequent publication.

Comparative Analysis of Index Terms and Social Tags: Medical Subject Headings vs. BibSonomy and Delicious

  • Lee, Danielle H.
    • Journal of the Korean Society for Library and Information Science
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    • v.49 no.2
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    • pp.291-311
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    • 2015
  • This paper demonstrates the comparative analysis of the similarity and difference between Medical Subject Headings (MeSH) and social tags. Both types of metadata have the same purpose - that is, succinctly abstracting content of a given document - but are created from heterogeneous viewpoints. The former MeSH terms show the aspects of publication related professionals, whereas the latter social tags are from the perspectives of general readers. When both types of metadata are assigned to the same publications, do they consist of different nomenclatures reflecting the heterogeneous viewpoints or are they similar, since both metadata types describe the same publications? Social tags are also compared with family terms of MeSH terms in the given MeSH hierarchy, so as to understand the specificity of social tags, related to MeSH terms. Lastly, given the fact that readers assign social tags in casual ways without any restricted vocabulary, we tested how many social tags contain consumer health terms, which are familiar to laypeople. Through these comparisons, we ultimately aim to examine how much the highly controlled publication index reflects general readers' cognitive understandings and stress the necessity of general readers' involvement in the publication indexing process.

The Equality of Key Words of the Journal of Korean Dental Society of Anesthesiology with Medical Subject Headings (MeSH) (2001-2014) (대한치과마취과학회지 게재 논문들의 핵심용어와 MeSH 용어의 일치도)

  • Shim, Youn-Soo;Kim, Ah-Hyeon;You, Yong-Ouk;Kim, Il-Ho;Yu, Song-Yi;Lee, Kwang-Seok;Jeong, Chae-Yul;Kim, Eun-Hee;Maeng, Sun-Woo;An, So-Youn
    • Journal of The Korean Dental Society of Anesthesiology
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    • v.14 no.3
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    • pp.143-149
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    • 2014
  • Background: The purpose of this study was to analyze the equality between key words used in the Journal of Korean Dental Society of Anesthesiology and Medical Subject Headings (MeSH). Methods: A total of 666 English key words in 187 papers (average 3.5 words in a paper) from 2001 to 2014 were eligible for this study. We classified them according to matched, and non-matched terms. After descriptive analysis, we assayed patterns of errors in using MeSH, and reviewed frequently used non-MeSH terms. Results: Fifty nine point six percent (59.6%) of total key words were completely coincident with MeSH terms, 40.39% were not MeSH terms. Conclusions: The results show that the coincidence rate of key words with MeSH terms was at a moderate level. However, there is a need for us to understand MeSH more specifically and accurately. Use of proper key words aligned with the international standards such as MeSH is important to be properly cited. The authors should pay attention and be educated on correct use of MeSH as key words.

open-japanese-mesh: assigning MeSH UIDs to Japanese medical terms via open Japanese-English glossaries

  • Yamada, Ryota;Tatieisi, Yuka
    • Genomics & Informatics
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    • v.18 no.2
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    • pp.22.1-22.3
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    • 2020
  • The Medical Subject Headings (MeSH) thesaurus is a controlled vocabulary for indexing biomedical documents that is used for document retrieval and other natural language processing purposes. However, although the oariginal English MeSH is freely available, its Japanese translation has a restricted license. We attempted to create an open alternative, and for this purpose we made a script for assigning MeSH UIDs to Japanese medical terms using Japanese-English glossaries. From the MeSpEn glossary and MEDUTX dictionary, we generated a 12,457-word Japanese-MeSH dictionary.

Comparison of author key words and Medical Subject Heading terms in the Journal of Korean Society of Dental Hygiene from 2001 to 2015 (한국치위생학회지 게재 논문의 저자 키워드와 MeSH 용어의 비교(창간호~2015년))

  • Kim, Yun-Jeong
    • Journal of Korean society of Dental Hygiene
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    • v.18 no.6
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    • pp.1047-1055
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    • 2018
  • Objectives: The purpose of this study was to compare the author key words and MeSH (Medical Subject Headings) terms in the Journal of Korean Society of Dental Hygiene (JKSDH). Methods: A total of 3,242 author key words from 974 informative articles published from 2001 to 2015 were compared with MeSH terms, according to the criteria of complete coincidence, incomplete coincidence, and complete non-coincidence. Results: The coincidence rate of 564 author key words with MeSH terms was 17.4%. The author key words that appeared most frequently (in descending order) were oral health (41 times), dental hygienists (30 times), dental caries (29 times), and knowledge (29 times). There was a non-coincidence rate of 70.5% for 2,286 author key words with MeSH terms. Conclusions: Many author key words used in the JKSDH did not coincide with MeSH terms. The use of author key words that coincide with MeSH terms is necessary to accomplish the international journal.

The Equality of Keywords of Journal of KAPD with Medical Subject Headings (대한소아치과학회지의 주요어와 의학주제표목의 일치도)

  • Kim, Eunhee;Kim, Ahhyeon;Shim, Younsoo;Ahn, Eunsuk;Jeon, Eunyoung;An, Soyoun
    • Journal of the korean academy of Pediatric Dentistry
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    • v.43 no.2
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    • pp.123-128
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    • 2016
  • The purpose of this study is to analyze the equality between keywords used in the Journal of the Korean Academy of Pediatric Dentistry and medical subject headings (MeSH). A total of 4,353 English keywords in 1,165 papers from 1998 to 2014 were eligible for this study. We classified them according to equality to MeSH. We assayed patterns of errors in using MeSH, and reviewed frequently used non-MeSH terms. 24.9% of total keywords were completely coincident with MeSH terms, 75.1% were not MeSH terms. The results show that the accordance rate of keywords with MeSH terms in the Journal of the Korean Pediatric Dentistry is at a low level. Therefore, there is a need for authors to understand MeSH more specifically and accurately. Use of proper keywords aligned with the international standards such as MeSH is important to be properly cited. Authors should pay attention and be educated on the correct use of MeSH as keywords.

Factors affecting the number of citations in papers published in the Journal of Korean Society of Dental Hygiene (한국치위생학회지 게재논문의 피인용수에 영향을 미친 요인)

  • Jeon, Se-Jeong
    • Journal of Korean society of Dental Hygiene
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    • v.21 no.5
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    • pp.639-644
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    • 2021
  • Objectives: The purpose of this study was to analyze the factors that affected the number of citations for articles published in the Journal of Korean Society of Dental Hygiene based on previous studies. Methods: Information on papers including the number of citations was collected using a web crawling technique. The effect of the number of author keywords, the number of Medical Subject Headings (MeSH) keywords, MeSH match rate, abstract word count and keyword-abstract ratio on the number of citations was analyzed by multiple regression analysis. Results: The use of the MeSH keyword did not have a significant effect on the number of citations. Among the other factors, only the keyword-abstract ratio was statistically significant. Conclusions: Select a topic of constant interest in the field, write the title in detail using colons or asterisks if necessary, and do not repeat the words used in the title in keywords. Select specific keywords deeply related to the topic. In particular, choice words or phrases that are frequently used in the abstract. If the MeSH keyword selection contradicts the previous strategies, boldly give up the MeSH keyword.

A One-Size-Fits-All Indexing Method Does Not Exist: Automatic Selection Based on Meta-Learning

  • Jimeno-Yepes, Antonio;Mork, James G.;Demner-Fushman, Dina;Aronson, Alan R.
    • Journal of Computing Science and Engineering
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    • v.6 no.2
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    • pp.151-160
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    • 2012
  • We present a methodology that automatically selects indexing algorithms for each heading in Medical Subject Headings (MeSH), National Library of Medicine's vocabulary for indexing MEDLINE. While manually comparing indexing methods is manageable with a limited number of MeSH headings, a large number of them make automation of this selection desirable. Results show that this process can be automated, based on previously indexed MEDLINE citations. We find that AdaBoostM1 is better suited to index a group of MeSH hedings named Check Tags, and helps improve the micro F-measure from 0.5385 to 0.7157, and the macro F-measure from 0.4123 to 0.5387 (both p < 0.01).

A Bibliometric Analysis of The Korean Medical Journal (1930-1937) (조선의보(朝鮮醫報)의 계량서지학적 분석)

  • Seong, Heehye;Lee, Hye-Eun
    • Journal of the Korean Society for information Management
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    • v.38 no.3
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    • pp.239-262
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    • 2021
  • The Korean Medical Journal (1930-1937) is the first Korean medical journal published by The Korean Medical Association, which Korean doctors established to resist Japanese medical organizations during the Japanese colonial period. Using the bibliometric research method for The Korean Medical Journal, this study aimed to analyze the journal as follows. First, the study analyzed the subject trends of medical research by extracting the MeSH terms from the title of the articles. Next, the study identified characteristics of authors, type of language used in the papers, publication year and countries of references included in the papers. Also, this study identified the researchers' interests by analyzing the frequency of keywords appearing in the roundtable titles. As a result of the research, infections, pathological symptoms and diseases of the digestive system were studied most often. Most authors belonged to Severance Union Medical College, and internal medicine and general surgery departments had the most authors. Most of the titles and texts of the papers were written in Korean and Chinese characters in combination. Of the 131 papers, only 40 contained abstracts, 22 of which were English abstracts, the most number. The study analyzed 1,103 references in the papers and found that the authors mainly cited the latest journals published in Japan, Germany, and the United States. The topics discussed the most in the roundtable talks were tuberculosis, neurasthenia, and gonorrhea in order. This research examined the history of the publication of The Korean medical journal. Also, it showed that Korean doctors accumulated their academic medical research results and contributed to improving medical conditions.