• Asian Pacific Journal of Cancer Prevention
• /
• v.16 no.3
• /
• pp.1151-1157
• /
• 2015

Human papillomavirus (HPV) is responsible for one of the most frequent sexually transmitted infections. The first phylogenetic analysis was based on a LCR region fragment. Nowadays, 4 variants are known: African (Af-1, Af-2), Asian-American (AA) and European (E). However the existence of sub-lineages of the European variant havs been proposed, specific mutations in the E6 and LCR sequences being possibly related to persistent viral infections. The aim of this study was a phylogenetic study of HPV16 sequences of endocervical samples from C${\acute{o}}$rdoba, in order to detect the circulating lineages and analyze the presence of mutations that could be correlated with malignant disease. The phylogenetic analysis determined that 86% of the samples belonged to the E variant, 7% to AF-1 and the remaining 7% to AF-2. The most frequent mutation in LCR sequences was G7521A, in 80% of the analyzed samples; it affects the binding site of a transcription factor that could contribute to carcinogenesis. In the E6 sequences, the most common mutation was T350G (L83V), detected in 67% of the samples, associated with increased risk of persistent infection. The high detection rate of the European lineage correlated with patterns of human migration. This study emphasizes the importance of recognizing circulating lineages, as well as the detection of mutations associated with high-grade neoplastic lesions that could be correlated to the development of carcinogenic lesions.

• Ocean and Polar Research
• /
• v.28 no.3
• /
• pp.225-236
• /
• 2006

Seagrass meadows are considered as critical habitats for a wide variety of marine organisms in coastal and estuarine ecosystems. In many cases, studies on the spatial/temporal distribution of seagrass have depended on direct observations using SCUBA diving. As an alternative method fur studying seagrass distribution, an application of hydroacoustic technique has been assessed for mapping seagrass distribution in Dongdae Bay, on the south coast of Korea, in September 2005. Data were collected using high frequency transducer (420 kHz split-beam), which was installed with towed body system. The system was linked to DGPS to make goo-referenced data. Additionally, in situ seagrass distribution has been observed using underwater cameras and SCUBA diving at four stations in order to compare with acoustic data. Acoustic survey was conducted along 23 transects with 3-4 blot ship speed. Seagrass beds were vertically limited to depths less than 3.5m and seagrass height ranged between 55 and 90cm at the study sites. Dense seagmss beds were mainly found at the entrance of the bay and at a flat area around the center of the bay. Although the study area was a relatively small, the vertical and spatial distributions of the seagrass were highly variable with bathymetry and region. Considering dominant species, Zostera marina L., preliminary estimation of seagrass biomass with acoustic and direct sampling data was approximately $56.55g/m^2$, and total biomass of 104 tones (coefficient variation: 25.77%) was estimated at the study area. Hydroacoustic method provided valuable information to understand distribution pattern and to estimate seagrass biomass.

• Korean Journal of Fisheries and Aquatic Sciences
• /
• v.32 no.1
• /
• pp.10-17
• /
• 1999

Feeding Habits of Acanthogobius flavimanus collected from the eelgrass bed in Kwangyang Bay from January to December 1994 were studied. A. flavimanus was a carnivore which consumed mainly polychaetes, crabs, shrimps, gammarid amphipods and fishes. Its diets included small quantities of ophiuroids, gastropods, bivalves, caprellid amphipods, isopods and tanaids. It showed ontogenetic changes in feeding habits. Small individuals fed mainly on polychaetes and amphipods. While the consumption of polychaetes and amphipods decreased with increasing fish sin, the consumption of shrimps, crabs and fishes increased. A. flavimanus fed diverse prey organisms in adult stage. The relative proportion of the major prey items changed with season. Although the consumption of polychaetes, shrimps and gammarid amphipods was relatively high in spring and autumn, A. flavimanus fed various prey organisms in nearly equal proportions in the other seasons.

• Journal of Microbiology and Biotechnology
• /
• v.28 no.7
• /
• pp.1209-1216
• /
• 2018

This study aimed to evaluate the antimicrobial activity of 2-phenylethynyl-butyltellurium (PEBT) in Escherichia coli and the relation to its pro-oxidant effect. For this, we carried out the disk diffusion test, minimum inhibitory concentration (MIC) assay, and survival curve analysis. We also measured the level of extracellular reactive oxygen species (ROS), activity of the antioxidant enzymes superoxide dismutase (SOD) and catalase (CAT), and level of non-protein thiols (NPSH). PEBT at 1.28 and 0.128 mg/disk exhibited antimicrobial capability in the disk diffusion test, with an MIC value of 1.92 mg/ml, whereas PEBT at 0.96, 1.92, and 3.84 mg/ml inhibited bacterial growth after a 9-h exposure. PEBT at 3.84, 1.92, and 0.96 mg/ml increased extracellular ROS production, decreased the intracellular NPSH level, and reduced the SOD and CAT activities. Glutathione or ascorbic acid in the medium protected the bacterial cells from the antimicrobial effect of PEBT. In conclusion, PEBT exhibited antimicrobial activity against E. coli, involving the generation of ROS, oxidation of NPSH, and reduction of the antioxidant defenses in the bacterial cells.

• Proceedings of the Korea Society of Environmental Toocicology Conference
• /
• 2003.10a
• /
• pp.27-27
• /
• 2003

Lake Texoma is located on the border of southern Oklahoma and northern Texas. It has 93,000 surface acres, and is a focus of the recreation, and farming industries in the region. There are potential stressors around the Lake Texoma watershed that may cause adverse ecological effects in the lake. System assimilative capacity (SAC) is the ability of abiotic and biotic processes to atteuniate the stressors. SAC Exceeded indicates potential of occuring adverse eco-effects. A number of representative chemical release sites and stressor sources in the surrounding watershed were characterized, and several impact sites having stressors sources, such as being near agriculture, landfills, housing areas, oil production fields and heavy use recreational activity, were selected for surface water, sediment, and groundwater monitoring. A paired reference site, having similar physical characteristics as its impact site, was also chosen based on its proximity to the impact site. Lake water samples were collected at locations identified as marina entrance, gasoline filling station, and boat dock at five marinas selected on Lake Texoma from September 1999 to December 2001. Paired water and sediment samples were also collected. Groundwater samples were collected at about 70 producing monitoring wells. Water quality parameters measured were inorganics (nitrate, nitrite, orthophosphate, ammonia, sulfate, and chloride), dissolved methane, total organic carbon (TOC) (or DOC), volatile organic compounds (VOCs) such as methyl tert-butyl ether (MTBE) and BTEX, and a suite of metals. Biotic communities were evaluated at impact and reference sites. Five basic components were measured; two terrestirial components (plants and bird comminitires) and three aquatic components (benthic inverbrates, litteral-zone fishes, ecosystem attribures). Potential impacts to these comminites were evaluated.

• Journal of Life Science
• /
• v.17 no.4 s.84
• /
• pp.455-461
• /
• 2007

Assessments of population genetic structure and diversity can be of value in formulating management plans for threatened eelgrass(Zostera maim). Using randomly amplified polymorphic DNA markers, we found evidence of significant genetic structure among the populations of eelgrass sampled at three areas(Geojedo, Gaedo, and Jedo). A highly isolated(>100 km apart) population from the Geojedo had a long genetic distance(0.16), whereas the populations from the Gaedo and Jedo(<10 km apart) exhibited far less distance(0.08). The analysis of similarity within population showed that Geojedo was over 70%, which was of lower value than of Gaedo and Jedo. Based on these results, we realized that heterogeneous population was in accordance with geographic separation. This is caused by limited seed dispersal and interrupted gene flow, although the sample size is small.

• Advances in nano research
• /
• v.4 no.3
• /
• pp.167-179
• /
• 2016

The detailed study of acute and sub-acute toxicity of the complex polyvinylpyrrolidon (PVP 20 kDa)-wrapped fullerene $C_{60}$ after intraperitoneal (ip) administration was carried out on adult male Wistar rats. The $LD_{50}$ value of $C_{60}/PVP$ complex was found to be 7, 8 g/kg. In sub-acute study which lasted for 30 days the rats were exposed to daily administration of the complex in the doses of 350 or 700 mg/kg. All animals survived during the study and had no significant changes in clinical signs, organ weight, hematological and biochemical parameters of blood. The electrophysiological properties of myocardium and the excretory function of kidneys remained normal. Histological analysis of liver, kidney and spleen at the end of the study also did not demonstrate toxic alterations. It was thus established that intraperitoneal administration of complex $C_{60}/PVP$ has no toxic effect. These results suggest that $C_{60}/PVP$ has no acute and sub-acute toxicity and is a perspective substance for potential application in biology and medicine.

• Korean Journal of Fisheries and Aquatic Sciences
• /
• v.31 no.5
• /
• pp.665-672
• /
• 1998

Feeding habits of Conger myiaster collected from the eelgrass bed in Kwangyang Bay from January 1994 to December 1994 were studied. C. myiaster was a carnivore which consumed mainly fishes, shrimps and crabs. Its diets included small quantities of amphipods, gastropods, cephalopods, polychaetes, mysids, cumaceans and isopods. It showed ontogenetic changes in feeding habits. Small indinviduals preyed on shrimps, fishes, crabs, and gammarid amphipods in nearly equal proportions. While the portion of the stomach contents attributable to shrimps and gammarid amphipods decreased with increasing fish size, consumption of fishes increased progressively. C. myiaster showed very constant prey selection regardless of prey availability-Especially fishes were heavily selected by this species throughout the year, although availability of fishes was lower than any other prey organisms in the eelgrass bed.

• Korean Journal of Fisheries and Aquatic Sciences
• /
• v.35 no.2
• /
• pp.105-109
• /
• 2002

Seasonal variations of species composition and density of caprellids was accomplished in eelgrass beds around Daedo Island, a south coast of Korea. Sampling was performed monthly using an epifaunal sampler at two stations from June 1996 to May 1997, Caprellids were comprised of 6 species belong to a family Caprellidae, Mean density was 402 ind./$m^2$. The numerically-dominant species were Caprella tsugarensis (216 ind./$m^2$) and C. kroeyeri (129 ind./$m^2$). High density was occurred in the early summer, and lows in autumn and winter. The density of caprellids was correlated with the biomass of the eelgrass. Predation pressure by fish was also correlated with the density of caprellids in spring.

• Journal of Ocean Engineering and Technology
• /
• v.28 no.3
• /
• pp.236-244
• /
• 2014

This study considered a seagrass habitat in order to analyze the characteristics of a marine environment of seagrass located in the Seomjin river estuary, through an analysis of the distribution of the water depth, field observation, and three-dimensional numerical experiments using an EFDC model. The seagrass habitat was usually distributed at D.L(-) 0.5~0.0 m, and was hardly seen in the intertidal zone higher than that range. The distribution of the water temperature was within the range of $7.0{\sim}23.2^{\circ}C$, and the seagrass was demonstrated to have a strong tolerance to changes in the water temperature. In addition, the salinity distribution was found to be 27.2~31.0 psu, with suspended solids of 32.1 mg/L, which were higher than the previous research results (Huh et al., 1998), implying that there may be a reduction in the amount of deposits caused by the suspended solids. As for the sedimentary facies, they were comprised of 62.7% sand, 19.1% silt, and 18.2% clay, indicating that the arenaceous was superior and the sedimentary facies were similar to that of Dadae Bay. According to a numerical experiment, the maximum tidal current was 75 cm/s, while the tidal residual current was 10 cm/s, confirming that it sufficiently adapted to strong tidal currents. The erosion and deposition are predicted to be less than 1.0 cm/year. Thus, it is judged that the resuspension of sediments due to tidal currents and the changes in sedimentary facies are insignificant.