• Title/Summary/Keyword: mapping size

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DNA Fingerprinting of Red Jungle Fowl, Village Chicken and Broilers

  • Mohd-Azmi, M.L.;Ali, A.S.;Kheng, W.K.
    • Asian-Australasian Journal of Animal Sciences
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    • v.13 no.8
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    • pp.1040-1043
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    • 2000
  • The genomic mapping of Red Jungle Fowl (Gallus gallus), local Village Chicken, and broiler was carried out by random amplified polymorphism DNA (RAPD) technique. Two different sets of arbitrary primers were used (Operon OPA01-20 and Genemed GM01-50). All the genomes of the three species of chickens were amplified with OPA01-20 primers. The genomes of the Red Jungle Fowl and local Village Chicken were further amplified with GM01-50 primers. Analysis of the results based on band sharing (BS) and the molecular size of individually amplified DNA fragments showed that Red Jungle Fowl and local Village Chicken shared the species similarity of 66% with Operon primers 01-20, 64% between local Village Chicken and broiler, and 63% when DNA bands between Red Jungle Fowl and broiler were compared. With GM01-50, the BS between Red Jungle Fowl and local village chicken increased to 72%. The results showed that the local village chicken is more closely related to Red Jungle Fowl than to broiler in the genetic distance. On the other hand, broiler is 1% closer in genetic distance to local village chicken than to Red Jungle Fowl. The results also indicated that primers like OPA-7, 8 and 9 can be used as species specific DNA markers for these three species of chickens.

Trefftz Finite Element Method and Cavity Element Formulationfor Plane Elasticity Problems (평면 탄성문제의 트래프츠 유한요소법과 캐비티요소의 구성)

  • Lim, Jangkeun;Song, Kwansup
    • Transactions of the Korean Society of Mechanical Engineers A
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    • v.20 no.1
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    • pp.163-171
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    • 1996
  • For the effective analysis of two dimensional plane problems, Treffiz finite elements and cavity elements have been proposed. These element matrix equaitons were formulated on the basis of hybrid variational principle and Treffiz function sets derived consitstently from the complex theoy of plane elasticity. In order to suggest the accuracy chatacteristics of the proposed Treffiz elements typical plane problems were analyzed and these results were compared with ones obtained by using the conveintional displacement type elements. The accuracy of the proposed elements is less sensitive to the element size and shape than the conventional displacement type elements. These elements, being able to be formed with multi-nodes, give the convenient modeling of an analytic domain. The cavity elements give the comparatively exact values of stress concentration factors of stress intensity factors and can be effectively used for the analysis of mechanical stuctures containing various cavities.

Distinct Band Gap Tunability of Zinc Oxysulfide (ZnOS) Thin Films Synthesized from Thioacetate-Capped ZnO Nanocrystals

  • Lee, Don-Sung;Jeong, Hyun-Dam
    • Applied Science and Convergence Technology
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    • v.23 no.6
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    • pp.376-386
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    • 2014
  • Zinc oxysulfide nanocrystals (ZnOS NCs) were synthesized by forming ZnS phase on a ZnO matrix. ZnO nanocrystals (NCs) with a diameter of 10 nm were synthesized by forced hydrolysis in an organic solvent. As-synthesized ZnO NCs aggregated with each other due to the high surface energy. As acetic acid (AA) was added into the milky suspension of the aggregated ZnO NCs, transparent solution of well dispersed ZnO NCs formed. Finally ZnOS NCs were formed by adding thioacetic acid (TAA) to the transparent solution. The effect of recrystallization on the structural, optical and electrical properties of the ZnOS NCs were studied. The results of UV-vis absorption confirmed the band gap tunability caused by increasing the curing temperature of ZnOS thin films. This may have originated from the larger effective size due to the recrystallization of zinc sulfide (ZnS). From XRD result we identified that ZnOS thin films have a zinc blende crystal structure of ZnS without wurtzite ZnO structure. This is probably due to the small amount of ZnO phases. These assertions were verified through EDS of FE-SEM, XPS and EDS mapping of HR-TEM results; we clearly proved that ZnOS were comprised of ZnS and ZnO phases.

Construction of Structured q-ary LDPC Codes over Small Fields Using Sliding-Window Method

  • Chen, Haiqiang;Liu, Yunyi;Qin, Tuanfa;Yao, Haitao;Tang, Qiuling
    • Journal of Communications and Networks
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    • v.16 no.5
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    • pp.479-484
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    • 2014
  • In this paper, we consider the construction of cyclic and quasi-cyclic structured q-ary low-density parity-check (LDPC) codes over a designated small field. The construction is performed with a pre-defined sliding-window, which actually executes the regular mapping from original field to the targeted field under certain parameters. Compared to the original codes, the new constructed codes can provide better flexibility in choice of code rate, code length and size of field. The constructed codes over small fields with code length from tenths to hundreds perform well with q-ary sum-product decoding algorithm (QSPA) over the additive white Gaussian noise channel and are comparable to the improved spherepacking bound. These codes may found applications in wireless sensor networks (WSN), where the delay and energy are extremely constrained.

Performance Study of Satellite Image Processing on Graphics Processors Unit Using CUDA

  • Jeong, In-Kyu;Hong, Min-Gee;Hahn, Kwang-Soo;Choi, Joonsoo;Kim, Choen
    • Korean Journal of Remote Sensing
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    • v.28 no.6
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    • pp.683-691
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    • 2012
  • High resolution satellite images are now widely used for a variety of mapping applications including photogrammetry, GIS data acquisition and visualization. As the spectral and spatial data size of satellite images increases, a greater processing power is needed to process the images. The solution of these problems is parallel systems. Parallel processing techniques have been developed for improving the performance of image processing along with the development of the computational power. However, conventional CPU-based parallel computing is often not good enough for the demand for computational speed to process the images. The GPU is a good candidate to achieve this goal. Recently GPUs are used in the field of highly complex processing including many loop operations such as mathematical transforms, ray tracing. In this study we proposed a technique for parallel processing of high resolution satellite images using GPU. We implemented a spectral radiometric processing algorithm on Landsat-7 ETM+ imagery using CUDA, a parallel computing architecture developed by NVIDIA for GPU. Also performance of the algorithm on GPU and CPU is compared.

An AFLP-based Linkage Map of Japanese Red Pine (Pinus densiflora) Using Haploid DNA Samples of Megagametophytes from a Single Maternal Tree

  • Kim, Yong-Yul;Choi, Hyung-Soon;Kang, Bum-Yong
    • Molecules and Cells
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    • v.20 no.2
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    • pp.201-209
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    • 2005
  • We have constructed an AFLP-based linkage map of Japanese red pine (Pinus densiflora Siebold et Zucc.) using haploid DNA samples of 96 megagametophytes from a single maternal tree, selection clone Kyungbuk 4. Twenty-eight primer pairs generated a total of 5,780 AFLP fragments. Five hundreds and thirteen fragments were verified as genetic markers with two alleles by their Mendelian segregation. At the linkage criteria LOD 4.0 and maximum recombination fraction 0.25(${\theta}$), a total of 152 markers constituted 25 framework maps for 19 major linkage groups. The maps spanned a total length of 2,341 cM with an average framework marker spacing of 18.4 cM. The estimated genome size was 2,662 cM. With an assumption of equal marker density, 82.2% of the estimated genome would be within 10 cM of one of the 230 linked markers, and 68.1% would be within 10 cM of one of the 152 framework markers. We evaluated map completeness in terms of LOD value, marker density, genome length, and map coverage. The resulting map will provide crucial information for future genomic studies of the Japanese red pine, in particular for QTL mapping of economically important breeding target traits.

High-Speed Generation Technique of Digital holographic Contents based on GPGPU (GPGPU기반의 디지털 홀로그램 콘텐츠의 고속 생성 기법)

  • Lee, Yoon Hyuk;Kim, Dong Wook;Seo, Young Ho
    • Journal of Korea Society of Digital Industry and Information Management
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    • v.9 no.1
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    • pp.151-163
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    • 2013
  • Recently the attention on digital hologram that is regarded as to be the final goal of the 3-dimensional video technology has been increased. Digital hologram is calculated by modeling the interference phenomenon between an object wave and a reference wave. The modeling for digital holograms is called by computer generated hologram (CGH) Generally, CGH requires a very large amount of calculation. So if holograms are generated in real time, high-speed method should be needed. In this paper, we analyzed CGH equation, optimized it for mapping general purpose graphic processing unit (GPGPU), and proposed a optimized CGH calculation technique for GPGPU by resource allocation and various experiments which include block size changing, memory selection, and hologram tiling. The implemented results showed that a digital hologram that has $1,024{\times}1,024$ resolution can be generated during approximately 24ms, using 1K point clouds. In the experiment, we used two GTX 580 GPGPU of nVidia Inc.

Mesoporous Assembly of Layered Titanate with Well-Dispersed Pt Cocatalyst

  • Jung, Tae-Sung;Kim, Tae-Woo;Hwang, Seong-Ju
    • Bulletin of the Korean Chemical Society
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    • v.30 no.2
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    • pp.449-453
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    • 2009
  • A mesoporous assembly of layered titanate with well-dispersed Pt cocatalysts has been synthesized via a restacking of exfoliated titanate nanosheets and a simultaneous adsorption of Pt nanoparticles. According to powder X-ray diffraction analysis, the obtained mesoporous assembly shows amorphous structure corresponding to the disordered stacking of layered titanate crystallites. Field emission-scanning electron microscopy and $N_2$ adsorption-desorption isotherm measurement clearly demonstrate the formation of mesoporous structure with expanded surface area due to the house-of-cards type stacking of the titanate crystallites. From high resolution-transmission electron microscopy and elemental mapping analyses, it is found that Pt nanoparticles with the size of ~2.5 nm are homogeneously dispersed in the mesoporous assembly of layered titanate. In comparison with the protonated titanate, the present mesoporous assembly of layered titanate exhibits better photocatalytic activity for the photodegradation of organic molecules. This finding underscores that the restacking of exfoliated nanosheets is quite useful not only in creating mesoporous structure but also in improving the photocatalytic activity of titanium oxide.

Chemical Differentiation of CS and $N_2H^+$ in Starless Cores

  • Kim, Shinyoung;Lee, Chang Won;Sohn, Jungjoo;Kim, Gwanjeong;Kim, Mi-Ryang
    • The Bulletin of The Korean Astronomical Society
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    • v.39 no.1
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    • pp.62.1-62.1
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    • 2014
  • We present preliminary results on the chemical differentiation of two dense gas tracers CS and $N_2H^+$ in five 'evolved' starless cores, L1544, L1552, L1689B, L694-2 and L1197, using our mapping observations in $C^{34}S$(J=2-1) and $N_2H^+$(J=1-0) with Nobeyama 45-m telescope. We compared the intensity maps of two molecular lines with 850 ${\mu}m$ continuum data which precisely trace the density distribution of the dense cores, finding that all of our targets show the central depletion holes in CS distribution, but the similar distribution in $N_2H^+$ to the one in dust continuum. Our data confirm the claim that CS molecule generally deplete out in the central region in starless cores, while $N_2H^+$ keep abundant as they get evolved. The detailed quantitative analysis on CS depletion in the dense cores, for example, the size of CS depletion area and radial (or gas density) dependence of CS depletion, is underway and will be presented in the meeting.

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A Study on the Crystalline Boron Analysis in CRUD in Spent Fuel Cladding Using EPMA X-ray Images

  • Jung, Yang Hong;Baik, Seung-Je;Jin, Young-Gwan
    • Corrosion Science and Technology
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    • v.19 no.1
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    • pp.1-7
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    • 2020
  • Chalk River Unidentified Deposits (CRUDs) were collected from the Korean pressurized water reactor (PWR) plant (A, B, and C) where the axial offset anomaly (AOA) occurred. AOA, also known as a CRUD-induced power shift, is one of the key issues in maintaining stable PWR plant operations. CRUDs were sampled from spent nuclear fuel rods and analyzed using an electron probe micro-analyzer (EPMA). This paper describes the characteristics of boron-deposits from the CRUDs sampled from twice-burnt assemblies from the Korean PWR. The primary coolant of a PWR contains boron and lithium. It is known that boron deposition occurs in a thick CRUD layer under substantial sub-cooled nucleate boiling (SNB). The results of this study are summarized as follows. Boron was not found at the locations where the existence was confirmed in simulated CRUDs, in other words, the cladding and CRUD boundaries. Nevertheless, we clearly observed the presence of boron and confirmed that boron existed as a lump in crystalline form. In addition, the study confirmed that CRUD existed in a crystal form with a unique size of about 10 ㎛.