• 제목/요약/키워드: mRNA expression pattern

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Poly-N-acetyllactosamine (poly-LacNAc) 합성에 관여하는 돼지 β-1,3-N-acetylglucosaminyltransferase I (pB3GNT1) 유전자 동정 (Identification of the Pig β-1,3-N-acetylglucosaminyltransferase 1 (pB3GNT1) that is Involved in Poly-N-acetyllactosamine (poly-LacNAc) Synthesis)

  • 김지윤;황환진;정학재;신이치 호치;박미령;변승준;오건봉;양현;김경운
    • 생명과학회지
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    • 제28권4호
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    • pp.389-397
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    • 2018
  • 당 단백질에 붙어 있는 당사슬 구조는 형질전환 돼지 유즙으로 분비되는 의약용 단백질의 생물학적 활성, 안정성 그리고 안전성에 영향을 줄 수 있다. 형질전환 동물을 이용한 치료용 당 단백질 생산은 유선 세포에서 이루어지는 당사슬 부가능력에 의해 제한되며, 균일한 당사슬 형태를 가지는 당 단백질 생산은 도전 과제로 남아있다. ${\beta}$-1,3-N-acetylglucosaminylatransferase1 (B3GNT1) 유전자는 N-아세틸글루코사민에 갈락토오스 잔기를 부착시키는 단백질 당화기작에 중요한 효소이지만, 돼지 당 전이효소에 대한 정보는 매우 제한적이다. 따라서, 돼지 B3GNT1 (pB3GNT1) 유전자를 클로닝하고 N-아세틸글루코사민에 갈락토오스 잔기를 부착시키는 기능적 특성을 조사하였다. 몇가지 다른 프라이머를 사용하여 전체 전사영역(ORF)을 함유하는 부분적인 pB3GNT1 mRNA 염기서열을 간 조직으로부터 분리하였다. 클로닝 된 pB3GNT1의 ORF는 1,248개의 뉴클레오티드를 가지며, 415개 아미노산 잔기로 구성되어 있었다. pB3GNT1 유전자의 장기별 발현특성은 성돈 및 자돈의 여러 기관에서 분석하였다. pB3GNT1 mRNA 발현 수준은 심장, 소장 보다는 근육에서 높았지만 폐에서는 낮았다. pB3GNT1의 기능적 특성 분석을 위해 돼지 신장 세포주(PK-15)에서 pB3GNT1 유전자의 안정적인 발현을 확립하였다. 그 결과, PK-15 세포에서 pB3GNT1 발현에 의한 당화 패턴은 총 시알산 증가에는 영향을 미치지 않지만, poly-N-아세틸글루코사민은 증가하는 것으로 나타났다. 본 연구는 생물반응기로 형질전환 돼지를 이용할 때 희망하는 당사슬을 부가하여 치료 가능성을 높이며 개선된 활성을 나타내는 당단백질 생산에 도움이 될 것이다.

Effects of exhaustive exercise on ER Stress of skeletal muscle and adipose tissue in rats

  • In, Dae-Hyeong;Woo, Sang-Koo;Kim, Ki-Hoon
    • 운동영양학회지
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    • 제17권2호
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    • pp.35-42
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    • 2013
  • The purpose of this study was to identify the effects of gene expression of endoplasmic reticulum (ER) stress in skeletal muscle and adipose tissue on acute exhaustive exercise. Thirty-five Sparague Dawley male rats were divided into a control group (CON, n = 7) and a exhaustive exercise group (n = 28), immediately after exhaustive exercise group (n = 7), after 30 minutes exhaustive exercise group (n = 7), after 60 minutes exhaustive exercise group (n = 7), after 180 minutes exhaustive exercise group (n = 7). As a result, changes in the composition of the blood serum triglyceride concentration increased significantly in immediately after exhaustive exercise group, On the contrary, blood glucose showed a significantly decreased (p < .05). Homeostasis of energy metabolism due to exhaustive exercise as a result of the mechanism of action of skeletal muscle in the glycogenolysis and absorption, which indicates that the process of means. On the other hand, a result of examining changes in endoplasmic reticulum stress-related proteins in skeletal muscle and adipose tissue, JNK1 except in skeletal muscle BiP, ATF4, CHOP, GRP78 mRNA increased significantly immediately after exercise, and after 30 minutes returned to normal levels that could be confirmed (p < .05). BiP mRNA in adipose tissue show a similar pattern and skeletal muscle increased significantly immediately after exercise, but other changes in the specificity of the endoplasmic reticulum stress-related proteins also did not appear. In conclusion, Exercise applies and exercise training duration and exercise intensity as well as research on the interaction of the endoplasmic reticulum stress-related genes should be study continuously, to be more clear.

상아모세포의 I 형 아교질에 대한 부착 (THE ADHESION OF ODONTOBLAST TO TYPE I COLLAGEN)

  • 안명기;정태성;김신
    • 대한소아치과학회지
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    • 제37권3호
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    • pp.308-316
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    • 2010
  • 상아모세포는 부착분자들을 이용하여 기질에 부착하는 세포이며, 인테그린과 같은 부착분자들이 일련의 세포와 세포외기질을 인지하는 신호전달분자로 알려져 있다. 본 연구의 목적은 상아모세포(MDPC-23 세포)와 I형 아교질과의 상호작용과 TGF-${\beta}1$과 TNF-${\alpha}$가 세포부착분자의 발현에 미치는 영향을 알아보기 위해 시행하였다. 본 연구에서 MDPC-23 세포는 농도의존적으로 I형 아교질에 부착했으며, 면역형광염색법에서 MDPC-23 세포가 아교질에 부착할 때, 국소부착점에서 인테그린 ${\alpha}1$, ${\alpha}2$, CD44, FAK 그리고 paxillin의 발현양상을 관찰할 수 있었다. 싸이토카인 TGF-${\beta}1$은 MDPC-23 세포의 아교질에 대한 부착성 및 인테그린 ${\alpha}1$, ${\alpha}2$와 chondroitin sulfate의 발현을 증가시켰으며, RT-PCR의 결과에서는 인테그린 ${\alpha}1$의 mRNA의 양이 TGF-${\beta}1$에 의해서 증가되었음을 확인하였다. 결론적으로 MDPC-23 세포는 아교질에 부착 친화성을 갖고 있으며, 부착 시에 인테그린 ${\alpha}1$, ${\alpha}2$와 CD44 그리고 chondroitin sulfate와 같은 부착분자들이 관여한다. 그리고 TGF-${\beta}1$은 인테그린 ${\alpha}1$, ${\alpha}2$ 그리고 chondroitin sulfate와 같은 부착분자의 발현을 증가시켰다.

Identification of an Embryonic Growth Factor IGF-II from the Central Nervous System of the Teleost, Flounder, and Its Expressions in Adult Tissues

  • Kim, Dong-Soo;Kim, Young-Tae
    • Journal of Microbiology and Biotechnology
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    • 제9권1호
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    • pp.113-118
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    • 1999
  • The insulin-like growth factor (IGF) is found in all vertebrates and its type-II molecule is regarded as a fundamental embryonic growth factor during development. We have firstly identified, in this study, a cDNA clone corresponding to IGF-II (flIGF-II) from the adult brain of the teleost, Paralichthys olivaceus. We also examined the tissue expression of flIGF-II in several adult tissues by RT-PCR. The flIGF-II cDNA contained a complete ORF consisting of 215 amino acids and one stop codon. Its molecular characteristics appear to be similar to the previously identified IGF-II molecules, in which a common primary structure exhibiting B, C, A, D, and E domains is evidently observed. This cDNA clone seems to be cleaved at $Ala_{52}$ for the $NH_2$-end signal peptide and appears to produce a 98 amino acid-long E-peptide from the $Arg^{118}$. The functional B-D domain regions, therefore, include 65 amino acids and is able to encode a 7.4-kDa protein. The most prominent structural difference between IGF-I and IGF-II was that the D domain of IGF-II exhibits a two-codon-deleted pattern compared to the 8 amino acid-containing IGF-I. The insulin family signature in the A domain and six cysteins forming three disulfide bridges between the B and A domains were evolutionary-conserved from teleosts to mammalian IGF-II. Interestingly, the E-peptide region appears to provide a distinct hallmark between teleosts in amino acid composition. The flIGF-II shows 85.1% of sequence identity to salmon and trout, 90.6% to tilapia, and 98.4% to perch in amino acid level. In tissue expressions of IGF-II, it is very likely that flIGF-II has a significant expression in the adult brain. However, liver seems to be the main source for IGF-II production, and relatively low signals were observed in the adult muscle and kidney. Taken together, it would be concluded that the functional region for IGF-II mRNA is highly similar in phylogeny and is evolutionary, conserved as a mediator for the growth of vertebrates.

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Differential Expression of Osteonectin in the Rat Developing Molars

  • Kim, Jung-Ha;Yoo, Hong-Il;Oh, Min-Hee;Yang, So-Young;Kim, Min-Seok;Kim, Sun-Hun
    • International Journal of Oral Biology
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    • 제37권2호
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    • pp.51-56
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    • 2012
  • Tooth development involves bud, cap, bell and hard tissue formation stages, each of which is tightly controlled by regulatory molecules. The aim of this study was to identify genes that are differentially expressed during dental hard tissue differentiation. Sprague-Dawley rats at postnatal days 3, 6 and 9 were used in the analysis. Differential display RT-PCR (DD-PCR) was used to screen differentially expressed genes between the 2nd (root formation stage, during mineralization) and 3rd (cap stage, before mineralization) molar germs at postnatal day 9. The DNA detected in the 2nd molar germs showed homology to osteonectin only (GenBank accession no. NM_012656.1). The level of osteonectin mRNA expression was much higher in the 2nd molar germs than in the 3rd molar germs and was found to increase in a time-dependent manner from the early bell stage to the root formation stage in the 2nd molar germs. The pattern of osteonectin protein expression was consistent with these RT-PCR results. Osteonectin protein was found by immunofluorescent analysis to localize in odontoblasts and preodontoblasts rather than the dentin matrix itself. Further studies are needed to validate the involvement of osteonectin in mineralization and root formation.

Connexin32 inhibits gastric carcinogenesis through cell cycle arrest and altered expression of p21Cip1 and p27Kip1

  • Jee, Hyang;Lee, Su-Hyung;Park, Jun-Won;Lee, Bo-Ram;Nam, Ki-Taek;Kim, Dae-Yong
    • BMB Reports
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    • 제46권1호
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    • pp.25-30
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    • 2013
  • Gap junctions and their structural proteins, connexins (Cxs), have been implicated in carcinogenesis. To explore the involvement of Cx32 in gastric carcinogenesis, immunochemical analysis of Cx32 and proliferation marker Ki67 using tissue-microarrayed human gastric cancer and normal tissues was performed. In addition, after Cx32 overexpression in the human gastric cancer cell line AGS, cell proliferation, cell cycle analyses, and $p21^{Cip1}$ and $p27^{Kip1}$ expression levels were examined by bromodeoxyuridine assay, flow cytometry, real-time RT-PCR, and western blotting. Immunohistochemical study noted a strong inverse correlation between Cx32 and Ki67 expression pattern as well as their location. In vitro, overexpression of Cx32 in AGS cells inhibited cell proliferation significantly. $G^1$ arrest, up-regulation of cell cycle-regulatory proteins $p21^{Cip1}$ and $p27^{Kip1}$ was also found at both mRNA and protein levels. Taken together, Cx32 plays some roles in gastric cancer development by inhibiting gastric cancer cell proliferation through cell cycle arrest and cell cycle regulatory proteins.

일반메밀과 쓴메밀 종실 추출물의 RAW 264.7 대식세포에서 LPS에 의해 유도되는 iNOS 및 염증성 사이토카인 발현 저해를 통한 항염증 효과 비교 (Anti-inflammatory effects of seed ethanolic extracts of the common buckwheat and tartary buckwheat are mediated through the suppression of inducible nitric oxide synthase and pro-inflammatory cytokines in LPS-induced RAW 264.7 macrophage cells)

  • 김수정;손황배;이경태;신지선;김수연;남정환;홍수영;서종택;장동칠;김율호
    • 한국식품과학회지
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    • 제51권6호
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    • pp.565-575
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    • 2019
  • 메밀은 전 세계적으로 알곡, 싹, 차 등 다양한 형태로 이용되고 있으며, 주요재배종으로는 일반메밀과 쓴메밀이 있다. 본 연구는 일반메밀과 쓴메밀 종실 추출물을 대상으로 항산화 및 항염증 활성 효과를 평가하였다. 루틴 함량은 쓴메밀 추출물이 일반메밀 추출물보다 65-78배 높았으며, 퀘세틴은 쓴메밀 추출물에서만 검출되었다. 플라보노이드 및 폴리페놀 함량도 쓴메밀 추출물이 1.8-2.0배 높았다. 쓴메밀 추출물은 6.25-400 ㎍/mL 범위의 농도로 세포독성을 평가하였을 때 세포독성은 관찰되지 않았다. 또한, 세포 내 NO 생성을 유의적으로 감소시키는 것으로 나타났다. 염증성 NO 생성과 관련된 유전자 iNOS 단백질과 mRNA 발현을 확인한 결과, 쓴메밀 추출물에서만 iNOS 단백질과 mRNA 발현이 감소되었다. 염증성 사이토카인 생성억제 효과에서, TNF-α와 IL-1β의 경우 쓴메밀과 일반메밀 추출물 모두에서 생성억제 효과가 확인되었으며, IL-6의 경우 일반메밀 추출물은 생성억제 효과가 없었으나 쓴메밀 추출물에서는 그 효과가 인정되었다. 염증성 사이토카인의 mRNA 발현을 확인한 결과, 일반메밀과 쓴메밀 추출물에 의한 mRNA 발현이 감소되었으며, 쓴메밀 추출물의 억제효과가 더욱 우수하였다. 이러한 결과들을 고려하면 루틴 함량과 항염증 효과와는 밀접한 관계가 있으며, 루틴 함량이 높은 쓴메밀이 항염증 식의약 소재 개발에 활용 가능성이 높을 것으로 판단된다.

Characterization of Invading Glioma Cells Using Molecular Analysis of Leading-Edge Tissue

  • Kim, Cheol-Soo;Jung, Shin;Jung, Tae-Young;Jang, Woo-Youl;Sun, Heung-Suk;Ryu, Hyang-Hwa
    • Journal of Korean Neurosurgical Society
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    • 제50권3호
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    • pp.157-165
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    • 2011
  • Objective : We have introduced a method of characterization of invading glioma cells by using molecular analysis of marginal invading tumor cells and molecular profiles of glioma tumor margin. Methods : Each of tumor core and marginal tissues was obtained in 22 glioma patients. Tumor core cells and marginal cells from each glial tumor were collected by laser capture microdissection or intraoperative microdissection under the operating microscope. Expression of MMP-2, MMP-9, CD44 and RHAMM mRNA by invading glioma cells compared with tumor core was confirmed by realtime-PCR of twenty-four glioma specimens. Clinical data also were reviewed for invasion and recurrence pattern of the gliomas radiologically and invasive rim pattern microscopically. Results : Overall results of the molecular analysis showed that relative overexpression of MMP-2, MMP-9 and RHAMM were noted at the invasive edge of human glioma specimens comparing to the tumor core but CD44 was highly expressed in the tumor core comparing to the margin. High marginal expression of MMP-2 and MMP-9 were noted in poorly ill-defined margin on the pathological finding. High marginal expression of CD44 and MMP-2 were demonstrated in the midline cross group on the radiological review, and that of RHAMM and MMP-2 were showed in the aggressive recurrence group. High expression of MMP-2 seems to be involved in the various invasion-related phenomenons. Conclusion : Up-regulation of MMP-2, MMP-9, CD44 and RHAMM was noted in invasive edge of gliomas according to the various clinical situations.

Molecular Characterization and Expression Pattern of Na+-K+-2Cl- Cotransporter 2 (NKCC2) in the Intestine of Starry Flounder Platichthys stellatus after Bacterial Challenge

  • Kim, Yi Kyung;Nam, Yoon Kwon
    • Fisheries and Aquatic Sciences
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    • 제18권2호
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    • pp.173-181
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    • 2015
  • We identified the $Na^+-K^+-2Cl^-$ cotransporter 2 (NKCC2) cDNA isoform from starry flounder, Platichthys stellate. The NKCC2 cDNA encoded a polypeptide of 1,043 amino acids representing 12 putative transmembrane domains based on the bioinformatic topology prediction. In addition, starry flounder NKCC2 possessed highly conserved residues within transmembrane domain 4, known as an essential site for its function. End-point reverse transcription-polymerase chain reaction analysis revealed that the NKCC2 transcript was moderately expressed only in the anterior and posterior intestines and the rectum. The NKCC2 mRNA level in the rectum, but not in other segments, was significantly induced 3 days post Streptococcus parauberis challenge, indicating that excess salt may be transported into the rectum. Taken together, our data indicate that an S. parauberis infection could tip the intestinal fluid balance in favor of fluid accumulation, indicating that bacterial pathogens can interfere with intestinal osmotic balance and normal mucosal immune homeostasis.

Characterization of the BolA Homolog IbaG: A New Gene Involved in Acid Resistance

  • Guinote, Ines Batista;Moreira, Ricardo Neves;Freire, Patrick;Arraiano, Cecilia Maria
    • Journal of Microbiology and Biotechnology
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    • 제22권4호
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    • pp.484-493
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    • 2012
  • BolA protein homologs are widely distributed in nature. In this report, we have studied for the first time YrbA, the only BolA homolog present in Escherichia coli, which we have renamed ibaG. We have constructed single and multiple ibaG mutants, and overexpressed ibaG in wild-type strains, in order to characterize this gene. The ibaG phenotypes are different from the bolA-associated round morphologies or growth profiles. Interestingly, ibaG and bolA single-and double-deletion mutants grow faster and have higher viabilities in rich media, whereas the overexpressed strains are significantly growth impaired. However, the mutant strains have lower viabilities than the wild type in the late stationary phase, indicating that both bolA and ibaG are important for survival in difficult growth conditions. bolA, as a transcription factor, binds to some promoters, but ibaG does not interact with the same DNA regions. We have determined that ibaG is transcribed in an operon with the murA gene, involved in the synthesis of peptidoglycan precursors. ibaG was also seen to change its mRNA expression pattern in response to acidic stress. ibaG may thus represent a new gene involved in cell resistance against acid stress.