• Mycobiology
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• v.51 no.3
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• pp.122-138
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• 2023

Elsinoë are plant pathogenic fungi that cause scabs, spotted anthracnose, and some morphological distortions on various plants, including woody plants, economically important crops, and ornamental plants. Taxonomical reexamination of Elsinoë species in Japan has not yet been conducted based on the modern species criteria. In this study, several Japanese isolates were reexamine based on the morphological and molecular-phylogenetic analysis of the internal transcribed spacer region (ITS), large subunit gene (LSU)m and protein-coding gene such as RNA polymerase II subunit (rpb2) and Translation elongation factor 1-alpha (tef). Japanese isolates were divided into four clades and three new species, Elsinoë hydrangeae, E. sumire, and E. tanashiensis were proposed. One species, Sphaceloma akebiae, was transferred to the genus Elsinoë.

• Mycobiology
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• v.51 no.1
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• pp.16-25
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• 2023

Lecanora is one of the largest genera of lichens worldwide. These lichens can be easily seen, and are commonly found on trees and rocks. Most Korean Lecanora species belong to the Lecanora subfusca group, which has well-defined superficial thallus, red-brown apothecia, and soredia. The new species of L. neobarkmaniana grows on rocks, farinose soredia coalescing, usually covering the whole thallus, and containing atranorin and zeorin. We used internal transcribed spacer (ITS) and mitochondrial small subunit (mtSSU) sequence data to identify the phylogenetic relationship across Lecanora sequence data and found the species to form different clades. In this study, we reported some interesting findings and described the genetic relationship with other sorediate Lecanora species and the characteristics of the new species. An identification key for the Korean sorediate Lecanora species is given.

• The Korean Journal of Mycology
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• v.50 no.4
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• pp.361-365
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• 2022

Here, Podospora leporina was isolated and cultured from Cypripedium guttatum Sw. (spotted lady's slipper), which was designated as an endangered wildlife class 1 by the Ministry of Environment. Further, Podospora sp., which is found in Calanthe discolor Lindl. (Japanese hardy orchid) root is recorded as an endophytic fungus in Jeju Island, Korea. However, there is no existing record of Podospora spp. Thus, in this study, we analyzed the morphological characteristics and two molecular markers, internal transcribed spacer (ITS) and large ribosomal subunit (LSU), of P. leporina and compared these data with other relative species. Consequently, this endophytic fungal species was confirmed as an unrecorded species in Korea, so we presented cultural characteristics and microstructures, such as the conidia of P. leporina.

• The Korean Journal of Mycology
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• v.50 no.2
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• pp.125-130
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• 2022

The powdery mildew found on Magnolia kobus was recorded as Microsphaera alni for the first time in Korea in 1975. After splitting M. alni into several distinct species, this mildew was regarded as Microsphaera magnifica, now Erysiphe magnifica. Since E. magnifica is known to be a North American species, the powdery mildew found on M. kobus in Korea was studied to clarify its identity. Based on morphological characteristics and sequencing results of the internal transcribed spacer and large subunit rDNA gene, the powdery mildew found on M. kobus in Korea was identified as Erysiphe magnoliicola.

• The Korean Journal of Mycology
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• v.51 no.4
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• pp.313-334
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• 2023

Mt. Taebaeksan extends from Gangwon-do Province (Taebaek-si, Youngwon-gu, and Jeongseon-gun) to Gyeongsangbuk-do Province (Bongwha-gun), South Korea. Indigenous fungi present in the park were investigated between 2019 and 2022. All collected specimens were identified to the species level based on their morphological characteristics and molecular phylogenetic analysis using sequences from the internal transcribed spacer (ITS) and large subunit (LSU) of ribosomal DNA. Among them, 17 species-Cyanosporus bifarius, Dacryobolus angiospermarum, Entoloma sericeum, Flammulina rossica, Fuscopostia leucomallella, Homophron helvolescens, Hygrophorus queletii, Hymenochaete huangshanensis, Inocybe albodiscoides, Lactarius fulvihirtipes, Lepiota ignivolvata, Physisporinus eminens, Ramaria gracilis, Russula albolutea, Russula cremicolor, Stropharia lignicola, and Tengioboletus subglutinosus-were newly recorded macromycota in Korea.

• The Korean Journal of Mycology
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• v.51 no.4
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• pp.441-446
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• 2023

Bamboo is host to diverse range of fungi, however, research on bambusicolous fungi remains insignificant in Korea. The genus Apiospora is prevalent in various environments, particularly as endophytic fungi in Poaceae, to which bamboo belongs. In this study, endophytic fungi were isolated from stems of Pseudosasa japonica collected from Gongjusi, Korea. To identify these endophytic fungi, we observed morphological characteristics and conducted phylogenetic analysis using internal transcribed spacer (ITS), large subunit ribosomal DNA (LSU), and β-tubulin (TUB2) DNA, identifying and describing an unrecorded fungus, Apiospora pseudosinensis.

• The Korean Journal of Mycology
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• v.52 no.2
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• pp.135-143
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• 2024

Lindera obtusiloba Blume, a shrub prevalent in the understory vegetation of the deciduous forests in East Asia and Korea, is known for its pharmacological properties, including antioxidant, anti-allergic, and anti-inflammatory activities. Endophytic fungi were isolated from surface-sterilized twigs and leaves of L. obtusiloba collected from Samcheok-si and Jecheon-si in Korea. The fungal strains were identified based on their morphological characteristics and molecular analyses using DNA markers such as internal transcribed spacer, large subunit rDNA, β-tubulin, chitin synthase, and glyceraldehyde-3-phosphate dehydrogenase. Here, we report two new records of endophytic fungi isolated from L. obtusiloba in Korea: Colletotrichum citricola and Valsa ceratophora. These results enhance our understanding of the diversity of endophytic fungi in L. obtusiloba and contribute to enhancing our knowledge of fungal biodiversity in Korea.

• The Plant Pathology Journal
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• v.21 no.3
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• pp.229-236
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• 2005

Molecular profIles of PCR-RFLP and sequence analysis of internal transcribed spacer (ITS) regions of rDNA were compared between morphologically distinguishable species of Trichoderma isolated from substrates of oyster mushroom in Korea, T. atroviride, T. citrinoviride, T. harzianum, T. longibrachiatum, T. virens, and two unidentified species, Trichoderma sp. 1 and 2. PCR­RFLP analysis divided the Trichoderma spp. into six RFLP groups, A, B, C, D, E, and F. The RFLP groups were generally agreed with described morphological species, except that the RFLP group A containing the two unidentified species. A neighbor-joining tree based on ITS sequences well supported RFLP groups observed by RFLP analysis of ITS regions of rDNA. Additionally, the two unidentified species, Trichoderma sp. 1 and 2, which could not be distinguished by PCR­RFLP analysis, were separated in sequence analysis of ITS regions of rDNA.

• Korean Journal of Medicinal Crop Science
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• v.18 no.1
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• pp.40-45
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• 2010

The application of PCR analysis on the herbal medicine Moutan Cortex (Paeonia suffruticosa Andrews) was evaluated by the comparison of the genetic relationship based on the DNA sequence with Paeoniae Radix (Paeonia lactiflora Pallas) following development of specific primers. Moutan Cortex and Paeoniae Radix were distinguished through the PCR analysis based on the internal transcribed spacer (ITS-PCR) from nuclear ribosomal DNA region. The 294 bp PCR products both of Moutan Cortex and Paeoniae Radix was amplified by MIF1 and MIR1. And a Moutan Cortex specific 225 bp PCR amplification product was amplified by MIF2 and MIR1 primers. The 225 bp sequence could be successfully amplified from Mortan Cortex of dried herbal preparations. PCR analysis based on ITS (ITS-PCR) may be an efficient tool for the discrimination of Moutan Cortex.

• Microbiology and Biotechnology Letters
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• v.48 no.4
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• pp.463-470
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• 2020

The JS18 strain was isolated from an old tree forest and produced extracellular enzymes that decolorize synthetic melanin. Phylogenetic analysis, based on the internal transcribed spacer (ITS) sequence, indicate that JS18 belongs to the Trametes velutina species. JS18 demonstrated laccase activity but no manganese peroxidase or lignin peroxidase activity. Batch culture indicated that the melanin decolorization activity of JS18 strain originated from the laccase. Syringic acid and CuSO4 induced maximum laccase production, yielding 98 U/ml laccase activity after cultivation for 7 days at 25℃. T. velutina secretes an extracellular laccase in GYP medium, and this enzyme was purified using (NH4)2SO4 precipitation, Hi-trap Q Sepharose columns and gel filtration. The molecular weight of the purified enzyme was estimated to be 67 kDa using sodium dodecyl sulfate polyacrylamide gel electrophoresis. This enzyme produced 80% of its melanin decolorization activity within the first 24 h of evaluation in the presence of 1-hydroxybenzotriazole (HBT), while only about 4% of the melanin was decolorized in the absence of the mediator. The greatest decolorization was observed at 1.5 mM/l HBT, which decolorized 81% of the melanin within the first 24 h. The optimum pH and temperature for this decolorization were found to be 5.0 and 37℃, respectively. Our results suggest the possibility of applying HBT induced T. velutina JS18 laccase-catalyzed melanin decolorization.