• Title/Summary/Keyword: identification rate

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Identification and Heterologous Expression of a ${\Delta}4$-Fatty Acid Desaturase Gene from Isochrysis sphaerica

  • Guo, Bing;Jiang, Mulan;Wan, Xia;Gong, Yangmin;Liang, Zhuo;Hu, Chuanjiong
    • Journal of Microbiology and Biotechnology
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    • v.23 no.10
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    • pp.1413-1421
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    • 2013
  • The marine microalga Isochrysis sphaerica is rich in the very-long-chain polyunsaturated fatty acids, including eicosapentaenoic acid (EPA, $C20:5{\omega}-3$) and docosahexaenoic acid (DHA, $C22:6{\omega}-3$) that are important to human health. Here, we report a functional characterization of a ${\Delta}4$-fatty acid desaturase gene (FAD4) from I. sphaerica. IsFAD4 contains a 1,284 bp open reading frame encoding a 427 amino acid polypeptide. The deduced amino sequence comprises three conserved histidine motifs and a cytochrome b5 domain at its N-terminus. Phylogenetic analysis indicated that IsFad4 formed a unique Isochrysis clade distinct from the counterparts of other eukaryotes. Heterologous expression of IsFAD4 in Pichia pastoris showed that IsFad4 was able to desaturate docosapentaenoic acid (DPA) to form DHA, and the rate of converting DPA to DHA was 79.8%. These results throw light on the potential industrial production of specific polyunsaturated fatty acids through IsFAD4 transgenic yeast or oil crops.

Design and Implementation of a RFID Sensor Network Design System (RFID 센서 네트워크 설계 시스템의 설계 및 구현)

  • Soon, Nam-Soon;Yeo, Myung-Ho;Yoo, Jae-Soo
    • Proceedings of the Korea Contents Association Conference
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    • 2009.05a
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    • pp.505-509
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    • 2009
  • Recently, many researchers have studied on RFID with the rapid development of RFID technologies. RFID adapts to many applications. A lot of readers may be deployed in some applications. The incorrect deployment of RFID readers occurs reader-to-reader interferences in many applications using RFID technologies. It causes the significant degradation of the RFID recognition rate. Therefore, it is very important to appropriately deploy the RFID readers in terms of costs and system performance. In this paper, we propose a novel RFID sensor network design system with the minimal RFID readers to cover whole regions when an arbitrary blueprint is given.

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Throughput Analysis of ASO-TDMA in Multi-hop Maritime Communication Network (다중-홉 선박 통신 네트워크를 위한 애드혹 자율 구성 TDMA 방식의 수율 성능 분석)

  • Cho, Kumin;Yun, Changho;Kang, Chung G.
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.37B no.9
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    • pp.741-749
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    • 2012
  • Ad Hoc Self-Organizing TDMA (ASO-TDMA) has been proposed as a specification to support the multi-hop data communication service for ships over VHF band. It allows for organizing a multi-hop ad-hoc network in a distributed manner by sharing the radio resources among the ships navigating along the route. In this paper, Markov chain analysis is given to provide the average throughput performance for ASO-TDMA protocol Furthermore, the analytical results are verified with computer simulation, which shows that there exists the optimal transmission rate to maximize the average throughput as the subframe size and the number of ships are varying in each hop region.

WETTING PROPERTIES AND INTERFACIAL REACTIONS OF INDIUM SOLDER

  • Kim, Dae-Gon;Lee, Chang-Youl;Hong, Tae-Whan;Jung, Seung-Boo
    • Proceedings of the KWS Conference
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    • 2002.10a
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    • pp.475-480
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    • 2002
  • The reliability of the solder joint is affected by type and extent of the interfacial reaction between solder and substrates. Therefore, understanding of intermetallic compounds produced by soldering in electronic packaging is essential. In-based alloys have been favored bonding devices that demand low soldering temperatures. For photonic and fiber optics packaging, m-based solders have become increasingly attractive as a soldering material candidate due to its ductility. In the present work, the interfacial reactions between indium solder and bare Cu Substrate are investigated. For the identification of intermetallic compounds, both Scanning Electron Microscopy(SEM) and X-Ray Diffraction(XRD) were employed. Experimental results showed that the intermetallic compounds, such as Cu$_{11}$In$_{9}$ was observed for bare Cu substrate. Additionally, the growth rate of these intermetallic compounds was increased with the reaction temperature and time. We found that the growth of the intermetallic compound follows the parabolic law, which indicates that the growth is diffusion-controlled.d.

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A EMG Signal Processing Algorithm for SMUAP Pattern Classification (SMUAP의 패턴분류를 위한 근 신호처리 알고리듬)

  • Lee, Jin;Jo, Il-Jun;Byun, Youn-Shik;Hong, Woan-Hue;Kim, Sung-Hwan
    • Journal of the Korean Institute of Telematics and Electronics
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    • v.26 no.7
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    • pp.106-111
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    • 1989
  • A new EMG signal processing algorithm for SMUAP pattern classification is proposed. It checks the combination and regularity of ISI using a spike counter as a decision making routine, and performs SMUAP waveform alignment in frequency domain and selects spikes through FIR filtering. As a result, with the EMG signals recorded during 5 seconds at 10-50% MVC force level, the SMUAP ranged from five to nine units were classified and identification rate is greater than 55 percent using a concentric needle electrode. In the IBM PC/AT the processing time typically required 2 minutes.

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A Goods Load Simulator for Optimum RFID Distribution (무선 주파수 식별 적용을 위한 물류 적재 시뮬레이터 설계)

  • Choi, Byeong-Jin;Park, Chang-Hyeon;Seong, Won-Mo
    • Journal of the Institute of Electronics Engineers of Korea CI
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    • v.47 no.4
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    • pp.118-124
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    • 2010
  • We proposed a goods load simulator for optimum RFID distribution, which includes experiment process modeling guidelines for stable RFID scan rate, efficient cost-reduction of RFID application or even speedy management of RFID field. We show verification of this simulator using field test of distribution, and the proposed simulator has better performance than the classic method, and demonstrate the proposed is efficient method of draw up guidelines on RFID distribution.

Comparative analysis of Bayesian and maximum likelihood estimators in change point problems with Poisson process

  • Kitabo, Cheru Atsmegiorgis;Kim, Jong Tae
    • Journal of the Korean Data and Information Science Society
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    • v.26 no.1
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    • pp.261-269
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    • 2015
  • Nowadays the application of change point analysis has been indispensable in a wide range of areas such as quality control, finance, environmetrics, medicine, geographics, and engineering. Identification of times where process changes would help minimize the consequences that might happen afterwards. The main objective of this paper is to compare the change-point detection capabilities of Bayesian estimate and maximum likelihood estimate. We applied Bayesian and maximum likelihood techniques to formulate change points having a step change and multiple number of change points in a Poisson rate. After a signal from c-chart and Poisson cumulative sum control charts have been detected, Monte Carlo simulation has been applied to investigate the performance of Bayesian and maximum likelihood estimation. Change point detection capacities of Bayesian and maximum likelihood estimation techniques have been investigated through simulation. It has been found that the Bayesian estimates outperforms standard control charts well specially when there exists a small to medium size of step change. Moreover, it performs convincingly well in comparison with the maximum like-lihood estimator and remains good choice specially in confidence interval statistical inference.

Characterization and Antibacterial Activity of Lactobacillus casei HK-9 Isolated from Korean Rice Wine, Makgeolli (막걸리에서 분리한 젖산세균인 Lactobacillus casei HK-9의 특성 및 항균 활성)

  • Baek, Hyun;Choi, Moon-Seup;Oh, Kye-Heon
    • KSBB Journal
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    • v.27 no.3
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    • pp.161-166
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    • 2012
  • The purpose of this work was to examine the antibacterial activity derived from a lactic acid bacterium isolated from korean rice wine, called makgeolli. Various physiological and biochemical properties of this strain were characterized. Both the BIOLOG system and phylogenetic analysis using 16S rRNA sequencing were utilized for identification, and the strain was designated as Lactobacillus casei HK-9, and registered in GenBank as [JQ951606]. Growth rate, production of organic acids (e.g., lactic acid and acetic acid), and pH changes during growth were monitored. The maximum concentrations of lactic acid and acetic acid were approximately 576 mM and 199 mM, respectively, and pH was changed from 7.00 to 3.74 after 72 h of incubation. HPLC was used to confirm the production of lactic acid and acetic acid. Significant antimicrobial activity of the concentrated supernatant was demonstrated against various food-poison causing bacteria (e.g., Bacillus cereus, Listeria monocytogenes, Staphylococcus aureus, methicillin-resistant Staphylococcus aureus, Escherichia coli, Salmonella enteritidis). Ethanol tolerance of L. casei HK-9 showed up to 12% of ethanol within the culture.

Identification of Potential Bacillus subtilis Probiotics from Korean Soybean Paste and Their Antimicrobial and Immune Activities

  • Seo, Weon-Taek;Nam, Sang-Hae;Lee, Chang-Kwon;Cho, Kye-Man
    • Preventive Nutrition and Food Science
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    • v.16 no.1
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    • pp.37-44
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    • 2011
  • The potential probiotic of a total of 15 Bacillus species isolated from Korean soybean paste (doenjang) was evaluated. Among those tested, the CSY191 and CSY388 strains were selected as probiotic bacteria due to their acid and bile tolerance, respectively. These strains were classified as Bacillus subtilis based on morphological, physiological, and chemotaxonomic features as well as on phylogenetic analysis based on their 16S rDNA sequences. These strains CSY191 and CSY388 showed a significant survival with rate range of 30.0 to 58.3% and of 31.0% to 58.1%, respectively, under artificial gastric acidic conditions at pH 3.0. These CSY191 and CSY388 strains appeared to have high antimicrobial activity against Salmonella Typhimurium, Bacillus cereus and Listeria monocytogenes. Also, methanol extractions (surfactin-like compounds) of strain CSY191 and strain CSY388 activated RAW264.7 microphages and induced the production of nitric oxide (NO) in a concentration-dependent manner, respectively. Therefore, strain CSY191 and strain CSY388 can be used as potential probiotics.

Capillary Size-exclusion Chromatography as a Gel-free Strategy in Plasma Proteomics

  • Cho, Man-Ho;Wishnok, John S.;Tannenbaum, Steven R.
    • Molecular & Cellular Toxicology
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    • v.1 no.2
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    • pp.87-91
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    • 2005
  • Although 2D-PAGE has been widely used as the primary method for protein separation, difficulties in displaying proteins with an extreme values of isoelectric paint (pI), molecular size and hydrophobicity limit the technique. In addition, time consuming steps involving protein transfer and extraction from the gel-pieces can result in sample loss. Here, we describe a novel protein separation technique with capillary size-exclusion chromatography (CSEC) for rapid protein identification from human plasma. The method includes protein fractionation along with molecular size followed by in-solution tryptic digestion and peptide analysis through reversed phase liquid chromatography (RPLC) coupled to nanoflow electrospray-tandem mass spectrometry (ESI-MS/MS). Tryptic peptides are applied an a $100\;{\mu}m\;i.d.{\times}10mm$ length pre-column and then separated on a $75\;{\mu}m{\times}200mm$ analytical column at -100 nL/min flaw rate. Proteins were identified over the wide ranges of pI (3.7-12.3) when this technique was applied to the analysis of $1-2\;{\mu}L$ of human plasma. This gel-free system provides fast fractionation and may be considered a complementary technique to SDS-PAGE in proteomics.