• Journal of Bio-Environment Control
• /
• v.32 no.1
• /
• pp.88-88
• /
• 2023

• Korean Journal of Plant Taxonomy
• /
• v.52 no.1
• /
• pp.29-34
• /
• 2022

A palynological study of genus Dioscorea L. in Korea was conducted to evaluate the taxonomic implications. As a result of confirming the palynological characteristics of seven taxa of Dioscorea L., including six that are distributed in Korea and D. tokoro found in Japan, sections or species were classified according to the characteristics, such as the number of apertures, the polar end shape, and exine sculpturing. Specifically, the exine sculptures of D. coreana and D. tokoro, erroneously known to be distributed in Korea, are distinguished. The change in the number of apertures is closely associated with microsporogenesis, and it can be presumed that disulcate pollen might have been derived from monosulcate pollen in Dioscorea.

• Journal of Environmental Science International
• /
• v.33 no.6
• /
• pp.383-402
• /
• 2024

Variations in lettuce growth and quality were observed depending on the type of artificial light source. The RGB LED treatment resulted in thick leaf development, leading to higher fresh weight, dry weight, and relative growth rates. Two cultivars, "Tomalin" and "seonpunggold," exhibited increased anthocyanin content and dark red leaf color under conditions of RGB LED treatment. Additionally, they exhibited high chlorophyll content under conditions of RGB LED and RGBFR LED treatments. Particularly, under Red LED treatment, the plants showed elongated leaves with narrow widths, resulting in a higher leaf shape index and a tendency towards leaf curling. Therefore, RGB LED lighting which appropriately blends red, blue, and green lights, is more effective than single lighr sources at improving lettuce growth and quality.

• Journal of Plant Biotechnology
• /
• v.47 no.2
• /
• pp.124-130
• /
• 2020

The sweet potato (Ipomoea batatas [L.] Lam.) is the sixth-most important crop in the world following rice, wheat, potato, maize, and cassava. Four varieties ('Beniharuka', 'Annobeni', 'Pungwonmi', 'Hogammi') and their Japanese cultivars are broadly distributed in South Korea. In the Korean marketplace, sweet potatoes are classified by color and shape, not by variety, making it necessary to differentiate varieties for uniform production and consumption. In this study, molecular markers were developed to distinguish the four varieties of sweet potato using SNPs and genotyping-by-sequencing (GBS) analysis via a tetra-primer amplification refractory mutation system (ARMS)-PCR. The results revealed that three variety-specific fragments (164 bp and 241 bp of SNP 04-27457768 and 292 bp of SNP 03-16195623) were amplified in the 'Beniharuka', 'Pungwonmi', and 'Annobeni' sweet potato varieties. There were instances where some varieties produced three bands within the gel electrophoresis, indicating heterozygosity at the given SNPs loci. DNA sequencing analysis also confirmed the results of electrophoresis at the SNPs loci. Overall, these molecular markers would provide a useful, rapid, and, simple evaluation method for the Korean sweet potato marketplace, where the mixing of varieties is a serious issue.

• Research in Plant Disease
• /
• v.26 no.2
• /
• pp.109-115
• /
• 2020

A disease causing leaf blight and vine rot was recognized on kudzu plants (Pueraria lobata) in Korea since 1991. A species of Phytophthora has been repeatedly isolated from the infected leaves. Identification in species level of the Phytophthora sp. remained unsolved. An isolate, KACC 47616 originally collected from Manchon Park in Daegu, has been kept in our laboratory. In 2013, three new isolates, KACC 47617 and KACC 47618 from Yeongyang and KACC 47619 from Gunwi in Gyeongbuk province, were collected and examined to classify up to species level by characterizing morphology, response to temperature and phylogenetic relationship. On the basis of morphological characters such as the nature of hyphal swelling, sporangia and sex organs, absence of chlamydospore production, optimum temperature for mycelial growth, and internal transcribed spacer rDNA and cytochrome oxidase subunit 1 sequence analysis of the pathogen, the causal fungus of kudzu plant was identified as Phytophthora asiatica.

• Journal of Plant Biotechnology
• /
• v.43 no.1
• /
• pp.1-11
• /
• 2016

Single nucleotide polymorphism (SNP) is an abundant form of genetic variation within individuals of species. DNA polymorphism can arise throughout the whole genome at different frequencies in different species. SNP may cause phenotypic diversity among individuals, such as individuals with different color of plants or fruits, fruit size, ripening, flowering time adaptation, quality of crops, grain yields, or tolerance to various abiotic and biotic factors. SNP may result in changes in amino acids in the exon of a gene (asynonymous). SNP can also be silent (present in coding region but synonymous). It may simply occur in the noncoding regions without having any effect. SNP may influence the promoter activity for gene expression and finally produce functional protein through transcription. Therefore, the identification of functional SNP in genes and analysis of their effects on phenotype may lead to better understanding of their impact on gene function for varietal improvement. In this mini-review, we focused on evidences revealing the role of functional SNPs in genes and their phenotypic effects for the purpose of crop improvements.

• Plant Biotechnology Reports
• /
• v.2 no.4
• /
• pp.253-258
• /
• 2008

The cDNA of the touch-induced genes (TCH) of the sweet potato [Ipomoea batatas (L.) Lam.] has been cloned and analyzed. IbTCH1, which exists as at least two-copy genes in the genome of the sweet potato, encodes for 148-amino acid polypeptides, and harbors four conversed $Ca^{2+}-binding$ motif EF-hands. IbTCH1 was shown to be expressed in the flower, leaf, thick pigmented root, and particularly in the white fibrous root, but expressed only weakly in the petiole. IbTCH1 is upregulated upon exposure to environmental stresses, dehydration, and jasmonic acid. Furthermore, IbTCH1 is developmentally regulated in the leaf and root. These results strongly indicate that the gene performs functions in both plant development and in defense/stress-signaling pathways.

• Horticultural Science & Technology
• /
• v.35 no.1
• /
• pp.79-87
• /
• 2017

We examined the effect of two greenhouse covering materials (glass or solid polycarbonate sheets) on the light environment and growth of tomato and cucumber plants. Spectral analysis showed that polycarbonate sheets entirely blocked radiation in both the UV - B (300 - 320 nm) and UV - A (320 - 400 nm) ranges, whereas glass transmitted UV - A and was only opaque to UV - B. The transmittance of photosynthetically active radiation (400 - 700 nm) and near infrared radiation (700 - 1100 nm) was higher in polycarbonate than glass. Air and soil temperatures were not significantly different between greenhouses covered with either material. The growth of cucumber plants was slightly affected by covering materials, whereas no significant changes in growth parameters were observed for tomato plants. The color parameters of tomato fruits were affected by the cover material, whereas cucumber fruits showed similar coloration in both glass and polycarbonate greenhouses.

• The Plant Pathology Journal
• /
• v.35 no.5
• /
• pp.498-507
• /
• 2019

Odontoglossum ringspot virus (ORSV) is a member of the genus Tobamovirus. It is one of the most prevalent viruses infecting orchids worldwide. Earlier studies reported the genetic variability of ORSV isolates from Korea and China. However, the evolutionary rate, timescale, and phylogeographical analyses of ORSV were unclear. Twenty-one coat protein (CP) gene sequences of ORSV were determined in this study, and used them together with 145 CP sequences obtained from GenBank to infer the genetic diversities, evolutionary rate, timescale and migration of ORSV populations. Evolutionary rate of ORSV populations was $1.25{\times}10^{-3}nucleotides/site/y$. The most recent common ancestors came from 30 year ago (95% confidence intervals, 26-40). Based on CP gene, ORSV migrated from mainland China and South Korea to Taiwan island, Germany, Australia, Singapore, and Indonesia, and it also circulated within east Asia. Our study is the first attempt to evaluate the evolutionary rates, timescales and migration dynamics of ORSV.

• Korean Journal of Agricultural Science
• /
• v.47 no.4
• /
• pp.903-920
• /
• 2020

Since its first demonstration as a practical genome editing tool in the early 2010s, the use of clustered regularly interspaced short palindromic repeat (CRISPR) along with the endonuclease Cas9 (CRISPR/Cas9) has become an essential choice for generating targeted mutations. Due to its relative simplicity and cost-effectiveness compared to other molecular scissors, i.e., zinc finger nuclease (ZFN) and transcription activator-like effector nuclease (TALEN), the CRISPR/Cas9 system has been shown to have a massive influence on genetic studies regardless of the biological kingdom. Although the system is in the process of being established, numerous protocols have already been released for the system and there have been various topics of CRISPR related papers published each year in ever-increasing manner. Here, we will briefly introduce CRISPR/Cas9 system and discuss the variants of the CRISPR system. Also, their applications to crop improvement will be dealt with mainly ornamental crops among horticultural crops other than Arabidopsis as a model plant. Finally, some issues on the barriers restraining the use of CRISPR system on floricultural crops, the prospect of CRISPR system as a DNA-free genome editing tool with efficient facilitators and finally, the future perspectives on the CRISPR system will be described.