• 제목/요약/키워드: halotolerant bacteria

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Isolation, Characterization, and Use for Plant Growth Promotion Under Salt Stress, of ACC Deaminase-Producing Halotolerant Bacteria Derived from Coastal Soil

  • Siddikee, M.A.;Chauhan, P.S.;Anandham, R.;Han, Gwang-Hyun;Sa, Tong-Min
    • Journal of Microbiology and Biotechnology
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    • 제20권11호
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    • pp.1577-1584
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    • 2010
  • In total, 140 halotolerant bacterial strains were isolated from both the soil of barren fields and the rhizosphere of six naturally growing halophytic plants in the vicinity of the Yellow Sea, near the city of Incheon in the Republic of Korea. All of these strains were characterized for multiple plant growth promoting traits, such as the production of indole acetic acid (IAA), nitrogen fixation, phosphorus (P) and zinc (Zn) solubilization, thiosulfate ($S_2O_3$) oxidation, the production of ammonia ($NH_3$), and the production of extracellular hydrolytic enzymes such as protease, chitinase, pectinase, cellulase, and lipase under in vitro conditions. From the original 140 strains tested, on the basis of the latter tests for plant growth promotional activity, 36 were selected for further examination. These 36 halotolerant bacterial strains were then tested for 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase activity. Twenty-five of these were found to be positive, and to be exhibiting significantly varying levels of activity. 16S rRNA gene sequencing analyses of the 36 halotolerant strains showed that they belong to 10 different bacterial genera: Bacillus, Brevibacterium, Planococcus, Zhihengliuella, Halomonas, Exiguobacterium, Oceanimonas, Corynebacterium, Arthrobacter, and Micrococcus. Inoculation of the 14 halotolerant bacterial strains to ameliorate salt stress (150 mM NaCl) in canola plants produced an increase in root length of between 5.2% and 47.8%, and dry weight of between 16.2% and 43%, in comparison with the uninoculated positive controls. In particular, three of the bacteria, Brevibacterium epidermidis RS15, Micrococcus yunnanensis RS222, and Bacillus aryabhattai RS341, all showed more than 40% increase in root elongation and dry weight when compared with uninoculated salt-stressed canola seedlings. These results indicate that certain halotolerant bacteria, isolated from coastal soils, have a real potential to enhance plant growth under saline stress, through the reduction of ethylene production via ACC deaminase activity.

Relationship between Chemical Property and Microbial Activity of Reclaimed Tidal Lands at Western Coast Area in Korea

  • Ko, Eun-Seong;Joung, Ji-An;Kim, Chang-Hwan;Lee, Su Hwan;Sa, Tongmin;Choi, Joon-Ho
    • 한국토양비료학회지
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    • 제47권4호
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    • pp.254-261
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    • 2014
  • The scientific information between microbial activities and chemical properties of reclaimed tidal soil is not enough to apply for reclamation projects. This study was conducted to investigate the relation between chemical properties and microbial activities of reclaimed tidal lands located at western coastal area (25 samples from Nampo, Ewon, Sukmoon and Shihwa sites). Most of the reclaimed soils showed chemical characteristics as salinity soil except Nampo site. The major component influenced the salinity of reclaimed soil was identified as a sodium from the relationship between EC and exchangeable cation. With an increase in EC of soil, the population of mesophilic bacteria decreases whereas halotolerant and halophilic bacteria increases. The population of mesophilic bacteria increased with an increase in both organic matter and dehydrogenase activity. However, the population of halotolerant and halophilic bacteria decreased with an increase in organic matter. Based on the relation between chemical property and microbial activity of reclaimed tidal soil, electrical conductivity and organic matter as chemical properties of soil, population of mesophilic bacteria, halotolerant and halophilic bacteria and dehydrogenase activity as microbial activities could be the major parameters for reclamation process.

Microbial Differentiation on Chemical Properties of Paddy Soils in Reclaimed Tidal Lands at Western-coast Area of Korea

  • Park, Mi-Na;Yang, Kwang-Min;Ryu, Jin-Hee;Sa, Tongmin;Choi, Joon-Ho
    • 한국토양비료학회지
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    • 제49권4호
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    • pp.381-387
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    • 2016
  • The scientific information on the microbial differentiation according to the changes in chemical properties of paddy soil in reclaimed tidal lands is not enough to understand the reclamation processes. The changes in microflora based on the chemical properties of paddy soils at the same sites of reclaimed tidal lands (21 samples from Nampo, Ewon, Sukmoon and Shihwa sites) were investigated in 2013 and 2015. In general, organic matter in paddy soils increased whereas pH decreased with the reclamation time. The electrical conductivities (EC) of soil samples were closely related to the exchangeable $Na^+$. With an increases in EC of paddy soils from 0.39 to $48.9dS\;m^{-1}$, the ratios (%) of halotolerant and halophilic bacteria to mesophilic bacteria proportionally increased from 0.2% to 102,000%. The population of halotolerant and halophilic bacteria in total microflora was also differentiated with the changes in EC of the same sites from reclaimed tidal soils within 2 years. The population of mesophilic bacteria decreased with an increase in EC above $5dS\;m^{-1}$. The microflora including halotolerant and halophilic bacteria could be a candidate as a biological parameter in evaluating the reclamation processes in addition to the chemical index of EC.

Halotolerant Spore-Forming Gram-Positive Bacterial Diversity Associated with Blutaparon portulacoides (St. Hill.) Mears, a Pioneer Species in Brazilian Coastal Dunes

  • Barbosa Deyvison Clacino;Irene Von Der Weid;Vaisman Natalie;Seldin Lucy
    • Journal of Microbiology and Biotechnology
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    • 제16권2호
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    • pp.193-199
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    • 2006
  • Halotolerant spore-forming Gram-positive bacteria were isolated from the root, rhizosphere, and non-rhizosphere soil of Blutaparon portulacoides. The different isolates were characterized genetically using an amplified ribosomal DNA restriction analysis (ARDRA), and phenotypically based on their colonial morphology, physiology, and nutritional requirements. Three different 16S rRNA gene-based genotypes were observed at a 100% similarity using the enzymes HinfI, MspI, and RsaI, and the phenotypic results also followed the ARDRA groupings. Selected strains, representing the different ARDRA groups, were analyzed by 16S rDNA sequencing, and members of the genera Halobaeillus, Virgibacillus, and Oceanobacillus were found. Two isolates showed low 16S rDNA sequence similarities with the closest related species of Halobacillus, indicating the presence of new species among the isolates. The majority of the strains isolated in this study seemed to belong to the species O. iheyensis and were compared using an AP-PCR to determine whether they had a clonal origin or not. Different patterns allowed the grouping of the strains according to Pearson's coefficient, and the resulting dendrogram revealed the formation of two main clusters, denoted as A and B. All the strains isolated from the soil were grouped into cluster A, whereas cluster B was exclusively composed of the strains associated with the B. portulacoides roots. This is the first report on the isolation and characterization of halotolerant spore-forming Gram-positive bacteria that coexist with B. portulacoides. As such, these new strains may be a potential source for the discovery of bioactive compounds with industrial value.

Preservation of Marine Heterotrophic Bacteria by Using a Deep-freezing Method

  • Park, Shin-Hye;Lee, Hyun-Sang;Lee, Hong-Kum
    • Journal of Microbiology
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    • 제39권3호
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    • pp.240-243
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    • 2001
  • The effect of cryoprotectants and suspending solutions on the preservation of marine heterotophic bacteria was investigated. Six halotolerant and four halophilic bacterial isolates suspended in either distilled water or artificial seawater were preserved in glycerol and dimethylsulfoxide at -70$\^{C}$, respectively. After one year of preservation, the recovery rates on the appropriate agar plates were estimated. The survival rate was found to be dependent on the strain tested, regardless of the preservation conditions tested.

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남은 음식물 발효를 위한 내염성 유산균의 분리 (Isolation of Halototlerant Lactic Acid Bacteria for Fermentation of Food Wastes)

  • 양시용;박홍양;김창원;박근규
    • 한국축산시설환경학회지
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    • 제7권2호
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    • pp.137-140
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    • 2001
  • The objective of this study was isolation of halotolerant lactic acid bacteria for fermentation of food wastes. 5 strains of lactic acid bacteria were isolated from fermented foods. Among isolated strains, the strain 5-2 was selected according to the growth characteristics in food wastes containing medium. The selected strain 5-2 was identified as Pediococcus acidilactici based on its biochemical characteristics.

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한국 근해에서 분리한 그람양성 세균의 화학 분류학적 및 표현형적 특성 (Chemosystematic and Phenotypic Characterization of Gram-positive Bacteria from Coastal Seawater, Korea)

  • 전정훈;박진숙
    • 미생물학회지
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    • 제36권3호
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    • pp.167-172
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    • 2000
  • 제주도의 여섯 지역과 인천 작약도 근해의 해수로부터 내염성 그람양성 세균 25균주를 분리하여 화학 분류학적 특징과 표현형적 특성을 조사하였다. 분리된 균주들은 화학 분류학적 특징에 의거하여 4개의 group으로 구분되었다. Group1은 40.~49.9 mol% 의 G+C함량과 MK-7의 menaquinome type, peptidoglycan의 주요 아미노산으로 meso-A2pm을 함유하며 Bacillus pumilus와 Bacillus licheniformis, Bacillu megaterium, bacillus subtilis로 동정되었으며, Group 2는 63.9~66.4 mol% 의 G+C 함량과 MK-8을 함유하는 Arthrobacter속 세균이었으며 , Group 3은 31.0~37.6 mol%의 G+G 함량과 MK-7을 함유하며 Staphylococcus haemolyticus, Staphylococcus saprophyticyus, Staphylococcus intermedius 로 , Group 4는 72.0 mol% 의 G+C 함량과 MK-8을 주요 quinone으로 함유하는 Micrococcus luteus로 동정되었다. 분리된 세균들 중 Bacillus 속 세균들은 68%로 우세한 분포를 나타내었다.

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재래식 메주중의 산생성균의 분포 (Occurrence of acid producing bacteria in Meju leaves)

  • 허성호;하덕모
    • Applied Biological Chemistry
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    • 제34권2호
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    • pp.130-133
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    • 1991
  • 재래식 메주의 23개 시료에 대해서 내부층과 외부층의 부위별로 산생성균수 및 총균수를 조사하고 이들 균주를 동정하였다. 산생성균은 내부층에 비하여 외부층에 많았고 각 부위에 있어서 호기성 산생성균보다 혐기성 산생성균이 많은 경향을 나타내었다. 호기성 산생성균 중 비호염성균 및 내염성균의 평균균수는 각각 $24{\times}10^6$$33{\times}10^5cell/g$였고 혐기성 산생성균 중 비호염성균 및 내염성균의 평균균수는 $10{\times}10^7$$58{\times}10^5cell/g$였다. 호기성 산생성균 2균주는 Micrococcus sp., 혐기성 산생성균 3균주는 Strepococcus sp., Pediococcs sp. 및 Lactobacillus sp., 호기성 일반세균 2균주는 Bacillus sp.으로 각각 동정되었다.

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Halotolerant Plant Growth Promoting Bacteria Mediated Salinity Stress Amelioration in Plants

  • Shin, Wansik;Siddikee, Md. Ashaduzzaman;Joe, Manoharan Melvin;Benson, Abitha;Kim, Kiyoon;Selvakumar, Gopal;Kang, Yeongyeong;Jeon, Seonyoung;Samaddar, Sandipan;Chatterjee, Poulami;Walitang, Denver;Chanratana, Mak;Sa, Tongmin
    • 한국토양비료학회지
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    • 제49권4호
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    • pp.355-367
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    • 2016
  • Soil salinization refers to the buildup of salts in soil to a level toxic to plants. The major factors that contribute to soil salinity are the quality, the amount and the type of irrigation water used. The presented review discusses the different sources and causes of soil salinity. The effect of soil salinity on biological processes of plants is also discussed in detail. This is followed by a debate on the influence of salt on the nutrient uptake and growth of plants. Salinity decreases the soil osmotic potential and hinders water uptake by the plants. Soil salinity affects the plants K uptake, which plays a critical role in plant metabolism due to the high concentration of soluble sodium ($Na^+$) ions. Visual symptoms that appear in the plants as a result of salinity include stunted plant growth, marginal leaf necrosis and fruit distortions. Different strategies to ameliorate salt stress globally include breeding of salt tolerant cultivars, irrigation to leach excessive salt to improve soil physical and chemical properties. As part of an ecofriendly means to alleviate salt stress and an increasing considerable attention on this area, the review then focuses on the different plant growth promoting bacteria (PGPB) mediated mechanisms with a special emphasis on ACC deaminase producing bacteria. The various strategies adopted by PGPB to alleviate various stresses in plants include the production of different osmolytes, stress related phytohormones and production of molecules related to stress signaling such as bacterial 1-aminocyclopropane-1-carboxylate (ACC) derivatives. The use of PGPB with ACC deaminase producing trait could be effective in promoting plant growth in agricultural areas affected by different stresses including salt stress. Finally, the review ends with a discussion on the various PGPB activities and the potentiality of facultative halophilic/halotolerant PGPB in alleviating salt stress.