• Title/Summary/Keyword: functional cluster analysis

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Vibrational Analysis and Intermolecular Hydrogen Bonding of Azodicarbonamide in the Pentamer Cluster

  • Lee, Choong-Keun;Park, Sun-Kyung;Min, Kyung-Chul;Kim, Yun-Soo;Lee, Nam-Soo
    • Bulletin of the Korean Chemical Society
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    • v.29 no.10
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    • pp.1951-1959
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    • 2008
  • Pentamer cluster of azodicarbonamide (ADA) based on the crystalline structure was investigated for the equilibrium structure, the stabilization energies, and the vibrational properties at various levels of the density functional theory. Stretching force constants of N${\cdot}{\cdot}{\cdot}$H or O${\cdot}{\cdot}{\cdot}$H, and angle-bending force constants of N-H${\cdot}{\cdot}{\cdot}$N or N-H${\cdot}{\cdot}{\cdot}$O for intermolecular hydrogen bonds in the pentamer cluster were obtained in 0.2-0.5 mdyn/$\AA$ and 1.6-2.0 mdyn$\AA$, respectively. The geometry of central ADA molecule fully hydrogen bonded with other four molecules shows good coincidence to the crystalline structure except the bond distances of N-H. Calculated Raman and infrared spectra of central ADA molecule in cluster represent well the experimental spectra of ADA obtained in the solid state compared to a single molecule. Detailed structural and vibrational properties of central ADA molecule in the pentamer cluster are presented.

The Study on the Downtown Spatial Functional Analysis and Downtown Classification using GIS (GIS를 활용한 도심 공간기능분석과 유형화에 관한 연구)

  • Kim, Heung-Kwan;Shin, Yong-Eun;Baek, Tae-Kyung;Kang, Gi-Cheol;Jeng, Hee-Su;Oh, Ju-Heon;Yeo, Sung-Jun
    • Journal of the Korean Association of Geographic Information Studies
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    • v.10 no.4
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    • pp.75-86
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    • 2007
  • The subjects were fifteen dong at downtown of Busan. LQ index and cluster analysis were used to research space functions of downtown in both years, that is to say, 2000 and 2005. At the analysis of LQ index in 2000, the secondary industries were specialized at traditional markets as well as large-scaled commercial districts, while the tertiary industries were done at financial business districts. LQ index in 2005 did not make change mostly comparing with the one in 2000: But, main businesses at downtown that belonged to the tertiary industries rapidly dwindled at old downtown to make appearance at Seomyeon of new downtown. Main businesses at old downtown in the past moved to new downtown to dwindle main functions at old downtown. The cluster analysis was done by using LQ index to classify into three clusters. The first cluster was old downtown that functions of downtown dwindle, and the second cluster was residence area, and the third cluster was the area where space function at downtown was very much active. The findings were as follow: Firstly, various kinds of urban regeneration plans should be made to control dwindling of old downtown and to establish comprehensive and systematic plans on new downtown. Secondly, downtown space functions could be placed depending upon specialization of each industry so that industries being suitable to the area should be introduced to construct development base.

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Study on Relationship between Elderly Group Lifestyle and Selection Attributes in the Health Functional Foods (실버층 라이프스타일에 따른 건강기능식품 선택속성에 관한 연구)

  • Lee, Myung Sook;Kim, Sook Eung
    • Korean Journal of Clinical Pharmacy
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    • v.25 no.4
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    • pp.286-295
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    • 2015
  • Objective: This experiment is to study how elderly group and their various lifestyles interact with health functional foods, according to their selection behavior. Different lifestyles will be observed closely, as well as how different health conditions and consumer involvements will affect critical decision making in selecting health functional foods. Method: Theories and discoveries from original advanced research were compared parallel to the new study. Results: First, cluster analysis and exploratory analysis were performed amongst different elder lifestyles. Lifestyle exploratory analysis was used for healthy, unique, leisure, and economical-style elders. Cluster analysis was used for material trend oriented, health oriented, complacent oriented-style elders. Health Functional Foods' selection trait Exploratory Factor Analysis showed that product's originality (function, uniqueness, specialty, compatibility, distributor, expiration date), quality (amount, daily dose, visual representation, accessibility, portability, natural ingredients), and popularity (product container, brand image, taste and smell, advertised product, domestic or import, well-known function) were the three main causes. Secondly, the amount of benefits for the elderly group health lifestyle were affected by 'Interest in health', 'Notability of the health functional food', and 'Functionality approved mark'. Specifically, the importance of, 'Interest in health', 'Notability of health functional food', and 'Functionality approved mark' were noticeably high within health oriented elders. Lastly, after examining the data from elder lifestyle's relationship with health functional food selection trait, all three different results showed equal importance. If you closely examine material trend oriented elderly group, selection trait showed distinctively high regards in 'Fundamental Attribute', 'Typical Attribute', and 'Cognitive Attribute'. Health oriented elders showed their distinctively high regards in 'Natural Attribute', and less consideration in 'Typical Attribute' and 'Cognitive Attribute'. Complacent oriented-style elderly group showed less focus on 'Fundamental Attribute', and even less in 'Typical Attribute', and 'Cognitive Attribute'. Health oriented elderly group concluded with above data from the fact that they showed most importance and involvement in health beneficial products that are scientifically proven. Material trend oriented elderly group showed balanced traits in their concluded data, showing that they prefer function, safety, as well as the brand image and their reputation. Also, they consider the products' outer elements, such as design and product name, in order to sense inner functions. Conclusion: So, Silver Business corporations must develop products to fulfill the market demands, and strategize marketing plans to better target the correct audience.

PathTalk: Interpretation of Microarray Gene-Expression Clusters in Association with Biological Pathways

  • Chung, Tae-Su;Chung, Hee-Joon;Kim, Ju-Han
    • Genomics & Informatics
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    • v.5 no.3
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    • pp.124-128
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    • 2007
  • Microarray technology enables us to measure the expression of tens of thousands of genes simultaneously under various experimental conditions. Clustering analysis is one of the most successful methods for analyzing microarray data using the assumption that co-expressed genes may be co-regulated. It is important to extract meaningful clusters from a long unordered list of clusters and to evaluate the functional homogeneity and heterogeneity of clusters. Many quality measures for clustering results have been suggested in different conditions. In the present study, we consider biological pathways as a collection of biological knowledge and used them as a reference for measuring the quality of clustering results and functional homogeneities. PathTalk visualizes and evaluates functional relationships between gene clusters and biological pathways.

The Cosmetic Purchase Behavior of Women in Their 20s (I) - Focused on Consumption Value - (20대 여성의 화장품 구매행동에 관한 연구 (I) - 소비가치를 중심으로 -)

  • Park, Kwanghee
    • Journal of the Korean Society of Costume
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    • v.67 no.3
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    • pp.47-65
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    • 2017
  • The purpose of this study was to divide respondents by consumption values, and to examine the differences in their cosmetic purchase behavior. Cosmetic purchase behavior consisted of variables such as purchase frequency, purchase amount, place of purchase, purchase reason, reason for using cosmetics, purchase propensity, degree of using information source, and selection criteria. A survey was conducted with 308 women between the ages 20 and 29 from December 5th to 10th 2016. Data collected from the respondents through an Internet survey were analyzed using descriptive statistics, factor analyses, cluster analysis, analyses of variance and chi-square tests. Four consumption value dimensions emerged that were termed emotional, differentiated individuality-pursuing, functional and social value. The respondents were classified into three groups(emotional consumer group, functional consumer group, active consumer group) by cluster analysis using four dimensions of consumption value. The results of the analyses of variance and chi-square tests showed significant differences in purchase frequency, place of purchase, purchase reason, reason for using cosmetics, degree of using information source and selection criteria among groups classified by consumption value. However, there were no differences in purchase amount and purchase propensity among them.

Related Factors to Quality of Life among Hospitalized Cancer Patients Undergoing Chemotherapy (항암화학요법을 받은 입원 암환자의 삶의 질에 영향을 미치는 요인)

  • Jeong, Ji-Yeon;So, Hyang-Sook;Hong, Ji-Eun;Chae, Myeong-Jeong;Han, Geun-Hye
    • Asian Oncology Nursing
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    • v.12 no.1
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    • pp.84-91
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    • 2012
  • Purpose: The purpose of this study was to identify relationships between quality of sleep, symptom cluster, depression, environmental disorder, and quality of life among hospitalized cancer patients. Methods: The subjects were 114 patients who underwent chemotherapy for colon cancer, gastric cancer, gynecologic cancer and breast cancer. They were recruited from the cancer center of a university hospital. Data were collected from August 4th to 30th, 2011. The questionnaires included the Korean sleep scale A (quality of sleep), MDASI-K (symptom cluster), the environmental sleep disturbing scale, Zung's depression scale, and the Korean version of EORTC QLQ-C30. The collected data was analyzed by t-test, ANOVA, multiple regression analysis using the SPSS 19.0 program. Results: Functional QOL was negatively associated with symptom QOL (r=-.798, p<.001). Symptom cluster, depression, & spouse (46.3%) were the most powerful predictors for functional QOL (46.3%) and symptom QOL (53.4%). Conclusion: It is evident that oncology nurses need to evaluate two dimensions of quality of life for cancer patients, for example, functional and symptom QOL. We recommend nurses develop specific protocols for relieving physical symptoms and alleviating depression, and furthermore test the effectiveness of them.

Expression and Characterization of Trehalose Biosynthetic Modules in the Adjacent Locus of the Salbostatin Gene Cluster

  • Choeng, Yong-Hoon;Yang, Ji-Yeon;Delcroix, Gaetan;Kim, Yoon-Jung;Chang, Yong-Keun;Hong, Soon-Kwang
    • Journal of Microbiology and Biotechnology
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    • v.17 no.10
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    • pp.1675-1681
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    • 2007
  • The pseudodisaccharide salbostatin, which consists of valienamine linked to 2-amino-1,5-anhydro-2-deoxyglucitol, is a strong trehalase inhibitor. From our Streptomyces albus ATCC 21838 genomic library, we identified thirty-two ORFs in a 37-kb gene cluster. Twenty-one genes are supposed to be a complete set of modules responsible for the salbostatin biosynthesis. Through sequence analysis of the gene cluster, some of the upstream gene products (SalB, SalC, SalD, SalE, and SalF) revealed functional resemblance with trehalose biosynthetic enzymes. On the basis of this rationale, we isolated the five genes (salB, salC, salD, salE, and salF) from the S. albus ATCC 21838 and cloned them into the expression vector pWHM3. We demonstrated the noticeable expression and accumulation of trehalose, using only the five upstream biosynthetic gene cluster of salbostatin, in the transformed Streptomyces lividans TK24. Finally, 490 mg/l trehalose was produced by fermentation of the transformant with sucrosedepleted R2YE media.

Cloning and Characterization of the Urease Gene Cluster of Streptococcus vestibularis ATCC49124

  • Kim Geun-Young;Lee Mann-Hyung
    • Journal of Microbiology and Biotechnology
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    • v.16 no.2
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    • pp.286-290
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    • 2006
  • A genomic library of Streptococcus vestibularis ATCC49124 was constructed in an E. coli plasmid vector, and the urease-positive transformants harboring the urease gene cluster were isolated on Christensen-urea agar plates. The minimal DNA region required for urease activity was located in a 5.6 kb DNA fragment, and a DNA sequence analysis revealed the presence of a partial ureI gene and seven complete open reading frames, corresponding to ureA, B, C, E, F, G, and D, respectively. The nucleotide sequence over the entire ure gene cluster and 3'-end flanking region of S. vestibularis was up to 95% identical to that of S. salivarius, another closely related oral bacterium, and S. thermophilus, isolated from dairy products. The predicted amino acid sequences for the structural peptides were 98-100% identical to the corresponding peptides in S. salivarius and S. thermophilus, respectively, whereas those for the accessory proteins were 96-100% identical. The recombinant E. coli strain containing the S. vestibularis ure gene cluster expressed a high level of the functional urease holoenzyme when grown in a medium supplemented with 1 mM nickel chloride. The enzyme was purified over 49-fold by using DEAE-Sepharose FF, Superdex HR 200, and Mono-Q HR 5/5 column chromatography. The specific activity of the purified enzyme was 2,019 U/mg, and the Michaelis constant ($K_{m}$) of the enzyme was estimated to be 1.4 mM urea. A Superose 6HR gel filtration chromatography study demonstrated that the native molecular weight was about 196 kDa.

The Type Classification and Characteristic Analysis of Biotope in Rural Areas (농촌비오톱 유형분류 및 특성분석)

  • Cho, Hyun-Ju;Ra, Jung-Hwa;SaGong, Jung-Hee;Ryu, Yeon-Su
    • Journal of Korean Society of Rural Planning
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    • v.15 no.4
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    • pp.19-32
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    • 2009
  • This research has a significant meaning to break from the urban ecology-oriented biotope research and realize the importance of rural landscape as a reserve area for systemizing the types of rural biotope. The results are as follows. First of all, items for classification of 16 rural biotope areas are designed and total 9 itmes in slope from spatial structural point of view and 7 items in minute-variety from functional point of view. Also, as the result of on-site research on case areas based on classified items, there are 46 types of rural biotope such as coniferous forest, hedgerow and so on. For example, it is proven that uncultivated stripe showed the most frequent emergence. As a result of cluster analysis of average linkage method between clusters, 12 clusters are classified as a clusters and 13 biotope types are re-corrected and complemented through brainstorming process and then total 12 clusters are selected as final rural biotope type groups. As a rural biotope type cluster and character analysis according to types based on on-site research and documentary survey, for example, it is analyzed that the ratio of transmissible covering ratio is 100%, the ratio of green coverage is 90% in 'woodland in cultivated area biotope type cluster'.

Classification of Urban Arterial Roads Based on Traffic Characteristics (교통특성에 따른 도시간선도로 위계분류법)

  • Lee, Jinsun
    • The Journal of The Korea Institute of Intelligent Transport Systems
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    • v.17 no.2
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    • pp.32-38
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    • 2018
  • Studies on classification of national roads have been continued, but there is little research on the classification of urban arterial roads. Due to the increase of traffic volume, urban arterial roads do not perform well as main roads. In this paper, the function of urban arterial road was established by using cluster analysis using traffic characteristics. Traffic characteristics such as traffic volume, weekend coefficient and speed coefficient were used to establish the functions of 55 main arterial roads in Seoul. The results of this paper are compared with those of the method using AADT. The method using AADT classifies the characteristics according to the traffic volume of the whole lane. In this paper, however, the results are derived using the traffic volume per lane reflecting the actual traffic volume. In addition, the functional classification of the arterial roads in Seoul was compared with the results of this paper to verify that the traffic characteristics were reflected. As a result, the method presented in this paper is more effective in showing traffic characteristics than the current highway functional classification method, and the functional classification system will be helpful for road extension and planning design.