• Title/Summary/Keyword: fragment

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A Macrolide-Lincosamide-Streptogramin B Resistance Determinant Gene (ermJ) Cloned from B, anthracis 590

  • Kim, Hee-Sun;Choi, Eung-Chil;Kim, Byong-Kak;Park, Young-In
    • Archives of Pharmacal Research
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    • v.15 no.1
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    • pp.58-61
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    • 1992
  • Bacillus anthracis 590 having an inducibla resistance determinant to MLS antibiotics was isolated from a soli sample in Korea. The resistance gene (ernJ) was cloned by Southern blotting of chromosomal DNA fragment digested by various restriction enzymes and coloy hybridization method and the cloned plasmid was named as pBA423. The size of inserted DNA fragment of pBS42 vector was about 2.9 kb and the DNA sequence of the subcloned fragment (Hinc II-Hinc II, 1.4kb) WAS determined. The DNA sequence of ernJ was composed of 357 bp for leader region and 861 bp for the structural gene. Because the leader sequence of ernJ was homologous to that of ermK, the expression of ernJ is also thought to be controlled by a transcriptionl attenuation mechanism.

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Posterior Epidural Migration of Thoracic Disc Fragment

  • Kim, Il-Sup;Lee, Sang-Won;Son, Byung-Chul;Sung, Jae-Hoon
    • Journal of Korean Neurosurgical Society
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    • v.43 no.5
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    • pp.239-241
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    • 2008
  • Migration of a disc fragment to the posterior epidural space is rare, especially in the thoracic spine. Only four such cases of posterior epidural migration of thoracic disc fragments have been reported. The authors report a case of 66-year-old man who presented with back pain and right leg weakness due to posterior epidural migration of thoracic disc fragment. The patient was successfully treated by laminectomy and partial facetectomy with disc removal.

Molecular Cloning and Expression of Genes Related to Antifungal Activities from Enterobacter sp. B54 Antagonistic to Phytophthora capsici

  • YOON, SANG-HONG
    • Journal of Microbiology and Biotechnology
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    • v.9 no.3
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    • pp.352-357
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    • 1999
  • Enterobacter sp. B54 inhibited growth of the fungus Phytophthora capsici on potato dextrose agar (PDA). Three mutants with antifungal activities (denoted M54-47, M54-113, and M54-329) which were lost or increased, through Pl::Tn5 lac mutagenesis, were used to isolate genes responsible for fungal inhibition on PDA. Two clones were selected from the partially EcoR1-digested genomic library of the wild-type strain by probing with genomic flanking sequences of each mutant. We have isolated a 20-kb EcoR1 genomic DNA fragment from this strain that contains genes involved in hyphal growth inhibition of P. capsici on PDA. Subcloning and expression analysis of the above DNA fragment identified a 8-kb region which was necessary for antifungal activities. A 8-kb HindⅢDNA fragment covers three genomic loci inserted by Tn5 lac in each mutant. This suggested that all genes which are related to antifungal activities might be clustered in simple forms of at least 5-8 kb sizes.

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RFLP(Restriction Fragment Length Polymorphism) by Ribosomal RNA and M13 Probes of Clostridum thermocellum Strains (Ribosomal RNA와 M13 probe에 의한 clostridium thermocellum 균주들의 RFLP(Restriction Fragment Length Polymorphism)비교)

  • 이호섭;홍수형;하지홍
    • Korean Journal of Microbiology
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    • v.29 no.3
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    • pp.189-194
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    • 1991
  • The degree of the genetic variations among Clostridium thermocellum ATCC 27405 and the wild type strains was investigated by the mehtod of GC ratio, DNA-DNA hybridization and RFLP (Restriction Fragment Length Polymorphism) patterns by ribosomal RNA and M13 probe. GC ratio and KNA homology values of th three isolates were approximately equal to those of ATCC type strain. The RFLP patterns by the rRNA and M13 probe showed some differences among C. thermocellum ATCC 27405, wild type strains and Clostridium thermohydrosulfuricum ATCC 33223, indicating that the two probes can be useful in subspecies- and apecies-identification.

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High Level Expression of XMP Aminase Gene in Esherichia coli (Esherichia coli XMP Aminase 유전자의 발현 증대)

  • 조정일;한철주
    • Journal of Food Hygiene and Safety
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    • v.6 no.3
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    • pp.133-137
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    • 1991
  • In order to increase the expression of XMP aminase [EC 6.3.4.1], which catalizes the conversion of 5'-XMP to the DNA fragment containing gua A gene coding for XMP aminase from pLC 34-10 plasmid was subcloned into pBR 322, and 1.7 kb gua A gene fragment was recloned under the control of trp promoter of pDR 720, E. coli expression vector. XMP aminase activity had increased by about 17 times when compared with that of the strain earring pLC 34-10.

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임상가를 위한 특집 3 - Minimally Invasive Approach with Composite Resin

  • Jang, Hui-Seon
    • The Journal of the Korean dental association
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    • v.51 no.11
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    • pp.604-609
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    • 2013
  • Crown fractures are relatively common trauma to anterior teeth, and should be restored immediately in most cases. For those who suffer from unfortunate traumatic episode, the best treatment option should be minimally invasive approach. In the presence of fractured tooth fragment, reattachment procedure creates positive emotional response in the patient and simplifies the procedure and maintenance of the patient's original tooth anatomy and occlusion. Without fractured tooth fragment, next conservative option could be direct composite restoration which is based on minimal invasion concept. This article proposes simple and very conservative techniques that anyone can do in daily practice.

A genetic map of the R-factor pKU10 isolated from pseudomonas putida (Pseudomonas putida에서 분리한 R-factor pKU 10의 유전자 지도)

  • 임영복;민경미;이영록
    • Korean Journal of Microbiology
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    • v.26 no.3
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    • pp.167-172
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    • 1988
  • A genetic map of the IncP-1 group plasmid pKU10 has been prepared through the construction of recombinant plasmids containing various fragments of pKU10. Phenotypic analysis of these derivatives has identified the location of genes encoding resistance to ampicillin, tetracyclin, and chloramphenicol. The region involved in conferring resistance to ampicillin was located around two PstI sites that are 1.0Kb apart. The tetracyclin resistance gene was mapped on the region of HindIII E fragment and a part of HindIII D fragment, and the determinant for chloramphenicol resistance gene was localized on HindIII D fragment.

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Five Computer Simulation Studies of Whole-Genome Fragment Assembly: The Case of Assembling Zymomonas mobilis ZM4 Sequences

  • Jung, Cholhee;Choi, Jin-Young;Park, Hyun Seck;Seo, Jeong-Sun
    • Genomics & Informatics
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    • v.2 no.4
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    • pp.184-190
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    • 2004
  • An approach for genome analysis based on assembly of fragments of DNA from the whole genome can be applied to obtain the complete nucleotide sequence of the genome of Zymomonas mobilis. However, the problem of fragment assembly raise thorny computational issues. Computer simulation studies of sequence assembly usually show some abnormal assemblage of artificial sequences containing repetitive or duplicated regions, and suggest methods to correct those abnormalities. In this paper, we describe five simulation studies which had been performed previous to the actual genome assembly process of Zymomonas mobilis ZM4.

Cloning of Ribulose-1,5-bisphosphate Carboxylase/oxygenase Large Subunit(rbcL) Gene from Korean Ginseng (Panax ginseng C.A. Meyer) (고려인삼(Panax ginseng C.A. Meyer) Ribulose-1,5-bisphosphate Carboxylase/oxygenase Large Subunit(rbct) Gene의 Cloning)

  • 이정헌;임용표
    • Journal of Ginseng Research
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    • v.19 no.1
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    • pp.51-55
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    • 1995
  • The DNA fragment containing ginseng ribulose-1,5-bisphosphate carboxytase/oxygenase large subunit(rbcL) gene was cloned from the ginseng chloroplast EcoRl library by colony lift hybridization with tobacco rbcL gene probe. From the screened clone, the DNA fragment containing ginseng rbcL gene was digested with several restriction enzyme and analyzed by Southern blot hybridization for the construction of restriction map. The ginseng rbcL gene fragment was subcloned in pBluescript II SK + vector and sequence analysis was performed. The nucleotide sequence of ginseng rbcL gene was compared with those of petunia, tobacco, alfalfa, rice and barley, which showed a homology of 93.1%, 95.2%, 90.5%, 85.5% and 84.3%, respectively.

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Multiplex Polymerase Chain Reaction Assay for Simultaneous Detection of Candida albicans and Candida dublinensis

  • Lim, Young-Hee;Lee, Do-Hyun
    • Journal of Microbiology
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    • v.40 no.2
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    • pp.146-150
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    • 2002
  • A multiplex polymerase chain reaction (PCR) assay was developed for the identification of two Candida species-albicans and dubliniensis. Three sets of primers were selected from different genomic sequences to specifically amplify a 516 bp fragment within the tops gene, specific for several species of the genus Candida (CCL primers); a 239 bp fragment within the $\alpha$INT1 gene, specific for Candida albicans (CAL primers); and a 175 bp fragment within the ALSD1 gene, specific for Candida dubliniensis (CDL primers). Using the primers in conjunction (multiplex PCR), we were able to detect both C. albicans and C. dubliniensis and to differentiate between them. The detection limit of the PCR assay was approximately 10 cells per milliliter of saline. Thus, this multiplex PCR assay can be applied for differentiation of C. albicans and C. dubliniensis from clinical specimens.