• KSCE Journal of Civil and Environmental Engineering Research
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• v.41 no.4
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• pp.331-340
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• 2021

The blast damage behavior of reinforced concrete (RC) structures exposed to unexpected extreme loading was investigated. To enhance the accuracy of numerical simulation for blast loading on RC structures with seven blast points, the calculation of blast loads using the Euler-flux-corrected-transport method, the proposed Euler-Lagrange coupling method for fluid-structure interaction, and the concrete dynamic damage constitutive model including the strain rate-dependent strength and failure models was implemented in the ANSYS-AUTODYN solver. In the analysis results, in the case of 20 kg TNT, only the slab member at three blast points showed moderate and light damage. In the case of 100 kg TNT, the slab and girder members at three blast points showed moderate damage, while the slab member at two blast points showed severe damage.

• The Plant Pathology Journal
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• v.37 no.3
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• pp.232-242
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• 2021

Glomerella leaf spot (GLS) is a severe infectious disease of apple whose infective area is growing gradually and thus poses a huge economic threat to the world. Different species of Colletotrichum including Colletotrichum gloeosporioides are responsible for GLS. For efficient GLS control, it is important to understand the mechanism by which the cruciferous crops and C. gloeosporioides interact. Arginine is among one of the several types of amino acids, which plays crucial role in biochemical and physiological functions of fungi. The arginine biosynthesis pathway involved in virulence among plant pathogenic fungi is poorly understood. In this study, CgCPS1 gene encoding carbamoyl phosphate synthase involved in arginine biosynthesis has been identified and inactivated experimentally. To assess the effects of CgCPS1, we knocked out CgCPS1 in C. gloeosporioides and evaluated its effects on virulence and stress tolerance. The results showed that deletion of CgCPS1 resulted in loss of pathogenicity. The ∆cgcps1 mutants showed slow growth rate, defects in appressorium formation and failed to develop lesions on apple leaves and fruits leading to loss of virulence while complementation strain (CgCPS1-C) fully restored its pathogenicity. Furthermore, mutant strains showed extreme sensitivity to high osmotic stress displaying that CgCPS1 plays a vital role in stress response. These findings suggest that CgCPS1 is major factor that mediates pathogenicity in C. gloeosporioides by encoding carbamoyl phosphate that is involved in arginine biosynthesis and conferring virulence in C. gloeosporioides.

• Microbiology and Biotechnology Letters
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• v.47 no.3
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• pp.401-411
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• 2019

All Idiomarina species are isolated from saline environments; microorganisms in such extreme habitats develop metabolic adaptations and can produce compounds such as proteases with an industrial potential. ARDRA and 16S rRNA gene sequencing are established methods for performing phylogenetic analysis and taxonomic identification. However, 16S-23S ITS is more variable than the 16S rRNA gene within a genus, and is therefore, used as a marker to achieve a more precise identification. In this study, ten protease producing Idiomarina strains isolated from the Peruvian salterns were characterized using biochemical and molecular methods to determine their bacterial diversity and industrial potential. In addition, comparison between the length and nucleotide sequences of a 16S-23S ITS region allowed us to assess the inter and intraspecies variability. Based on the 16S rRNA gene, two species of Idiomarina were identified (I. zobellii and I. fontislapidosi). However, biochemical tests revealed that there were differences between the strains of the same species. Moreover, it was found that the ITS contains two tRNA genes, $tRNA^{Ile(GAT)}$ and $tRNA^{Ala(TGC)}$, which are separated by an ISR of a variable size between strains of I. zobellii. In one strain of I. zobellii (PM21), we found nonconserved nucleotides that were previously not reported in the $tRNA^{Ala}$ gene sequences of Idiomarina spp. Thus, based on the biochemical and molecular characteristics, we can conclude that protease producing Idiomarina strains have industrial potential; only two I. zobellii strains (PM48 and PM72) exhibited the same properties. The differences between the other strains could be explained by the presence of subspecies.

• Journal of Microbiology and Biotechnology
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• v.32 no.9
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• pp.1110-1119
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• 2022

Fe-S clusters are versatile and essential cofactors that participate in multiple and fundamental biological processes. In Escherichia coli, the biogenesis of these cofactors requires either the housekeeping Isc pathway, or the stress-induced Suf pathway which plays a general role under conditions of oxidative stress or iron limitation. In the present work, the Fe-S cluster assembly Isc and Suf systems of acidophilic Bacteria and Archaea, which thrive in highly oxidative environments, were studied. This analysis revealed that acidophilic microorganisms have a complete set of genes encoding for a single system (either Suf or Isc). In acidophilic Proteobacteria and Nitrospirae, a complete set of isc genes (iscRSUAX-hscBA-fdx), but not genes coding for the Suf system, was detected. The activity of the Isc system was studied in Leptospirillum sp. CF-1 (Nitrospirae). RT-PCR experiments showed that eight candidate genes were co-transcribed and conform the isc operon in this strain. Additionally, RT-qPCR assays showed that the expression of the iscS gene was significantly up-regulated in cells exposed to oxidative stress imposed by 260 mM Fe₂(SO₄)₃ for 1 h or iron starvation for 3 h. The activity of cysteine desulfurase (IscS) in CF-1 cell extracts was also upregulated under such conditions. Thus, the Isc system from Leptospirillum sp. CF-1 seems to play an active role in stressful environments. These results contribute to a better understanding of the distribution and role of Fe-S cluster protein biogenesis systems in organisms that thrive in extreme environmental conditions.

• Proceedings of the Microbiological Society of Korea Conference
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• 2001.11a
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• pp.39-45
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• 2001

Extremophiles are unique microorganisms that are adapted to survive in ecological niches such as high or low temperatures, extremes of pH, high salt concentrations and high pressure. These unusual microorganisms have unique biochemical features which can be exploited for use in the biotechnological industries. Due to the high biodiversity of extremophilic archaea and bacteria and their existence in various biotopes a variety of biocatalysts with different physicochemical properties have been discovered. The extreme molecular stability of their enzymes, membranes and the synthesis of unique organic compounds and polymers make extremophiles interesting candidates for basic and applied research. Some of the enzymes from extremophiles, especially hyperthermophilic marine microorganisms (growth above $85^{\circ}C$), have already been purified in our laboratory. These include the enzyme systems from Pyrococcus, Pyrodictium, Thermococcus and Thermotoga sp. that are involved in polysacharide modification and protein bioconversion. Only recently, the genome of the thermoalkaliphilic strain. Anaerobranca gottschalkii has been completely sequenced providing a unique resource of novel biocatalysts that are active at high temperature and pH. The gene encoding the branching enzyme from this organism was cloned and expressed in a mesophilic host and finally characterized. A novel glucoamylase was purified from an aerobic archaeon which shows optimal activity at $90^{\circ}C$ and pH 2.0. This thermoacidophilic archaeon Picrophilus oshimae grows optimally at pH 0.7 and $60^{\circ}C$. Furthermore, we were able to detect thermoactive proteases from two anaerobic isolates which are able to hydrolyze feather keratin completely at $80^{\circ}C$ forming amino acids and peptides. In addition, new marine psychrophilic isolates will be presented that are able to secrete enzymes such as lipases, proteases and amylases possessing high activity below the freezing point of water.

• Journal of the Earthquake Engineering Society of Korea
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• v.27 no.2
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• pp.77-82
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• 2023

The structural analysis module is an essential part of any integrated structural system. Diverse integrated systems today require, from the analysis module, efficient real-time responses to real-time input such as earthquake signals, extreme weather-related forces, and man-made accidents. An integrated system may also be for the entire life span of a civil structure conceived during the initial conception, developed throughout various design stages, effectively used in construction, and utilized during usage and maintenance. All these integrated systems' essential part is the structural analysis module, which must be automated and computationally efficient so that responses may be almost immediate. The finite element method is often used for structural analysis, and for automation, many effective finite element meshes must be automatically generated for a given analysis. A computationally efficient finite element mesh generation scheme based on the r-h method of mesh refinement using strain deviations from the values at the Gauss points as error estimates from the previous mesh is described. Shape factors are used to sort out overly distorted elements. A standard cantilever beam analyzed by four-node plane stress elements is used as an example to show the effectiveness of the automated algorithm for a time-domain dynamic analysis. Although recent developments in computer hardware and software have made many new applications in integrated structural systems possible, structural analysis still needs to be executed efficiently in real-time. The algorithm applies to diverse integrated systems, including nonlinear analyses and general dynamic problems in earthquake engineering.

• Advances in nano research
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• v.17 no.4
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• pp.385-399
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• 2024

NEMS (Nano-Electro-Mechanical Systems) devices play a significant role in the advancement of prosthetic hands due to their unique properties at the nanoscale. Their integration enhances the functionality, sensitivity, and performance of prosthetic limbs. Understanding the electro-thermal buckling behavior of such structures is crucial since they may be subjected to extreme heat. So, in this paper, the two-dimensional hyperbolic differential quadrature method (2D-HDQM) integrated with a four-variable refined quasi-3D tangential shear deformation theory (RQ-3DTSDT) in view of the trace of thickness stretching is extended to study electro-thermal buckling response of three-directional poroelastic FG (3D-PFG) circular sector nanoplate patched with piezoelectric layer. Aimed at discovering the real governing equations, coupled equations with the aid of compatibility conditions are employed. Regarding modeling the size-impacts, nonlocal refined logarithmic strain gradient theory (NRLSGT) with two variables called nonlocal and length scale factors is examined. Numerical experimentation and comparison are used to indicate the precision and proficiency related to the created procedure. After obtaining the outputs of the mathematics, an appropriate dataset is used for testing, training and validating of the artificial intelligence. In the results section will be discussed the trace associated with multiple geometrical and physical factors on the electro-thermal buckling performance of the current nanostructure. These findings are essential for the design and optimization of NEMS applications in various fields, including sensing, actuation, and electronics, where thermal stability is paramount. The study's insights contribute to the development of more reliable and efficient NEMS devices, ensuring their robust performance under varying thermal conditions.

• Bulletin of the Society of Naval Architects of Korea
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• v.22 no.1
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• pp.45-53
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• 1985

For the analysis of vertical vibrations of a ship's hull, the Timoshenko beam analogy is accepted up to seven or eight-node modes provided that the system parameters are properly calculated. As to the shear coefficient, it has been a common practice to apply the strain energy method or the projected area method. The theoretical objection to the former is that it ignores lateral contraction due to Poisson's ratio, and the latter is of extreme simplifications. Recently, Cowper's and Stephen's shear coefficient formulas have drawn ship vibration analysts' attentions because these formulas, derivation of which are based on an integrations of the equations of three-dimensional elasticity, take Poisson's ratio into account. Providing computer programs for calculation of the shear coefficient of ship sections modeled as thin-walked multicell sections by each of the forementioned methods, the authors calculated natural vibration characteristics of a bulk carrier and of a container ship by the transfer matrix method using shear coefficients obtained by each of the methods, and discussed the results in comparision. The major conclusions resulted from this investigation are as follows: (1) The shear coefficients taking account of the effects of Poisson's ratio, Cowper's $K_c$ and Stephen's $K_s$, result in higher values of about 10% in maximum as compared with the shear coefficient $K_o$ based on the conventional strain energy methods; (a) $K_c/K_o{\cong}1.05\;and\;K_s/K_o{\cong}1.10$ for ships having single skin side-shell such as a bulk carrier. (b) $K_c/K_o{\cong}1.02\;and\;K_s/K_o{\cong}1.05$ for ships having longitudinally through bulkheads and/or double side-shells in the portion of the cargo hod such as a container carrier. (2) The distributions of the effective shear area along the ship's hull based on each of $K_o,\;K_c\;and\;K_s$ are similar each another except the both end portions. (3) Natural frequencies and mode shapes of the hull based on each of $K_c\;and\;K_s$ are of small differences as compared each other. (4) In cases of using $K_c\;or\;K_s$ in ship vibration analysis, it is also desirable to have the bending rigidity be corrected according to the effective breadth concept. And then, natural frequencies and mode shapes calculated with the bending rigidity corrected in the above and with each of $K_o,\;K_c\;and\;K_s$ result in small differences as compared each another. (5) Referring to those mentioned in the above (3) and (4) and to the full-scale experimental results reported by Asmussen et al.[17], and considering laboursome to prepare the computer input data, the following suggestions can safely be made; (a) Use of $K_o$ in ship vibration analysis is appropriate in practical senses. (b) Use of $K_c$ is appropriate even for detailed vibration analysis of a ship's hull. (6) The effective shear area based on the projected area method is acceptable for the two-node mode.

• Journal of the Korean Geotechnical Society
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• v.25 no.11
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• pp.105-115
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• 2009

The Jeju sand was sampled from the beach in Jeju Island and its basic properties were analyzed. The cementation effect of Jeju coastal sediments was evaluated from in-situ tests such as SPT, CPT, and the Suspension-PS test. It was shown from test results that the Jeju sand has high extreme void ratios due to the angularity of grains and the intra-particle voids of hollow particles, similar to typical calcareous sands. From cone penetration test in the calibration chamber, it was found that the cone resistance($q_c$)-relative density($D_R$)-vertical effective stress(${\sigma}_v'$) relation of Jeju sand almost matches that of high compressible quartz sand. However, the $q_C-D_R-{\sigma}_v'$ correlation suggested for uncemented Jeju sand overestimates the relative density of coastal sediments of Jeju Island due to the cementation effect. From the analysis of the relation of cone resistance, N value, and small strain shear modulus measured in-situ, it seems reasonable to assume that the coastal sediment of Jeju Island is a naturally cemented one.

• Journal of the Korea Concrete Institute
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• v.21 no.6
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• pp.705-712
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• 2009

HPFRCCs (high-performance fiber reinforced cementitious composites), which is relatively more ductile and has the characteristic of high toughness with high fiber volume fractions, can be used in structures subjected to extreme loads and exposed to durability problems. In the case of PVA (polyvinyl alcohol) fiber, it is noted by former studies that around 2% fiber volume fractions contributes to the most effective performance at HPFRCCs. In this study, flexural tests were carried out to evaluate the flexural behavior of HPFRCCs and to optimize mix proportions. Two sets of hybrid fiber reinforced high performance specimens with total fiber volume fraction of 2 % were tested: the first set prepared by addition of short and long PVA fibers at different combination of fiber volume fractions, and the second set by addition of steel. In addition, in order to assess the performances of the HPFRCCs against to high strain rates, drop weight tests were conducted. Lastly, the sprayed FRP was applied on the bottom surface of specimens to compare their impact responses with non-reinforcing specimens. The experimental results showed that the specimen prepared with 1.6% short fibers (REC 15) and 0.4% long fiber (RF4000) outperformed the other specimens under flexure, and impact loading.