• 제목/요약/키워드: evolution family

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Genomic Sequence Analysis and Organization of BmKαTx11 and BmKαTx15 from Buthus martensii Karsch: Molecular Evolution of α-toxin genes

  • Xu, Xiuling;Cao, Zhijian;Sheng, Jiqun;Wu, Wenlan;Luo, Feng;Sha, Yonggang;Mao, Xin;Liu, Hui;Jiang, Dahe;Li, Wenxin
    • BMB Reports
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    • 제38권4호
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    • pp.386-390
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    • 2005
  • Based on the reported cDNA sequences of $BmK{\alpha}Txs$, the genes encoding toxin $BmK{\alpha}Tx11$ and $BmK{\alpha}Tx15$ were amplified by PCR from the Chinese scorpion Buthus martensii Karsch genomic DNA employing synthetic oligonucleotides. Sequences analysis of nucleotide showed that an intron about 500 bp length interrupts signal peptide coding regions of $BmK{\alpha}Tx11$ and $BmK{\alpha}Tx15$. Using cDNA sequence of $BmK{\alpha}Tx11$ as probe, southern hybridization of BmK genome total DNA was performed. The result indicates that $BmK{\alpha}Tx11$ is multicopy genes or belongs to multiple gene family with high homology genes. The similarity of $BmK{\alpha}$-toxin gene sequences and southern hybridization revealed the evolution trace of $BmK{\alpha}$-toxins: $BmK{\alpha}$-toxin genes evolve from a common progenitor, and the genes diversity is associated with a process of locus duplication and gene divergence.

중국 국가이미지가 한국소비자의 상품평가 및 구매의도에 미치는 영향 (The Effects of China's Country Image on Korean Consumers' Product Evaluations and Purchase Intentions)

  • ;이승신
    • Human Ecology Research
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    • 제51권4호
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    • pp.455-472
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    • 2013
  • This paper's aim is to explore how China's country image affects the product evaluations and purchase intentions through three major hypothesize. Four hundred eighty-nine Korean adult consumers, who have the purchase experiences of goods made in China before, were invited to take part in this investigation. Data analyses were conducted by reliability test, confirmatory factor analysis and structural equation modeling with SPSS ver. 19.0 and AMOS ver. 18.0. This study focused on multi-dimensional country image and found that China's country image contains 5 elements (people, evolution, politic, economic and culture). Empirical verification through structural equation modeling indicates that the data offer substantial supports, such that China's country image represents the predominant influence on product evaluations and people, evolution, and politic image showed positive effects. Also, China's country image has a positive influence on the product purchase intentions directly (culture image) and indirectly (people, politics, and evolution image) through the product evaluations. Practical implications of findings will be discussed and suggested as follows. First, this study complements the lack of researches on China among the studies regarding country image. Secondly, research results would help us to understand the perception on China's country image of Korean consumers' and to seek the criteria by which consumers evaluate goods made in China. Finally, this research can help Chinese companies to make market strategies effectively when they entering Korean market by exploring the factors which have strong influences on Korean consumers' purchase behaviors.

어류치사성 Cochlodinium polykrikoides 적조생물의 유전적 진화 및 특성 (Genetic Evolution and Characteristics of Ichthyotoxic Cochlodinium polykrikoides(Gymnodiniales, Dinophyceae))

  • 조은섭;정창수
    • 생명과학회지
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    • 제17권11호
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    • pp.1453-1463
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    • 2007
  • 본 연구는 유해성 적조생물인 Cochlodinium polykrikoides의 유전적 계통진화를 설명하기 위하여 24 종의 개체에 대한 SSU을 대상으로 분석했다. C. polykrikoides는 와편모조류와 밀접한 단일 계통군을 형성하고 있다. Neighbor-joining 혹은 parsimony 분석에 의하면 C. polykrikoides는 Gymnodiniales 보다 Prorocentrals 목 (order)에 훨씬 근접한 100% 유연관계를 보이고 있으며, 과 (family)로 분석해 보면 Gymnodiniaceae에 속해 있고, 특히 Prorocentrum micans와는 매우 밀접한 관계를 보이고 있다. 형태적으로는 Gyrodinium속 (genus)에 가깝지만, 유전적으로는 Gymnodinium 속에 근접하고 있다. C. polykrikoides는 와편모조류 중에서 독립적인 계통군을 유지하고 있다. 따라서 p. micans는 Gymnodinium의 조상으로 추측되며, C. polykrikoides는 P. micans와 Gymnodinium 속의 중간단계인 것으로 보인다.

미토콘드리아 유전자, 치토그롬 옥시다제(subunit I)의 염기서열을 이용한 새치성게(Strongylocentrotus intermedius)의 진화과정 분석 (Evolution of sea Urchin Strongylocentrotus intermedius Based on DNA Sequences of a Mitochondrial Gene, Cytochrome c Oxidase Subunit I)

  • 이윤호
    • 한국해양학회지:바다
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    • 제5권2호
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    • pp.157-168
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    • 2000
  • 우리나라 동해안에 서식하는 새치성게(Strongylocentrotus intermedius)는 둥근성게과(Strongylocentrotidae)에 속하는 냉수성 해양 무척추동물이다. 둥근성게과에는 현재 9종의 성게가 속해 있으나, 아직 종간의 분류 기준, 계통 분류학적 유연관계, 진화과정 등이 잘 밝혀져 있지 않다. 본 연구는 유전자 염기서열이라는 분자형질을 이용하여 새치성게의 종 분류기준을 확립하고 이 종의 계통진화 및 분화 시기를 파악하고자 수행되었다. 이를 위하여 변화율이 빠르고 모계로만 유전되는 특성을 가진 미토콘드리아의 한 유전자인 cytochrome c oxidase subunit I(COI)을 분석하였다. 새치성게의 생식소에서 DNA를 추출하고 중합효소연쇄반응으로 COI 유전자 단편을 선택적으로 증폭하였으며, 클로닝과 시퀀싱 과정을 거쳐 COI 유전자의 단편 1077개 염기쌍 순서(염기서열)를 확정하였다. 이 염기서열과 유전자 데이터베이스(GenBank)에 들어있는 다른 성게 및 해삼, 불가사리의 유전자를 비교하고 그 분자 계통수를 작성함으로써 새치성게의 진화과정을 분석하였다. COI 유전자 계통수는 새치성게가 태평양 동쪽 연안에 서식하는 S. purpuratus와 계통적으로 자매군(sister species)의 관계에 있음을 보였다. 두 종의 분화 시기는 계통수 상 분지의 길이와 화석연대를 고려하여 산출했을 때 지구 온도의 변동이 심했던 약 890만년 전으로 추정되었다. 태평양의 동안과 서안으로 분리된 두 종의 현재 분포와 종분화 시기의 지구 환경조건은 두 종간의 분화가 환경변화에 따른 개체군의 지리적 분리(vicariance)에 의한 것임을 시사해 준다. 한편, 새치성게의 COI 유전자염기서열은 이 종을 대표하는 분자형질로서 둥근성게과의 성게들을 서로 구분할 수 있는 종분류의 기준이 될 것이다.

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Phylogenetic Diversity of Acidophilic Sporoactinobacteria Isolated from Various Soils

  • Cho, Sung-Heun;Han, Ji-Hye;Seong, Chi-Nam;Kim, Seung-Bum
    • Journal of Microbiology
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    • 제44권6호
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    • pp.600-606
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    • 2006
  • Spore forming actinobacteria (sporoactinobacteria) isolated from soils with an acidic pH in Pinus thunbergii forests and coal mine waste were subjected to taxonomic characterization. For the isolation of acidophilic actinobacteria, acidified starch casein agar (pH adjusted to 4-5) was used. The numbers of actinobacteria growing in acidic media were between $3.2{\times}10^4$ and $8.0{\times}10^6$ CFU/g soil. Forty three acidophilic actinobacterial strains were isolated and their 16S rDNA sequences were determined. The isolates were divided into eight distinctive phylogenetic clusters within the variation encompassed by the family Streptomycetaceae. Four clusters among them were assigned to the genus Streptacidiphilus, whereas the remaining four were assigned to Streptomyces. The clusters belonging to either Streptomyces or Streptacidiphilus did not form a monophyletic clade. The growth pH profiles indicated that the representative isolates grew best between pH 5 and 6. It is evident from this study that acidity has played a critical role in the differentiation of the family Streptomycetaceae, and also that different mechanisms might have resulted in the evolution of two groups, Streptacidiphilus (strict acidophiles) and neutrotolerant acidophilic Streptomyces. The effect of geographic separation was clearly seen among the Streptacidiphilus isolates, which may be a key factor in speciation of the genus.

기름종개과(Family Cobitidae) 어류의 계통분류에 관한 연구 8. Cobitis taeni complex mtDNA의 유전적 분화와 분류학적 위치 (Systematic Study on the Fishes of the Family Cobitidae (Pisces, Cypriniformes) 8.Mitochondrial DNA Differentiation and Taxonomic Status of the Cobitis taenia Complex)

  • 김재흡;민미숙;김종범;양서영
    • Animal Systematics, Evolution and Diversity
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    • 제13권1호
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    • pp.29-36
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    • 1997
  • 한국산 기름종개속 어류중 Cobitis taenia complex의 집단간 유전적 차이에 따른 종 분화 여부를 밝히고자 6개 집단을 대상으로 mitochondrial DNA(mtDNA)의 RFLP분석을 실 시하였다. C. taenia complex mtDNA를 10개의 6-base cutting 제한효소로 처리한 다음 그 절편 양상을 비교, 분석한 결과 6개 집단 공히 mtDNA 의 전체 genome 크기는 약 17.0$\pm$ 0.5Kbp였으며 공동절편수(F)에서 C. t. taenia 2개집단과 C. t. stria와 C. t. lutheri 4개 집단 간의 F값은 평균 0.263으로 차이가 있었으나, C. t. striata 와 C. t. lutheri 사이는 F=0.569로 가깝게 나타났다. 염기치환율 (p)에 있어 C. t. taenia는 C. t. striata 및 C. t. lutheri와 평균 p=0.082로 뚜렷한 종간차이를 보였으나, C. t. striata와 C. t. lutheri 집단들은 p=0.033으로 매우 가까운 유사성을 나타내었다. MtDNA 분석결과 C. taenia complex 중 C. t. taenia는 완전히 종분화가 이루어진 별종으로, C. t. striata와 C. t. lutherisms 아직 종수준의 분화가 이루어지지 않은 아종으로 분류함이 타당하다고 사료된다.

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한반도 구멍응애과 (진드기목, 중기문아목)의 분류학적 연구 (A Taxonomic Study of the Family Zerconidae(Acari.Mesostigmata) in the Korean Peninsula)

  • Lim, Jae-Won;Lee, Won-Koo
    • Animal Systematics, Evolution and Diversity
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    • 제17권2호
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    • pp.191-205
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    • 2001
  • 1994년 4월 2000년 5월까지 전국에서 구멍응애과 1.020개체를 채집하였으며 분류와 동정을 한 결과는 다음과 같이 8종으로 종에 대한 검색표를 작성하였다. 1. Echinozercon orientalis 가시구멍응애 2. Eurozercon pacificus 대양구멍응애(신칭) 3. Kaikiozercon mamillosus 가슴구멍응애(신칭) 4. Kaikiozercon peregrinus 청계구멍응애(신칭) 5. Koreozercon bacatus 진주구멍응애(신칭) 6. Mesozercon coeranus 고구려구멍응애 7. Mesozercon plumatus 솜털구멍응애 8. Zercon szeptyckii Blaszak, 1976 민구멍응애(신칭) 이중 Zercon szeptyckii는 23개 지역에서 600개체 이상을 채집하여 한반도에서 가장 흔히 분포하고, Mesozercon plumatus를 제외한 7종은 한국 미기록종이었다. 각 종에 대한 지리적 분포와 분류상의 문제점을 논의하였다.

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Formation of a New Solo-LTR of the Human Endogenous Retrovirus H Family in Human Chromosome 21

  • Huh, Jae-Won;Kim, Dae-Soo;Ha, Hong-Seok;Kim, Tae-Hong;Kim, Wook;Kim, Heui-Soo
    • Molecules and Cells
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    • 제22권3호
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    • pp.360-363
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    • 2006
  • Human endogenous retroviruses (HERVs) contribute to various kinds of genomic instability via rearrangement and retrotransposition events. In the present study the formation of a new human-specific solo-LTR belonging to the HERV-H family (AP001667; chromosome 21q21) was detected by a comparative analysis of human chromosome 21 and chimpanzee chromosome 22. The solo-LTR was formed as a result of an equal homologous recombination excision event. Several evolutionary processes have occurred at this locus during primate evolution, indicating that mammalian-wide interspersed repeat (MIR) and full-length HERV-H elements integrated into hominoid genomes after the divergence of Old World monkeys and hominoids, and that the solo-LTR element was created by recombination excision of the HERV-H only in the human genome.

누에 유래의 dpp 유전자의 기능 및 유전체 연구를 통한 식의약용 신소재로서 활용 (Function and use of silkworm dpp gene)

  • 박승원
    • 한국잠사곤충학회지
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    • 제54권1_2호
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    • pp.1-5
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    • 2016
  • The dpp gene originated from the silkworms is an important gene that is well conserved in the genome of humans, cattle, rodents, poultry and Drosophila. The dpp gene belonging to the TGF-beta (Transforming Growth Factor-beta) superfamily is known to play an important role in several developmental stages. The $TGF-{\beta}$ gene family is a genetically well-conserved and playing an important role gene family in various species such as determining cell proliferation and differentiation, apoptosis and cell fate. In this review, we have confirmed the following studies data. The recent studies on the silkworm dpp gene have confirmed for the first time the biological functions such as promoting osteogenesis activity. In addition, previous data shows that dpp have developmental functions such as morphogenetic materials at the blastophyllum stage, induction of the mesoblast at the late embryonic stage and involved in the proliferation and morphogenesis of imaginal disc in adult development. We found the splice variant of the dpp gene originated from the wildtype silkworm by using comparative genomics. It has provided important data for basic research based on genetics studies of these processes may promote a better understanding of evolution. Silkworm is a medicinal insect and is approved for its safety. It is used as a natural antibiotic for promoting growth as a medical material, a health functional food, and a feed additive. Therefore, it is necessary to present various data to obtain more value of functional insect.

Resistance to Turnip Mosaic Virus in the Family Brassicaceae

  • Palukaitis, Peter;Kim, Su
    • The Plant Pathology Journal
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    • 제37권1호
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    • pp.1-23
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    • 2021
  • Resistance to diseases caused by turnip mosaic virus (TuMV) in crop species of the family Brassicaceae has been studied extensively, especially in members of the genus Brassica. The variation in response observed on resistant and susceptible plants inoculated with different isolates of TuMV is due to a combination of the variation in the plant resistome and the variation in the virus genome. Here, we review the breadth of this variation, both at the level of variation in TuMV sequences, with one eye towards the phylogeny and evolution of the virus, and another eye towards the nature of the various responses observed in susceptible vs. different types of resistance responses. The analyses of the viral genomes allowed comparisons of pathotyped viruses on particular indicator hosts to produce clusters of host types, while the inclusion of phylogeny data and geographic location allowed the formation of the host/geographic cluster groups, the derivation of both of which are presented here. Various studies on resistance determination in particular brassica crops sometimes led to further genetic studies, in many cases to include the mapping of genes, and in some cases to the actual identification of the genes. In addition to summarizing the results from such studies done in brassica crops, as well as in radish and Arabidopsis (the latter as a potential source of candidate genes for brassica and radish), we also summarize work done using nonconventional approaches to obtaining resistance to TuMV.