• Title/Summary/Keyword: envelop (E)

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Transcription, Translation, and Immunolocalization of ODVP-6E/ODV-E56 and p74 Proteins: Two Highly Conserved ODV-associated Envelope Proteins of Choristoneura fumiferana Granulovirus

  • Rashidan, Kianoush Khajeh;Nassoury, Nasha;Giannopoulos, Paresa N.;Guertin, Claude
    • BMB Reports
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    • v.38 no.1
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    • pp.65-70
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    • 2005
  • Choristoneura fumiferana granulovirus (ChfuGV) infection results two types of enveloped virions: Occlusion-derived virus (ODV) and budded virus (BV). Structural proteins ODVP-6E/ODV-E56 and p74 are two major conserved ODV-associated proteins that may be involved in the initiation of viral infection cycle in susceptible host insect larvae. This study presents the characterization of ChfuGV odvp-6e/odv-e56 and p74 transcription and translation as well as immunolocalization of these proteins in the occluded ChfuGV virion. Our results revealed that the transcription of odvp-6e/odv-e56 and p74 genes, both, start at 24 hours post infection (h p.i.). Using monospecific polyclonal antibodies made against ODVP-6E/ODV-E56 and p74 we demonstrated that these proteins are both expressed late in infection (24 h p.i.). Immunogold labeling using antisera against ODVP-6E/ODV-E56 and p74 proteins demonstrated that ODVP-6E/ODV-E56 and p74 proteins are both associated with the ODV envelop of ChfuGV.

A New Hop-Timing Estimator with a Normalized Envelop Detector and an Early-Late Filter (정규화 포락선 검파기와 얼리-레이트 필터를 적용한 새로운 홉 타이밍 예측기)

  • Lee, Ju-Hyung
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.32 no.4C
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    • pp.355-361
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    • 2007
  • In this paper, the hop-timing estimator, which NED and ELF are adopted to, has been proposed. The estimation performance of the proposed scheme and the conventional scheme is compared through computer simulations. The simulation results show that the new system has less hop-timing error than the conventional system in partial band noise jamming channel. The lover Eb/Nj and ratio of jamming bandwidth(rho) we, the bigger performance enhancement of the proposed system is.

Damping Ratio Evaluation Using Long-Term Ambient Vibration (장기간 상시계측을 통한 감쇠율 평가)

  • Kim, Yong Chul;Yoon, Sung-Won
    • Journal of Korean Association for Spatial Structures
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    • v.18 no.1
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    • pp.77-84
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    • 2018
  • The identification of damping ratios in buildings is a well-known problem and appears to be of important and crucial interest in the safety and serviceability design. When compared to an estimation of the stiffness, i.e. natural frequency, and mass, the damping ratio is the most difficult quantity to determine. Many previous studies have examined the characteristics of damping ratios from ambient vibration, but the measurement time is roughly within 2 hours. In this paper, characteristics of damping ratios and natural frequencies of 4 story RC building were investigated using long-term ambient vibration. Free vibrations were obtained using random decrement technique, and damping ratios were evaluated by the envelop function, continuous wavelet transform, and logarithmic decrement. It was found that although the natural frequencies show little variations with time, the damping ratios show some variations with time and the largest variations found in the damping ratios obtained from the continuous wavelet transform. The damping ratios from the envelop function showed the smallest mean and standard deviation. And the probability distribution of damping ratios seems to follow the logarithmic normal distribution.

Cytopathic Effects of Japanese Encephalitis Virus Structural Proteins in BHK-21 Cells (BHK-21 세포에서의 일본뇌염바이러스 구조단백질에 의한 세포독성)

  • 성기민;정용석
    • Korean Journal of Microbiology
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    • v.38 no.3
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    • pp.213-220
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    • 2002
  • Inducible expression system for the three structural proteins, capsid (C), precursor membrane (prM/M), and envelop (E) of Japanese encephalitis virus (JEV) was established in BHK-21 cells. Doxycycline, a tetracycline analog, was utilized as an inducer. Transfectants BHK-21/IV (vector only), BHK-21/IC (for C), BHK-21/IP3 (for prM), and BHK-21/IE1 (for E) were selected and cloned in the presence of G4l8 or hygromycin. Transcribed mRNAs for the corresponding genes were observed after doxycycline induction. Effects by the JEV structural gene expression on the transfectants were monitored via cell growth, chromatin condensation, internucleosomal DNA fragmentation, and DNA contents analyses. Clear cell growth retardation and chromatin condensation were observed in all three transfectants while only BHK-2/IC corresponded to the induction status in the DNA fragmentation and DNA content analyses. Combined results, therefore, suggested that JEV capsid protein should be one of the direct and independent factors in apoptotic cell death induced by IEV infection.

Production of the Antiserum against Recombinant Envelop Protein, rVP466 for the Neutralization of White Spot Syndrome Virus (WSSV) (흰반점바이러스(WSSV)의 중화를 위한 재조합단백질 rVP466의 항혈청 생산)

  • Gong, Soo-Jung;Kim, Yeong-Jin;Choi, Mi-Ran;Kim, Sung-Koo
    • Journal of Life Science
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    • v.20 no.10
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    • pp.1427-1432
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    • 2010
  • This study was carried out to evaluate neutralization effects against WSSV using antiserum produced from recombinant envelop protein, rVP466 of WSSV. The VP466 gene of WSSV was cloned into pCold I expression vector and rVP466 was expressed in E. coli RIPL. The antiserum against rVP466 was produced in white rabbits (New Zealand white rabbit). The specific immunoreactivity to the antigen, rVP466, was confirmed by Western blot. The constant amounts of WSSV at $1{\times}10^4$ diluted stocks were mixed with various antiserum concentrations and then injected to the muscle of shrimp, Penaeus chinensis, for the neutralization challenge. The shrimps challenged with WSSV as a positive control and those with the mixture of WSSV and preimmune serum as a preimmune control showed 100% cumulative mortality at 17 days post challenge and 83% at 25 days post challenge, respectively. The shrimps challenged with 3 different mixtures of WSSV and rVP466 antiserum at ratios of 1:0.01, 1:0.1 and 1:1 showed 73%, 53% and 46% cumulative mortalities at 25 days post challenge, respectively. These results indicated that WSSV could be neutralized by the rVP466 antiserum. These results suggest that envelop protein VP466 is involved in the initial step of WSSV infection in shrimp.

Protective Immunity of Pichia pastoris-Expressed Recombinant Envelope Protein of Japanese Encephalitis Virus

  • Kwon, Woo-Taeg;Lee, Woo-Sik;Park, Pyo-Jam;Park, Tae-Kyu;Kang, Hyun
    • Journal of Microbiology and Biotechnology
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    • v.22 no.11
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    • pp.1580-1587
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    • 2012
  • Japanese encephalitis virus (JEV) envelope (E) protein holds great promise for use in the development of a recombinant vaccine. Purified recombinant E (rE) protein may be useful for numerous clinical applications; however, there are limitations in using the Escherichia coli expression system for producing high-quality rE protein. Therefore, in this study, the yeast expression system was used to generate the rE protein. For protein production using the yeast system, the full-length JEV E gene was cloned into Pichia pastoris. SDS-PAGE and immunoblotting analysis demonstrated that the rE protein had a molecular mass of 58 kDa and was glycosylated. The predicted size of the mature unmodified E protein is 53 kDa, suggesting that post-translational modifications resulted in the higher molecular mass. The rE protein was purified to greater than 95% purity using combined ammonium sulfate precipitation and a SP-Sepharose Fast Flow column. This purified rE protein was evaluated for immunogenicity and protective efficacy in mice. The survival rates of mice immunized with the rE protein were significantly increased over that of Hyphantria cunea nuclear polyhedrosis virus E protein (HcE). Our results indicate that the rE protein expressed in the P. pastoris expression system holds great promise for use in the development of a subunit vaccine against JEV.

Crystal and Molecular Structure of 4,6-Dimethyl-9-phenyl-8,12-dioxa-4,6-diazatetracyclo [8.8.0.02,7.013,18]octadeca-2(7),13,15,17-tetraene-3,5,11-trione 2-ethoxyphenyl (2E)-but-2-enoate

  • Ganapathy, Jagadeesan;Damodharan, Kannan;Manickam, Bakthadoss;Sanmargam, Aravindhan
    • Journal of Integrative Natural Science
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    • v.6 no.4
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    • pp.197-204
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    • 2013
  • The crystal structure of the potential active 4,6-dimethyl-9-phenyl-8,12-dioxa-4,6-diazatetracyclo [8.8.0.02,7.013,18] octadeca-2(7),13,15,17-tetraene-3,5,11-trione 2-ethoxyphenyl (2E)-but-2-enoate ($C_{22}H_{18}N_2O_5$) has been determined from single crystal X-ray diffraction data. In the title compound crystallizes in the monoclinic space group $P_12_1/c_1$ with unit cell dimension a=15.2039(8), b=12.3888(6) and c= 9.8162(5) [alpha & $gamma=90^{\circ}$ beta=98.113(2)]. In the structure fused pyrone and pyran rings each adopt a sofa/envelop conformation. The crystal structure is stabilized by intramolecular C-H... O hydrogen bond interaction.

Generalization of the Extreme Floods for Various Sizes of Ungauged Watersheds Using Generated Streamflow Data (생성된 유량자료를 활용한 미계측유역 극한 홍수 범위 일반화)

  • Yang, Zhipeng;Jung, Yong
    • KSCE Journal of Civil and Environmental Engineering Research
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    • v.42 no.5
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    • pp.627-637
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    • 2022
  • To know the magnitudes of extreme floods for various sizes of watersheds, massive streamflow data is fundamentally required. However, small/medium-size watersheds missed streamflow data because of the lack of gauge stations. In this study, the Streamflow Propagation Method (SPM) was applied to generate streamflow data for small/medium size watersheds with no measurements. Based on the generated streamflow data for ungauged watersheds at three different locations (i.e., Chungju Dam (CJD), Seomjin Dam (SJD), and Andong Dam (ADD) watersheds), the scale ranges of extreme floods were evaluated for different sizes of ungauged watersheds by using the specific flood distribution analysis. As a general result, a range of specific floods decreases with increasing watershed size. The distribution of the specific flood in the same size of a watershed possibly depends on the size and topography of the watershed area. The delivered equations were compared to show the relations between the specific flood and sizes of watersheds. In the comparisons of equations, the Creager envelope curve has the higher potential to represent the maximum flood distribution for each watershed. For the generalization of the maximum flood distribution for three watersheds, optimized envelop curves are obtained with lower RMSE than that of Creager envelope curve.

Ultrastructural observation of human neutrophils during apoptotic cell death triggered by Entamoeba histolytica

  • Sim, Sco-Bo;Kim, Kyeong-Ah;Yong, Tai-Soon;Park, Soon-Jung;Im, Kyung-Il;Shin, Myeong-Heon
    • Parasites, Hosts and Diseases
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    • v.42 no.4
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    • pp.205-208
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    • 2004
  • Neutrophils are important effector cells against protozoan extracellular parasite Entamoeba histolytica, which causes amoebic colitis and liver abscess in human beings. Apoptotic cell death of neutrophils is an important event in the resolution of inflammation and parasite's survival in vivo. This study was undertaken to investigate the ultrastructural aspects of apoptotic cells during neutrophil death triggered by Entamoeba histolytica. Isolated human neutrophils from the peripheral blood were incubated with or without live trophozoites of E. histolytica and examined by transmission electron microscopy (TEM). Neutrophils incubated with E. histolytica were observed to show apoptotic characteristics, such as compaction of the nuclear chromatin and swelling of the nuclear envelop. In contrast, neutrophils incubated in the absence of the amoeba had many protrusions of irregular cell surfaces and heterogenous nuclear chromatin. Therefore, it is suggested that Entamoeba-induced neutrophil apoptosis contribute to prevent unwanted tissue inflammation and damage in the amoeba-invaded lesions in vivo.

SARS-CoV-2 Delta (B.1.617.2) Variant: A Unique T478K Mutation in Receptor Binding Motif (RBM) of Spike Gene

  • Hyunjhung Jhun;Ho-Young Park;Yasmin Hisham;Chang-Seon Song;Soohyun Kim
    • IMMUNE NETWORK
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    • v.21 no.5
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    • pp.32.1-32.14
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    • 2021
  • Over two hundred twenty-eight million cases of coronavirus disease 2019 (COVID-19) in the world have been reported until the 21st of September 2021 after the first rise in December 2019. The virus caused the disease called severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Over 4 million deaths blame COVID-19 during the last one year and 8 months in the world. Currently, four SARS-CoV-2 variants of concern are mainly focused by pandemic studies with limited experiments to translate the infectivity and pathogenicity of each variant. The SARS-CoV-2 α, β, γ, and δ variant of concern was originated from United Kingdom, South Africa, Brazil/Japan, and India, respectively. The classification of SARS-CoV-2 variant is based on the mutation in spike (S) gene on the envelop of SARS-CoV-2. This review describes four SARS-CoV-2 α, β, γ, and δ variants of concern including SARS-CoV-2 ε, ζ, η, ι, κ, and B.1.617.3 variants of interest and alert. Recently, SARS-CoV-2 δ variant prevails over different countries that have 3 unique mutation sites: E156del/R158G in the N-terminal domain and T478K in a crucial receptor binding domain. A particular mutation in the functional domain of the S gene is probably associated with the infectivity and pathogenesis of the SARS-CoV-2 variant.