• 제목/요약/키워드: differential screening

검색결과 146건 처리시간 0.024초

팽이버섯의 자실체형성 초기과정에서 특이적으로 발현하는 유전자의 클로닝 (Cloning of a Gene Specifically Expressed During Early Stage of Fruiting Body Formation in Flammulina velutipes)

  • 김둘이;동지칙
    • 한국균학회지
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    • 제27권3호통권90호
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    • pp.187-190
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    • 1999
  • 팽이버섯의 자실체 분화 과정에서 특이적으로 발현하는 유전자 분리를 위한 cDNA library는 발이처리 후 7일째 배양한 균사체의 mRNA에 의해 만들어졌다. cDNA클론 FVFD16(Flammulina velutipes fruiting body differentiation)은 자실체 분화 과정에서 특이적으로 발현되는 클론으로 differential screening에 의해 선발되었다. Northern 분석에 의해 FVFD16의 발현 특성을 관찰한 결과, 1일과 4일째의 균사체에서 현저한 발현량을 나타내었다. FVFD16의 염기 서열을 검색한 결과, FVFD16의 mRNA는 open reading frame을 포함한 128의 아미노산 잔기(13.5kDa)를 가진 단백질로 추정되었다.

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공간적 확률 과정 기반의 수율 정보를 이용한 번인과 신뢰성 검사 정책 (Differential Burn-in and Reliability Screening Policy Using Yield Information Based on Spatial Stochastic Processes)

  • 황정윤;심영학
    • 산업경영시스템학회지
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    • 제35권4호
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    • pp.1-9
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    • 2012
  • Decisions on reliability screening rules and burn-in policies are determined based on the estimated reliability. The variability in a semiconductor manufacturing process does not only causes quality problems but it also makes reliability estimation more complicated. This study investigates the nonuniformity characteristics of integrated circuit reliability according to defect density distribution within a wafer and between wafers then develops optimal burn-in policy based on the estimated reliability. New reliability estimation model based on yield information is developed using a spatial stochastic process. Spatial defect density variation is reflected in the reliability estimation, and the defect densities of each die location are considered as input variables of the burn-in optimization. Reliability screening and optimal burn-in policy subject to the burn-in cost minimization is examined, and numerical experiments are conducted.

신생아 대사질환 선별검사에서 발견된 갈락토스혈증의 감별진단 (Differential Diagnosis of Galactosemia Detected by Neonatal Screening)

  • 최성윤;송웅주;임한혁;길홍량;김숙자
    • 대한유전성대사질환학회지
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    • 제13권2호
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    • pp.89-97
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    • 2013
  • Purpose: We retrospectively investigated individuals who hadbeen identified by neonatal screening as potential galactosemia patients to determine the etiology of galactosemia. Methods: One hundred fifty-three patients referred to Korea Genetics Research Center due to high galactose level detected by neonatal screening test between February 2005 and May 2013 were examined. Galactose and galactose-1-phosphate levels were measured by using a fluoro metric microplate reader. Lactose free diet was initiated immediately after confirmed by urine Clinitest. If reducing sugar was negative, we employed abdominal sonogram and echocardiogram to check for possible porto-systemic shunt. Results: Fifteen patients were diagnosed with galactosemia. One patient had galactokinase (GALK) deficiency; four had UDP galactose-4-epimerase (GALE) deficiency; two had citrin deficiency; and four had porto-systemic shunt. Two had unknown causes of galactosemia. Conclusion: In addition to genetic defects of GALT, GALK and GALE, citrin deficiency or porto-systemic shunt could also cause galactosemia. It is crucial to carry out differential diagnosis to determine the cause of galactosemia.

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복합방진벽에 의한 Rayleigh파의 차단 (Screening of Rayleigh Waves by Composite Barriers)

  • 이종세
    • 한국지진공학회:학술대회논문집
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    • 한국지진공학회 1997년도 추계 학술발표회 논문집 Proceedings of EESK Conference-Fall 1997
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    • pp.133-140
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    • 1997
  • Based on the Green's function technique, an analytical approach is developed to examine the surface wave screening effectiveness of composite wave barriers. The composite barrier consists of a high velocity layer sandwiched between two thin layers of low shear velocity materials. The high velocity layer is represented by differential matrix operators which relate the wave fields on each side of the layer. The low velocity layers are modeled by non-rigid contact conditions which allow partial sliding at the interfaces. Screening ratio of barriers with various combination of material, geometric, and non-rigidness parameters are compared and discussed in some detail.

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벼 (Oryza sativa L.)배양세포의 고중력유도성 cDNA의 탐색 (Screening of Gravity Inducible cDNAs in Rice(Oryza sativa L.) Cultured Cell)

  • 권순태;김길웅
    • 식물조직배양학회지
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    • 제21권2호
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    • pp.111-115
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    • 1994
  • 벼(Oryza sativa L. cv Nipponbaie)배양세포에 중력 450,000 x g를 처리하여 cDNA library를 만들고, 무처리 및 고중력을 처리한 cDNA 프로브로 스크리닝을 실시하여 고중력에 특이적으로 양성반응을 나타내는 GSC 13 및 GSC124 cDNA를 선발하였다. 선발된 두 유전자 GSC 13 및 GSC 124의 길이는 각각 1.34 및 0.67 kilobase pairs였으며, 배양세포내에서 관련된 transcript의 크기는 각각 2.0 및 1.9 kilobase pairs인 것으로 나타났다. 두 유전자를 프로브로한 Northern hybridization을 실시한 결과 GSC 13, GSC 124 공히 배양세포내에 고중력처리에 의해 특이적으로 축적되는 mRNA가 나타났으며, 중력강도 300,000 x g 에 비해 450,000 x g 처리에서 더욱 강한 축적을 보였고 450,000 x g 4시간 처리에서 최대의 수준을 보였다.

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Screening of Differential Promoter Hypermethylated Genes in Primary Oral Squamous Cell Carcinoma

  • Khor, Goot Heah;Froemming, Gabrielle Ruth Anisah;Zain, Rosnah Binti;Abraham, Mannil Thomas;Thong, Kwai Lin
    • Asian Pacific Journal of Cancer Prevention
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    • 제15권20호
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    • pp.8957-8961
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    • 2014
  • Background: Promoter hypermethylation leads to altered gene functions and may result in malignant cellular transformation. Thus, identification of biomarkers for hypermethylated genes could be useful for diagnosis, prognosis, and therapeutic treatment of oral squamous cell carcinoma (OSCC). Objectives: To screen hypermethylated genes with a microarray approach and to validate selected hypermethylated genes with the methylation-specific polymerase chain reaction (MSPCR). Materials and Methods: Genome-wide analysis of normal oral mucosa and OSCC tissues was conducted using the Illumina methylation microarray. The specified differential genes were selected and hypermethylation status was further verified with an independent cohort sample of OSCC samples. Candidate genes were screened using microarray assay and run by MSPCR analysis. Results: TP73, PIK3R5, and CELSR3 demonstrated high percentages of differential hypermethylation status. Conclusions: Our microarray screening and MSPCR approaches revealed that the signature candidates of differentially hypermethylated genes may possibly become potential biomarkers which would be useful for diagnostic, prognostic and therapeutic targets of OSCC in the near future.

약용버섯번데기 동충하초 MET7903의 특이적 자실체형성 유전자의 선별 (Screening of Fruiting Body Formation-Specific Genes from the Medicinal Mushroom Cordyceps militaris MET7903)

  • 윤방웅;정기철
    • 한국버섯학회지
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    • 제2권3호
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    • pp.145-148
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    • 2004
  • 이 연구는 약용버섯 번데기 동충하초로부터 특이적 자실체 형성 유전자를 선별하기 위하여 수행하였다. cDNA는 버섯의 분화 4단계 균사체, 원기, 미성숙 자실체, 성숙한 자실체로부터 분리한 각각의 total RNA를 이용하여 합성하였다. 특이적으로 발현된 유전자의 선별은 cDNA와 랜덤한 primer set을 이용한 DD-PCR에 의해 수행되었고, pGEM 클로닝 벡터를 이용하여 6개의 partial 유전자 서열을 확인하였다. 6개의 DD-PCR product는 보고된 유전자와 유사도를 확인하기 위해 NCBI BLAST search를 사용하여 GenBank에서 비교하였고, 6개의 유전자는 보고되지 않은 유전자임을 확인하였다.

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Isolation of Defense-Related Genes from Nicotiana glutinosa Infected by Tobacco Mosaic Virus Using a Modified Differential Screening

  • Park, Kyung-Soon;Suh, Mi-Chung;Cheong, Jong-Joo;Park, Doil
    • The Plant Pathology Journal
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    • 제15권5호
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    • pp.295-301
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    • 1999
  • Many of plant defense responses are consequence of transcriptional activation of related genes. We have developed a modified differential screening procedure to isolate tobacco genes that are involved in the defense responses against TMV infection. A cDNA library was constructed from Nicotiana glutinosa leaves infected by TMV under temperature shift conditions. Each of plasmid DNA in the library was hybridized on a set of slot blots to a pool of cDNA probes prepared from either TMV-infected or mock-treated tobacco leaves. Among 900 plasmid DNAs, 81 clones exhibiting significantly enhanced or reduced level of hybridization to either probe were selected for nucleotide sequencing. The clones were listed into 61 genes considering redundancy between the sequences. The genes were identified to be defense-related genes including PR-genes and genes involved in primary or secondary metabolisms. This results supports the implication that plant defense process entails a major shift in total cellular metabolisms rather than activation of a limited number of defense-related genes. Expression patterns of a number of defense-related genes. Expression patterns of a number of selected genes were examined in northern blot analyses. It is notable that the clone 630 of unknown function exhibits expression pattern similar to those of previously known PR-genes. Experiments to elucidate the roles in defense mechanism of a couple of genes newly identified in this study are in progress.

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소아 빈혈의 감별진단 및 치료 (Differential Diagnosis and Treatment of Anemia in Children)

  • 임영탁
    • Clinical and Experimental Pediatrics
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    • 제48권2호
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    • pp.121-125
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    • 2005
  • Anemia can be defined as a reduction in blood hemoglobin concentration or red cell mass relative to age matched normal values. Clinical presentation may range from obviously pale and lethargy to an incidental finding during screening of an otherwise well appearing child. The differential diagnosis of anemia in each instance is broad with numerous possible etiologies. A careful history and physical examination as well as complete blood count, peripheral blood smear and additional laboratory tests are necessary in defining underlying cause of the anemia and guide in further treatment plans. In addition, Iron deficiency anemia and anemia of inflammation are common causes of mild to moderate anemia in children, but most pediatricians have some confusions to differentiate these two entities.

근세포 분화에 관한 연구: 차별 혼성화 스크리닝법에 의한 근원세포 분화 관련 유전자의 클로닝 (Studies on the differentiation of Myoblasts: Molecular Cloning of differentiation related Genes in the Chick Embryonic Myoblasts by Differential Hybridization.)

  • 강봉석;장세헌유병제양재섭
    • 한국동물학회지
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    • 제37권2호
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    • pp.240-248
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    • 1994
  • 골격근 세포는 미분화 단핵 근원세포로부터 신장과 융합을 거쳐 다핵 횡문근섬유로 분화되어 가며 동시에 근특이 유전자의 발현이 선택적으로 일어난다. 본 연구에서는 계배 배양 근원세포의 분화동안 유전자 발현 조절 양상에 대한 연구를 위해, 계배 근원세포를 72시간 배양한 근섬유로부터 CDNA 라이브러리를 제작하였다. 이 cDNA 라이브러리를 미분화 단핵 근원세포(배양 36시간)와 분화된 다핵 근섬유(배양 72시간)의 poly(A)+ RNA 주형에서 합성된 [32P〕cDNA를 Probe로 사용한 differential plaque hybridization 방법으로 스크리닝하였다 분화된 다핵 근섬유 CDNA probe에 강한게 흔성화되는 CDNA clone을 선별하여 클로닝하였다. 선별한 CDNA clone 들 중 하나는 약 1.3 Kb 크기의 삽입절편을 갖고 있는 것으로 나타났고, 이 CDNA를 probe로 사용하여 northern blotting 한 결과, 이 CDNA엑 대한 유전자는 미분화 단핵 근원세포에서 분화된 다핵 근섬유로 분화가 진행됨에 따라 유전자 산물인 RNA 양이 증가되는 것으로 나타났다 또한 이 1.3 Kb CDNA에 대한 RNA의 크기는 약 2 7 Kb로 확인되었다.

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