• Communications for Statistical Applications and Methods
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• v.29 no.5
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• pp.591-601
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• 2022

In gene set analysis with microarray expression data, a group of genes such as a gene regulatory pathway and a signaling pathway is often tested if there exists either differentially expressed (DE) or differentially co-expressed (DC) genes between two biological conditions. Recently, a statistical test based on covariance estimation have been proposed in order to identify DC genes. In particular, covariance regularization by hard thresholding indeed improved the power of the test when the proportion of DC genes within a biological pathway is relatively small. In this article, we compare covariance thresholding methods using four different regularization penalties such as lasso, hard, smoothly clipped absolute deviation (SCAD), and minimax concave plus (MCP) penalties. In our extensive simulation studies, we found that both SCAD and MCP thresholding methods can outperform the hard thresholding method when the proportion of DC genes is extremely small and the number of genes in a biological pathway is much greater than a sample size. We also applied four thresholding methods to 3 different microarray gene expression data sets related with mutant p53 transcriptional activity, and epithelium and stroma breast cancer to compare genetic pathways identified by each method.

• Geomechanics and Engineering
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• v.9 no.1
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• pp.101-113
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• 2015

Saturated soil hydraulic conductivity is a very important soil parameter in numerous practical engineering applications, especially rainfall infiltration and slope stability problems. This parameter is difficult to measure since it is very highly sensitive to various soil conditions. There have been many analytical and empirical formulas to predict saturated soil hydraulic conductivity based on experimental data. However, there have been few studies to investigate in-situ hydraulic conductivity of weathered granite soils, which constitute the majority of soil slopes in Korea. This paper introduces an estimation method to derive saturated hydraulic conductivity of Korean weathered granite soils using in-situ experimental data which were obtained from a variety of slope areas of South Korea. A robust regression analysis was performed using different physical soil properties and an empirical solution with an $R^2$ value of 0.9193 was suggested. Besides that this research validated the proposed model by conducting in-situ saturated soil hydraulic conductivity tests in two slope areas.

• Communications for Statistical Applications and Methods
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• v.25 no.3
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• pp.283-296
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• 2018

Ranked set sampling, as introduced by McIntyre (Australian Journal of Agriculture Research, 3, 385-390, 1952), dealt with the estimation of the mean of one population. To deal with two or more variables, different forms of bivariate and multivariate ranked set sampling were suggested. For a technique to be useful, it should be easy to implement in practice. Bivariate ranked set sampling, as introduced by Al-Saleh and Zheng (Australian & New Zealand Journal of Statistics, 44, 221-232, 2002), is not easy to implement in practice, because it requires the judgment ranking of each of the combination of the order statistics of the two characteristics. This paper investigates two modifications that make the method easier to use. The first modification is based on ranking one variable and noting the rank of the other variable for one cycle, and do the reverse for another cycle. The second approach is based on ranking of one variable and giving the second variable the same rank (Concomitant Order Statistic) for one cycle and do the reverse for the other cycle. The two procedures are investigated for an estimation of the means of some well-known distributions. It is show that the suggested approaches can be used in practice and can be more efficient than using SRS. A real data set is used to illustrate the procedure.

• Communications for Statistical Applications and Methods
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• v.19 no.5
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• pp.697-704
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• 2012

The maximum likelihood(ML) estimation of the scale parameters of an exponential distribution based on progressive Type II censored samples is given. The sample is multiply censored (some middle observations being censored); however, the ML method does not admit explicit solutions. In this paper, we propose multiply progressive Type II censoring. This paper presents the statistical inference on the scale parameter for the exponential distribution when samples are multiply progressive Type II censoring. The scale parameter is estimated by approximate ML methods that use two different Taylor series expansion types ($AMLE_I$, $AMLE_{II}$). We also obtain the maximum likelihood estimator(MLE) of the scale parameter under the proposed multiply progressive Type II censored samples. We compare the estimators in the sense of the mean square error(MSE). The simulation procedure is repeated 10,000 times for the sample size n = 20 and 40 and various censored schemes. The $AMLE_{II}$ is better than MLE and $AMLE_I$ in the sense of the MSE.

• Advances in Computational Design
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• v.4 no.3
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• pp.307-326
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• 2019

A low computational cost semi-analytical method is developed, based on eigenfunction expansion, to study the vibration of rectangular plates subjected to a series of moving sprung masses, representing a bridge deck under multiple vehicle or train moving loads. The dynamic effects of the suspension system are taken into account by using flexible connections between the moving masses and the base structure. The accuracy of the proposed method in predicting the dynamic response of a rectangular plate subjected to a series of moving sprung masses is demonstrated compared to the conventional rigid moving mass models. It is shown that the proposed method can considerably improve the computational efficiency of the conventional methods by eliminating a large number of time-varying components in the coupled Ordinary Differential Equations (ODEs) matrices. The dynamic behaviour of the system is then investigated by performing a comprehensive parametric study on the Dynamic Amplification Factor (DAF) of the moving loads using different design parameters. The results indicate that ignoring the flexibility of the suspension system in both moving force and moving mass models may lead to substantially underestimated DAF predictions and therefore unsafe design solutions. This highlights the significance of taking into account the stiffness of the suspension system for accurate estimation of the plate maximum dynamic response in practical applications.

• International Journal of Computer Science & Network Security
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• v.23 no.9
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• pp.157-161
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• 2023

Reliability is one of the computable quality features of the software. To assess the reliability the software reliability growth models(SRGMS) are used at different test times based on statistical learning models. In all situations, Tradational time-based SRGMS may not be enough, and such models cannot recognize errors in small and medium sized applications.Numerous traditional reliability measures are used to test software errors during application development and testing. In the software testing and maintenance phase, however, new errors are taken into consideration in real time in order to decide the reliability estimate. In this article, we suggest using the Weibull model as a computational approach to eradicate the problem of software reliability modeling. In the suggested model, a new distribution model is suggested to improve the reliability estimation method. We compute the model developed and stabilize its efficiency with other popular software reliability growth models from the research publication. Our assessment results show that the proposed Model is worthier to S-shaped Yamada, Generalized Poisson, NHPP.

• Geomechanics and Engineering
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• v.30 no.2
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• pp.187-199
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• 2022

Kriging metamodel, as a flexible machine learning method for approximating deterministic analysis models of an engineering system, has been widely used for efficiently estimating slope reliability in recent years. However, the autocorrelation function (ACF), a key input to Kriging that affects the accuracy of reliability estimation, is usually selected based on empiricism. This paper proposes an adaption of the Kriging method, named as Genetic Algorithm optimized Whittle-Matérn Kriging (GAWMK), for addressing this issue. The non-classical two-parameter Whittle-Matérn (WM) function, which can represent different ACFs in the Matérn family by controlling a smoothness parameter, is adopted in GAWMK to avoid subjectively selecting ACFs. The genetic algorithm is used to optimize the WM model to adaptively select the optimal autocorrelation structure of the GAWMK model. Monte Carlo simulation is then performed based on GAWMK for a subsequent slope reliability analysis. Applications to one explicit analytical example and two slope examples are presented to illustrate and validate the proposed method. It is found that reliability results estimated by the Kriging models using randomly chosen ACFs might be biased. The proposed method performs reasonably well in slope reliability estimation.

• Communications for Statistical Applications and Methods
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• v.27 no.4
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• pp.413-430
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• 2020

The multiply Type-II hybrid censoring scheme is disadvantaged by an experiment time that is too long. To overcome this limitation, we propose a generalized multiply Type-II hybrid censoring scheme. Some estimators of the scale parameter of the exponential distribution are derived under a generalized multiply Type-II hybrid censoring scheme. First, the maximum likelihood estimator of the scale parameter of the exponential distribution is obtained under the proposed censoring scheme. Second, we obtain the Bayes estimators under different loss functions with a noninformative prior and an informative prior. We approximate the Bayes estimators by Lindleys approximation and the Tierney-Kadane method since the posterior distributions obtained by the two priors are complicated. In addition, the Bayes estimators are obtained by using the Markov Chain Monte Carlo samples. Finally, all proposed estimators are compared in the sense of the mean squared error through the Monte Carlo simulation and applied to real data.

• Water for future
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• v.28 no.1
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• pp.133-144
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• 1995

The subject of the paper is the selection of the number and location of rainguage stations among existing ones, which will be part of real-time data collection system, for the computation of mean areal precipitation and for use as input of real-time flow forecasting models. The weighted average method developed by National Weather Service was used to compute MAP. Two different searching methods were used to find local optimal solutions as a function of the number of rainguages. An operational rainfall-runoff model was used to determine the optimal location and number of stations for flow prediction.

• Proceedings of the KOSOMBE Conference
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• v.1991 no.05
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• pp.65-70
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• 1991

A hybrid model which uses a probabilistic model and a MLP(multi layer perceptron) model for pattern recognition of EMG(electromyogram) signals is proposed in this paper. MLP model has problems which do not guarantee global minima of error due to learning method and have different approximation grade to bayesian probabilities due to different amounts and quality of training data, the number of hidden layers and hidden nodes, etc. Especially in the case of new test data which exclude design samples, the latter problem produces quite different results. The error probability of probabilistic model is closely related to the estimation error of the parameters used in the model and fidelity of assumtion. Generally, it is impossible to introduce the bayesian classifier to the probabilistic model of EMG signals because of unknown priori probabilities and is estimated by MLE(maximum likelihood estimate). In this paper we propose the method which get the MAP(maximum a posteriori probability) in the probabilistic model by estimating the priori probability distribution which minimize the error probability using the MLP. This method minimize the error probability of the probabilistic model as long as the realization of the MLP is optimal and approximate the minimum of error probability of each class of both models selectively. Alocating the reference coordinate of EMG signal to the outside of the body make it easy to suit to the applications which it is difficult to define and seperate using internal body coordinate. Simulation results show the benefit of the proposed model compared to use the MLP and the probabilistic model seperately.