• Title/Summary/Keyword: database

Search Result 18,804, Processing Time 0.043 seconds

DNA Chip Database for the Korean Functional Genomics Project

  • Kim, Sang-Soo
    • Proceedings of the Korean Society for Bioinformatics Conference
    • /
    • 2001.10a
    • /
    • pp.11-28
    • /
    • 2001
  • The Korean functional Genomics Project focuses on stomach and liver cancers. Specimens collected by six hospital teams are used in BNA microarray experiments. Experimental conditions, spot measurement data, and the associated clinical information are stored in a relational database. Microarray database schema was developed based on EBI's ArrayExpress. A diagrammatic representation of the schema is used to help navigate over marty tables in the database. Field description, table-to-table relationship, and other database features are also stored in the database and these are used by a PERL interface program to generate web-based input forms on the fly. As such, it is rather simple to modify the database definition and implement controlled vocabularies. This PERL program is a general-purpose utility which can be used for inputting and updating data in relational databases. It supports file upload and user-supplied filters of uploaded data. Joining related tables is implemented using JavaScripts, allowing this step to be deferred to a later stage. This feature alleviates the pain of inputting data into a multi-table database and promotes collaborative data input among several teams. Pathological finding, clinical laboratory parameters, demographical information, and environmental factors are also collected and stored in a separate database. The same PERL program facilitated developing this database and its user-interface.

  • PDF

Proteomics Data Analysis using Representative Database

  • Kwon, Kyung-Hoon;Park, Gun-Wook;Kim, Jin-Young;Park, Young-Mok;Yoo, Jong-Shin
    • Bioinformatics and Biosystems
    • /
    • v.2 no.2
    • /
    • pp.46-51
    • /
    • 2007
  • In the proteomics research using mass spectrometry, the protein database search gives the protein information from the peptide sequences that show the best match with the tandem mass spectra. The protein sequence database has been a powerful knowledgebase for this protein identification. However, as we accumulate the protein sequence information in the database, the database size gets to be huge. Now it becomes hard to consider all the protein sequences in the database search because it consumes much computing time. For the high-throughput analysis of the proteome, usually we have used the non-redundant refined database such as IPI human database of European Bioinformatics Institute. While the non-redundant database can supply the search result in high speed, it misses the variation of the protein sequences. In this study, we have concerned the proteomics data in the point of protein similarities and used the network analysis tool to build a new analysis method. This method will be able to save the computing time for the database search and keep the sequence variation to catch the modified peptides.

  • PDF

Database Schema Design for Integrated Missile Design and Optimization (유도무기 통합최적설계를 위한 데이터베이스 설계 연구)

  • Lee, Jae-Woo;Lee, Seung-Jin;Choi, Seok-Min;Cho, Guk-Hyun;Kim, Kwang-Sik;Lee, Jeong-Oog;Jung, Karp-Joo
    • Journal of the Computational Structural Engineering Institute of Korea
    • /
    • v.21 no.6
    • /
    • pp.563-569
    • /
    • 2008
  • In this paper, the missile database system for the multidisciplinary design and optimization framework has been designed and investigated. The requirements of the missiles database are analyzed and the database design concept has been defined first. The data flow among the analysis disciplines is investigated and the Entity-Relation diagram is constructed to develop the database table and to define the database schema. The developed database system is integrated into the missile design framework to perform the store, search and management of the design data during the design and analysis of the missile development, hence the efficiency and validity of the database designed in this study has been demonstrated.

A Fully Distributed Secure Approach using Nondeterministic Encryption for Database Security in Cloud

  • Srinu Banothu;A. Govardhan;Karnam Madhavi
    • International Journal of Computer Science & Network Security
    • /
    • v.24 no.1
    • /
    • pp.140-150
    • /
    • 2024
  • Database-as-a-Service is one of the prime services provided by Cloud Computing. It provides data storage and management services to individuals, enterprises and organizations on pay and uses basis. In which any enterprise or organization can outsource its databases to the Cloud Service Provider (CSP) and query the data whenever and wherever required through any devices connected to the internet. The advantage of this service is that enterprises or organizations can reduce the cost of establishing and maintaining infrastructure locally. However, there exist some database security, privacychallenges and query performance issues to access data, to overcome these issues, in our recent research, developed a database security model using a deterministic encryption scheme, which improved query execution performance and database security level.As this model is implemented using a deterministic encryption scheme, it may suffer from chosen plain text attack, to overcome this issue. In this paper, we proposed a new model for cloud database security using nondeterministic encryption, order preserving encryption, homomorphic encryptionand database distribution schemes, andour proposed model supports execution of queries with equality check, range condition and aggregate operations on encrypted cloud database without decryption. This model is more secure with optimal query execution performance.

서지데이터베이스의 품질관리-K관의 MARC레코드 분석을 중심으로 -

  • 김지훈
    • Journal of Korean Library and Information Science Society
    • /
    • v.21
    • /
    • pp.401-429
    • /
    • 1994
  • According to database and information technology development, many interests of database quality control have being increase. The purpose of database quality control is improvement quality of data itself as well as database system to satisfy user's need. As this paper was especially written about quality control of bibliographic database, to embody complete bibliographic database, it was invested numerous errors and its case by analyzing MARC records. In addition, it was presented that high degree's cataloging education, introduction of su n.0, pporting systems, and development of intelligent quality control system for quality improvement.

  • PDF

An Efficient Approach for Computer Integrated Manufacturing Database Using Neural Network (신경망을 이용한 CIM 데이터베이스의 효율적인 처리 방법)

  • 김선희;김국보;정환묵
    • Proceedings of the Korean Institute of Intelligent Systems Conference
    • /
    • 1996.10a
    • /
    • pp.223-226
    • /
    • 1996
  • One of the consideration issue in implementation and maintanence of CIM(Computer Integrated Manufacturing) database is exchange and sharing of information between heterogeneous databases. For efficient operating of SIM systems, it must be able to organize and to manage the information. In this paper, we propose method that can make enhance the efficiency of CIM database, classfying the data in database using self organize neural network to each database systems, and computing between classfied heterogeneous database using extended operator that is defined.

  • PDF

Intelligent Query Processing Using a Meta-Database KaDB

  • Huh, Soon-Young;Moon, Kae-Hyun
    • Proceedings of the Korea Database Society Conference
    • /
    • 1999.06a
    • /
    • pp.161-171
    • /
    • 1999
  • Query language has been widely used as a convenient tool to obtain information from a database. However, users demand more intelligent query processing systems that can understand the intent of an imprecise query and provide additional useful information as well as exact answers. This paper introduces a meta-database and presents a query processing mechanism that supports a variety of intelligent queries in a consistent and integrated way. The meta-database extracts data abstraction knowledge from an underlying database on the basis of a multilevel knowledge representation framework KAH. In cooperation with the underlying database, the meta-database supports four types of intelligent queries that provide approximately or conceptually equal answers as well as exact ones.

  • PDF

STEP-NC Repository for STEP-Compliant CNC (STEP-Compliant CNC를 위한 STEP-NC Repository구축)

  • 김준환;천상욱;한순흥
    • Korean Journal of Computational Design and Engineering
    • /
    • v.8 no.1
    • /
    • pp.48-54
    • /
    • 2003
  • In a design-to-manufacturing environment, the product data is shared by various CAD/CAM/CAE systems with little integration or substantial data redundancy. The main purpose of this paper is to build a database containing all the features required for STEP-NC machining and to show how a STEP-NC repository can support the complete process for machining. A STEP-NC database schema has been constructed and several query functions have been built for the purpose of implementing the retrieving system of a STEP-NC database. The EXPRESS data model of ISO 14649 has been mapped to the database data definition language of the Oracle database. To apply the STEP-NC database to an industry example, the ISO 14649 part program has been stored into the STEP-NC database. To implement example scenarios, the sample query interface has been built.

Effective UML models by using database system

  • Halim, Faisal;Muttaqin, Rizal
    • Korean Journal of Artificial Intelligence
    • /
    • v.1 no.1
    • /
    • pp.1-3
    • /
    • 2013
  • This study suggested ways to control UML diagram and to make design of database and to retrieve diagram information by giving questions. The study classified elements of the diagram. For instance, class diagram was made of classes, and class was done of class name and attribute operator. The elements were transformed to be database table having basic key and foreign key information. The ways suggested had advantages of users' sharing of model information and reuse of the model. This study investigated cost saving, time saving and UML model construction by database. We had designed integrated and relation database that could save and manage UML diagram, and suggested retrieval. For instance, we classified class diagram into elements to make tables and kept relation of each element by using not only basic key of relation database but also foreign key information. We made database of modeling depending upon methods to give users convenience.

Map Reduce-based P2P DBaaS Hub system

  • Jung, Yean-Woo;Lee, Jong-Yong;Jung, Kye-Dong
    • International journal of advanced smart convergence
    • /
    • v.5 no.1
    • /
    • pp.16-22
    • /
    • 2016
  • The database integration is being emphasized to one way of the companies collaboration. To database integration, companies are use like one database what their own, it can be provided more efficient service to customer. However, there exist some difficulty to database integration. that is the database security and database heterogeneity problems. In this paper, we proposed the MapReduce based p2p DBaaS hub system to solve database heterogeneity problem. The proposed system provides an environment for companies in the P2P cloud to integrate a database of each other. The proposed system uses DBaaS Hub for a collection of data in the P2P cloud, and use MapReduce for integrating the collected data.