• Journal of applied mathematics & informatics
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• 제27권3_4호
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• pp.909-913
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• 2009

For a family of graphs $\mathcal{H}$ and an integer k, we denote by $R^k(\mathcal{H})$ the corresponding k-Ramsey number, which is defined to be the smallest integer n such that every k-coloring of the edges of $K_n$ contains a monochromatic copy of a graph in $\mathcal{H}$. The local k-Ramsey number $R^k_{loc}(\mathcal{H})$ and the mean k-Ramsey number $R^k_{mean}(\mathcal{H})$ are defined analogously. Let $\mathcal{G}$ be the family of non-bipartite graphs and $T_n$ be the family of all trees on n vertices. In this paper we prove that $R^k_{loc}(\mathcal{G})=R^k_{mean}(\mathcal{G})$, and $R^2(T_n)$ < $R^2_{loc}(T_n)4 = $R^2_{mean}(T_n)$ for all $n\;{\ge}\;3$.

• 한국가축번식학회지
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• 제14권3호
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• pp.191-197
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• 1990

The transgenic mice were produced by microinjection of human growth hormone gene fused with mouse metallothionein Ⅰ promoter. They were mated with momal mice by backcross or brother-sister mating. The reproduction efficiencies of female and male n the FO transgenic mice were 17.6%(3/17 mice) and 31.2%(5/16 mice), respectively, and were very lower than that in normal mice(85.7% and 100%, respectively). Interestingly, a few of female transgenic mice were fertile which was different from the previous reports. Of 6 fertile transgenic mice, 2 mice were identified as mosaic type by the reduced frequency of genetic transmission to successive generation below Mendelian levle and the enhanced copy numbers of transgene in progeny mice compared with the transgenic parent. In the group of F1, F2, F3 transgenic mice the reproduction efficiencies of males were gradually improved, whereas females were absolutely infertile. It was consequently shown that the transgenic mice expressing human growth hormone gene were frequently infertile, but the genotypic and phenotypic characteristics of the fertile transgenic mice were normally passed on to the progeny through herm line. Therefore it must be considered wheter or not the products of foreign DNA introduced into animals will detrimentally affect their physiological aspects.

• 대한기계학회논문집B
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• 제31권11호
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• pp.963-970
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• 2007

The objectives of this study are to examine a bubble trap mechanism of the turbidimeter for low turbidity and to acquire it's technology concerned. Reynolds-Averaged Wavier-Stokes equation and Laglangian discrete phase model were applied to analyze a flow field in the bubble trap. 3D hybrid grid system was used to simulate the flow field of bubble trap and numbers of it's node point are about 110,000. From the comparison between the standard $k-{\varepsilon}$ model and the laminar state, it was found that the former estimated less the velocity in the outlet of bubble trap than the latter did, and that the former estimated more the shear stress at the wall of bubble trap than the latter did. And, it was possible to visualize the path of bubbles in the bubble trap and to copy the removal process of bubbles out bubble trap. Also, it was found that nearly most of bubbles in the bubble trap disappeared.

• 한국자원식물학회지
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• 제20권6호
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• pp.524-529
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• 2007

We carried out to study the function of ArgE in transgenic rice plants, which were confirmed by PCR analysis and hygromycin selection. Transgenic rice plants were with selectable marker gene(HPT) inserted in genome of the rice. Southern analysis with hpt probe confirmed by two restriction enzymes that copy numbers of the selectable gene was introduced into the plant genome. We displayed that the relationship between drought stress and ArgE gene with the overexpressing rice plants. From this result, we observed that the degree of leaves damage has no difference in control and transgenic lines. The total RNAs were extracted from 6 weeks-seedling in normal condition in order to examine their expression levels with ArgE-overexpressed transgenic rice. In particular, expression patterns of genes encoding enzymes involved in abiotic stress, including drought and salt stresses. OsGF14a and OsSalt were investigated by reverse transcription-PCR(RT-PCR). Expression levels of the OsSalt gene decreased significantly in transgenic rice plants compared to control plant. However, ion leakage measurement did not demonstrate any leaves damage change between control and ArgE transgenic plants exposure to mannitol treatment. These results suggest that expression of the ArgE is not involved in tolerance for drought stress in rice but may playa role of signaling networks for salt-induced genes.

• Journal of Microbiology and Biotechnology
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• 제22권10호
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• pp.1350-1358
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• 2012

Viral pathogens, alongside other pathogens, have major effects on crustacean aquaculture. Hepatopancreatic parvovirus (HPV) is an emerging virus in the shrimp industry and has been detected in shrimp farms worldwide. The HPV genome has greater diversity than other shrimp viruses owing to its wide host range and geographical distribution. Therefore, developing diagnostic tools is essential to detect even small copy numbers from the target region of native HPV isolates. We have developed two easy to use quantitative real-time PCR kits, called Green Star and Dual Star, which contain all of the necessary components for real-time PCR, including HPV primers, using the primers obtained from the sequences of HPV isolates from Korea, and analyzed their specificity, efficiency, and reproducibility. These two kits could detect from 1 to $1{\times}10^9$ copies of cloned HPV DNA. The minimum detection limits obtained from HPV-infected shrimp were $7.74{\times}10^1$ and $9.06{\times}10^1$ copies in the Green Star and Dual Star assay kits, respectively. These kits can be used for rapid, sensitive, and efficient screening for HPV isolates from Korea before the introduction of postlarval stages into culture ponds, thereby decreasing the incidence of early development of the disease.

• Molecules and Cells
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• 제26권4호
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• pp.387-395
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• 2008

A novel Tc1-like transposable element has been identified as a new DNA transposon in the mud loach, Misgurnus mizolepis. The M. mizolepis Tc1-like transposon (MMTS) is comprised of inverted terminal repeats and a single gene that codes Tc1-like transposase. The deduced amino acid sequence of the transposase-encoding region of MMTS transposon contains motifs including DDE motif, which was previously recognized in other Tc1-like transposons. However, putative MMTS transposase has only 34-37% identity with well-known Tc1, PPTN, and S elements at the amino acid level. In dot-hybridization analysis used to measure the copy numbers of the MMTS transposon in genomes of the mud loach, it was shown that the MMTS transposon is present at about $3.36{\times}10^4$ copies per $2{\times}10^9$ bp, and accounts for approximately 0.027% of the mud loach genome. Here, we also describe novel MMTS-like transposons from the genomes of carp-like fishes, flatfish species, and cichlid fishes, which bear conserved inverted repeats flanking an apparently intact transposase gene. Additionally, BLAST searches and phylogenetic analysis indicated that MMTS-like transposons evolved uniquely in fishes, and comprise a new subfamily of Tc1-like transposons, with only modest similarity to Drosophila melanogaster (foldback element FB4, HB2, HB1), Xenopus laevis, Xenopus tropicalis, and Anopheles gambiae (Frisky).

• Plant Resources
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• 제7권1호
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• pp.39-46
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• 2004

To demonstrate the importance of transformation efficiency in independent event, molecular and cytogenetic analysis were conducted with genomic DNA and chromosome of transgenic plants produced by Agrobacterium tumefeciens LBA4404 (pSBM-PPGN: gusA and bar). Selection ratios of putative transgenic calli were similar in independent experiments, however, transformation efficiencies were critically influenced by the type of regeneration media. MSRK5SS-Pr regeneration mediun, which contains 5 mgL$^{-1}$ kinetin, 2% (w/v) sucrose in combination with 3% (w/v) sorbitol, and 500 mgL$^{-1}$ proline, was efficient to produce transgenic plant of rice from putative transgenic callus in the presence of L-phosphinotricin (PPT). With MSRK5SS-Pr medium, transformation efficincies of Nagdongbyeo were significantly enhanced from 3.7% to 6.3% in independent callus lines arid from 7.3% to 19.7% in plants produced, respectively. Stable integration and expression of bar gene were confirmed by basta herbicide assay, PCR amplification and Southern blotting of bar gene, and fluorescence in situ hybridization (FISH) analysis using pSBM-PPGN as a probe. In Southern blot analysis, diverse band patterns were observed in total 44 transgenic plants regenerated from 20 independent PPT resistant calli showing from one to five copies of T-DNA segments, however, the transformants obtained from one callus line showed the same copy numbers with the same fractionized band patterns.

• Genomics & Informatics
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• 제16권4호
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• pp.28.1-28.6
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• 2018

Due to the increasing interest in synonymous codons, several codon bias-related terms were introduced. As one measure of them, the tRNA adaptation index (tAI) was invented about a decade ago. The tAI is a measure of translational efficiency for a gene and is calculated based on the abundance of intracellular tRNA and the binding strength between a codon and a tRNA. The index has been widely used in various fields of molecular evolution, genetics, and pharmacology. Afterwards, an improved version of the index, named specific tRNA adaptation index (stAI), was developed by adapting tRNA copy numbers in species. Although a subsequently developed webserver (stAIcalc) provided tools that calculated stAI values, it was not available to access pre-calculated values. In addition to about 100 species in stAIcalc, we calculated stAI values for whole coding sequences in 148 species. To enable easy access to this index, we constructed a novel web database, named STADIUM (Species-specific tRNA adaptive index compendium). STADIUM provides not only the stAI value of each gene but also statistics based on pathway-based classification. The database is expected to help researchers who have interests in codon optimality and the role of synonymous codons. STADIUM is freely available at http://stadium.pmrc.re.kr.

• 의료법학
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• 제23권1호
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• pp.81-119
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• 2022

대상판결은 시장지배적 지위 남용에 관한 다양한 쟁점을 다루었을 뿐만 아니라, 경쟁제한효과가 문제된 시장이 의료기기 시장이라는 측면에서도 여러 시사점을 제시하고 있다. 첫째, 관련상품 시장의 측면에서 대상판결이 주상품(CT, MRI 등 의료기기) 시장과 부상품(유지보수서비스) 시장이 밀접하게 관련되어 있다고 하더라도 이를 하나의 시장으로 보기 어렵다고 판단한 것은 수긍할 수 있다. 둘째, 대상판결은 고착효과에 관하여 명시적인 판시를 하지 않았으나, 관련시장에 대한 판단에서 높은 주상품 가격, 주상품의 사용연한이 장기인 점 등을 고려하는 등 실질적으로 고착효과를 반영한 것으로 보인다. 셋째, 객관적 행위 요건으로 '정상적인 거래관행에 반하는 타당성 없는 조건'에 대하여 대상판결은 저작권자가 실시료를 받고 저작권을 실시하는 행위는 정당한 권리행사이며, 원고가 유상의 라이선스 정책을 가지고 이를 실행하며, 예외적인 경우에만 무상으로 실시를 하였으므로 공정위가 주장하는 무상실시 관행을 증거로 인정할 수 없음을 지적하였다. 넷째, 이 사건에서 경쟁자의 비용 상승은 원고가 서비스 소프트웨어 사용에 필요한 서비스키를 유상으로 제공한 행위를 통하여 이루어졌고, 원고의 행위가 지식재산권의 행사로 정당하다면 설령 그러한 행위로 경쟁이 제한된다고 하여 이를 남용행위로 보기는 어렵다고 판단하였다. 대상판결이 다룬 관련시장의 획정, 시장지배력의 존부, 객관적 행위 요건, 경쟁제한효과 등 주요 쟁점에 대하여 대법원이 시장지배적 지위 남용행위의 증명기준과 증명도의 방향을 제시할 기준을 판시할 것으로 기대한다.

• 식물병연구
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• 제27권3호
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• pp.120-127
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• 2021

식물 바이러스는 작물 수확량에 상당한 손실을 일으키고 작물 생산을 지속적으로 위협하여 세계 식량 안보에 심각한 위협이 된다. 그 중 tomato spotted wilt virus (TSWV)는 주로 원예작물을 감염시키는 가장 위협적인 식물 바이러스로 넓은 기주 범위를 가진다. Reverse-transcription quantitative real-time PCR (RT-qPCR)은 TSWV의 민감한 검출을 위해 널리 사용되고 있지만 표준화의 어려움으로 인해 유용성이 감소한다. 따라서 본 연구에서는 TSWV 검출을 위해 민감하고 정확한 reverse transcription droplet digital polymerase chain reaction (RT-ddPCR)을 확립하였다. TSWV 검출에 대한 RT-qPCR 및 RT-ddPCR의 민감도를 비교하였고, TSWV에 대한 RT-ddPCR의 특이성 분석은 고추에서 주로 발생하는 바이러스 및 음성 대조군에서 특이성을 확인한 결과 증폭되지 않았다. RT-ddPCR 및 RTqPCR에 의해 측정된 TSWV의 선형회귀곡선은 모두 높은 선형성을 나타냈지만, RT-ddPCR 분석이 10배 이상 더 민감하고 더 낮은 TSWV의 copy 수를 검출할 수 있었다. 종합적으로, 우리의 연구 결과는 RT-ddPCR이 TSWV 검출에 대해 높은 민감도와 특이성을 제공하고 낮은 농도의 현장 시료에서 TSWV 검출하는 데 적합하다는 것을 보여준다.