• Microbiology and Biotechnology Letters
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• v.17 no.3
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• pp.207-212
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• 1989

Cultural conditions for $\alpha$-D-Glucosidase Inhibitor production from Streptomyces sp. YS-221-B isolated from soil arid identified as Streptomyces flauovirens or a subspecies of it were investigated. When the strain was cultured in a flask containing 2% glucose, 0.3% asparagine, 0.0002% riboflavin, 0.05% $K_2$HPO$_4$, 0.1% MgSO$_4$.7$H_2O$, 0.05% NaCl, pH 8.0 at 3$0^{\circ}C$, maximum production of the inhibitor was obtained after 8-9 days of cultivation. Sugar alcohols such as mannitol, i-inositol, erythritol as carbon sources, asparagine and beef extract as nitrogen sources were favorable for inhibitor production. Among vitamins, riboflavin, p-aminobenzoic acid, pyridoxamine and folic acid promoted the production of inhibitor, but depressed by the addition of hesperidine, and also depressed by cobalt, lithium and ferrous salts.

• Korean Journal of Organic Agriculture
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• v.17 no.4
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• pp.567-575
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• 2009

Organic pear (Pyrus pyriforia) fruits have remarkably increased in Korea since year 2000 due to increase consumer's demand for the fruit, and the farmers are keep trying to change their cultivation system that is replaced from conventional farming to organic-base farming for the fruit. However, there is little information for the soil properties, tree nutrition, and tree growth at organic orchards in Korea. Therefore, this study was established to investigate for the chemical properties of soils and leaf and bud characteristics of a conventional and organic pear trees in experimental orchards for two years. Commercial (Sanwool, YoungHwa Co., Korea) compost was applied to the orchard soils with conventional farming systems for two years for pear trees (10 to 15 year old trees) in KyungSan, Korea. The compost application increased pH, organic matter content, cation exchange capacity (CEC), and, microbial biomass in the soil. The compost treatment also increased specific leaf weight and foliar $P_2O_5$ concentration as well as leaf and floral bud sizes.

• Plant Biotechnology Reports
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• v.3 no.4
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• pp.277-283
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• 2009

One of the limitations to conducting maize Agrobacterium-mediated transformation using explants of immature zygotic embryos routinely is the availability of the explants. To produce immature embryos routinely and continuously requires a well-equipped greenhouse and laborious artificial pollination. To overcome this limitation, an Agrobacterium-mediated transformation system using explants of type II embryogenic calli was developed. Once the type II embryogenic calli are produced, they can be subcultured and/or proliferated conveniently. The objectives of this study were to demonstrate a stable Agrobacterium-mediated transformation of maize using explants of type II embryonic calli and to evaluate the efficiency of the protocol in order to develop herbicide-resistant maize. The type II embryogenic calli were inoculated with Agrobacterium tumefaciens strain C58C1 carrying binary vector pTF102, and then were subsequently cultured on the following media: co-cultivation medium for 1 day, delay medium for 7 days, selection medium for $4{\times}14$ days, regeneration medium, and finally on germination medium. The T-DNA of the vector carried two cassettes (Ubi promoter-EPSPs ORF-nos and 35S promoter-bar ORF-nos). The EPSPs conferred resistance to glyphosate and bar conferred resistance to phosphinothricin. The confirmation of stable transformation and the efficiency of transformation was based on the resistance to phosphinothricin indicated by the growth of putative transgenic calli on selection medium amended with $4mg\;1^{-1}$ phosphinothricin, northern blot analysis of bar gene, and leaf painting assay for detection of bar gene-based herbicide resistance. Northern blot analysis and leaf painting assay confirmed the expression of bar transgenes in the $R_1$ generation. The average transformation efficiency was 0.60%. Based on northern blot analysis and leaf painting assay, line 31 was selected as an elite line of maize resistant to herbicide.

• Korean Journal of Organic Agriculture
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• v.27 no.4
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• pp.463-477
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• 2019

This study was conducted to compare the community structure and biodiversity of epigeic spiders between pear fields cultivated by integrated pest management (IPM) and organic methods. This is the first study of this kind to be conducted in Korea. Eighty-four spider species from 22 families were identified among the collected 2,489 arthropods, with 754 individuals being sampled from IPM fields and 1,735 individuals from organic fields. Generally, Theridiidae, Linyphiidae, Lycosidae, Agelenidae, Gnaphosidae, and Salticidae were the dominant spider families in the pear orchard regardless of the farming methods, and species richness and abundance were higher in organic fields than in IPM fields. The dominant species were the wolf spiders (Lycosidae) and stone spiders (Gnaphosidae), and their cumulative abundance was 70.7% in IPM fields and 72.7% in organic fields. The community structure between organic and IPM fields was heterogeneous, with a 45% similarity level. Biodiversity, species richness, abundance, and species diversity index were higher in organic fields than in IPM fields, and significantly different between the farming methods. Seasonal fluctuations in biodiversity were similar in both IPM and organic fields. The species richness and species diversity index increased and the abundance decreased in the second half of the cultivation period. This study on the community structure and biodiversity of epigeic spiders, which form one of the most important predator groups, will provide principal ecological and faunistic information required to maintain the biodiversity of useful arthropods in agricultural ecosystems and help implement sustainable agriculture based on the active use of natural enemies.

• The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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• v.8 no.1
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• pp.29-34
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• 2003

Recent reports on the phagotrophic feeding of M. rubrum are based on cultivation experiments with novel isolates of this ciliate species from Gomso Bay, Korea. Photo-adapted cryptophyte(CR-MAL01) cultures at high light of 100 $\mu$mol photons m$^{-2}$ s$^{-1}$ (HL) and low light of 10 $\mu$mol photons m$^{-2}$ s$^{-1}$ (LL) were fed to M. rubrum (MR-MAL01) cultures under HL and LL conditions, respectively. Absorbance spectrum by LL M. rubrum showed the same peak at wavelengths around 542nm as that by LL cryptophyte prey, which was not showed in HL M. rubrum. This result supports the implication that light utilization and absorption pattern of M. rubrum population must depend on the status of photo-adaptation of the co-existing population of prey cryptophyte. Consequences of the present research results were discussed in relation to the function of the prey cryptophyte and phagotrophic M. rubrum in marine microbial ecosystem.

• Journal of Soil and Groundwater Environment
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• v.20 no.1
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• pp.56-64
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• 2015

Acid mine drainage occurrence is a serious environmental problem by mining industry, it usually contains high levels of metal ions, such as iron, copper, zinc, aluminum, and manganese, as well as metalloids of which arsenic is generally of the greatest concern. An indigenous plant extract was used to produce calcium carbonate from Canavalia ensiformis as effective biomaterial, and its ability to form the calcium carbonate under stable conditions was compared to that of purified urease. X-ray diffraction and scanning electron microscopy were employed to elucidate the mechanism of calcium carbonate formation from the crude plant extracts. The results revealed that urease in the plant extracts catalyzed the hydrolysis of urea in liquid state cultures and decreased heavy metal amounts in the contaminated soil. The heavy metal amounts were decreased in the leachate from the treated mine soil; 31.7% of As, 65.8% of Mn, 50.6% of Zn, 51.6% of Pb, 45.1% of Cr, and 49.7% of Cu, respectively. The procedure described herein is a simple and beneficial method of calcium carbonate biomineralization without cultivation of microorganisms or further purification of crude extracts. This study suggests that crude plant extracts of Canavalia ensiformis have the potential to be used in place of purified forms of the enzyme during remediation of heavy metal contaminated soil.

• The Korean Journal of Mycology
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• v.20 no.4
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• pp.354-359
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• 1992

The effect of the addition of various vegetable oils on the mycelial growth was studied. Most vegetable oils were proved to be stimulative for the mycelial growth, and the best mycelial growth (12 mg/ml) was obtained with the addition of cotton seed oil. Several agricultural wastes i.e., rice straw, peanut hull, sawdust, rice hull, cocoa hull, coffee waste and beer waste were empolyed as substrates for sporophore production of p. sajor-caju. The biological efficiency(BE) for sporophore productions of rice straw and peanut hull were 36.4% and 32.6%, respectively. The highest yield of sporophore was obtained from the mixture of rice straw (50%) and beer waste (50%)(BE 109.6%) followed by peanut hull (50%) and beer waste (50%)(BE; 74.5%).

• Korean Journal of Environmental Agriculture
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• v.26 no.4
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• pp.325-331
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• 2007

A series of experiments were performed to evaluate effects of lettuce seed treatment with low temperature and dry heat treatment (DHT) on bolting response in the case of spring cultivation. During spring production in greenhouse, bolting response of the plants produced from the treated seeds was faster in the order of low temperature treatment, control and DHT. Plant height was increased 5-10 cm higher by low temperature treatment, but plant growth of some cultivars was inhibited by DHT. Difference on lettuce plant growth between low temperature treatment and DHT was gradually diminished with the lapse of time after transplanting. Fresh weight of plant was not significantly different among all treatments. 'Red Gyeolku' showed very early bolting response and plant height was significantly promoted by low temperature treatment. However, 'Cheongchima' showed low bolting percentage after various seed treatments, so it is considered late-bolting cultivar.

• KOREAN JOURNAL OF CROP SCIENCE
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• v.48 no.1
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• pp.1-7
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• 2003

In spite water direct seeding cultivation of rice has advantages in terms of laborsaving and cost-down, it demonstrates uneven seedling establishment and difficult weed management. To select an applicable mat for mulching system of water seeded rice, weed occurrence, growth and yield performances of rice, and soil temperature were evaluated in several kinds of biodegradable mulching material. Field studies were conducted at the experimental farm of National Crop Experiment Station in 1999 and 2000. Among the mats tested in 1999, Safer-mat had the greatest effect on inhibiting weed occurrence and Lawn-mat demonstrated the least efficacy of weed control (EWC) value. In Safer-mat treatment, Ludwigia prostrata was the dominant weed species but Echinochloa crus-galli was not observed. Different kinds of mulching material from the mats studied in 1999 were tested in 2000. Biodegradable polyester (PES) coated on the recycled paper for newspaper press (RP) treatments showed similar or higher EWC values than non-mulched broadcast seed rice with 2 times of herbicide application (BC-herbicide) and Safer-mat that was the most effective mat on preventing weed appearance in 1999. Immediately after mat mulching on the surface of paddy soil, five pregerminated rice seeds were manually sown in each 3cm-hole formerly punctured at 30${\times}$14 cm spacing in 2000. All the 3 kinds of mulching material tested in 2000 had better seedling stand than BC-herbicide treatment. Rice yield in PES coated with 10 thickness on RP (PES10 $\mu\textrm{m}$＋RP) was a little higher than in BC-herbicide treatment but the former produced less panicles in unit land area than the latter. PES10 $\mu\textrm{m}$＋RP demonstrated a great effect on raising soil surface temperature than non-mulching treatment throughout the period of seedling establishment.

• Genomics & Informatics
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• v.17 no.3
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• pp.28.1-28.9
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• 2019

Bar-code (tag) microarrays of yeast gene-deletion collections facilitate the systematic identification of genes required for growth in any condition of interest. Anti-sense strands of amplified bar-codes hybridize with ~10,000 (5,000 each for up-and down-tags) different kinds of sense-strand probes on an array. In this study, we optimized the hybridization processes of an array for fission yeast. Compared to the first version of the array (11 ㎛, 100K) consisting of three sectors with probe pairs (perfect match and mismatch), the second version (11 ㎛, 48K) could represent ~10,000 up-/ down-tags in quadruplicate along with 1,508 negative controls in quadruplicate and a single set of 1,000 unique negative controls at random dispersed positions without mismatch pairs. For PCR, the optimal annealing temperature (maximizing yield and minimizing extra bands) was 58℃ for both tags. Intriguingly, up-tags required 3× higher amounts of blocking oligonucleotides than down-tags. A 1:1 mix ratio between up- and down-tags was satisfactory. A lower temperature (25℃) was optimal for cultivation instead of a normal temperature (30℃) because of extra temperature-sensitive mutants in a subset of the deletion library. Activation of frozen pooled cells for >1 day showed better resolution of intensity than no activation. A tag intensity analysis showed that tag(s) of 4,316 of the 4,526 strains tested were represented at least once; 3,706 strains were represented by both tags, 4,072 strains by up-tags only, and 3,950 strains by down-tags only. The results indicate that this microarray will be a powerful analytical platform for elucidating currently unknown gene functions.