• Title/Summary/Keyword: clonal test

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Prevalence of Extended Spectrum $\beta-Lactamase-Producing$ Clinical Isolates of Escher­ichia coli in a University Hospital, Korea (국내 대학병원에서 분리된 Eschepichia coli의 Extended-spectrum $\beta-Lactamase$ (ESBL) 현황)

  • Lee Kyenam;Kim Woo-Joo;Lee Yeonhee
    • Korean Journal of Microbiology
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    • v.40 no.4
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    • pp.295-301
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    • 2004
  • Recently, the rapid increase and global spread of extended-spectrum $\beta-lactamase$ producing clinical isolates has become a serious problem. The incidence of extended-spectrum $\beta-lactamase$ producing clinical isolates of Escherichia coli in Korea and susceptibility to antimicrobial agents were investigated. Total 233 isolates of E. coli were obtained from urine from hospitalized patients in Guro hospital, Korea University in 2001. One hun­dred and eighty four isolates $(78.9\%)$ were resistant to ampicillin, 80 isolates $(34.3\%)$ were resistant to ceph­alothin, 93 isolates $(39.9\%)$ were resistant to gentamicin, and 64 isolates $(27.5\%)$ were resistant to norfloxacin. Among 233 isolates, 17 isolates $(7.3\%)$ were positive as determined by the double disk synergy test. When min­imal inhibitory concentrations were assayed with additional 6 antimicrobial agents, 13 isolates $(76.5\%)$ were multi-drug resistant to at least four different class antimicrobial agents. Extended-spectrum $\beta-lactamase$ were characterized with isoelectric focusing gel electrophoresis and DNA sequencing. They were TEM-1 in 5 iso­lates, TEM-15 in 1 isolate, TEM-20 in 1 isolate, TEM-52 in 4 isolates, TEM-1 and AmpC in 2 isolates, TEM-1 and OXA-30 in 1 isolate, TEM-1 and OXA-33 in 1 isolate, TEM-1, CTX-M-3, and AmpC in 1 isolate, but SHV was not detected. Antimicrobial resistance genes were transferred to animal isolate of E. coli (CCARM No. 1203) by the filter mating method. Extended spectrum $\beta-lactamase$ producers studied in the current study have low correlation to each other as determined by random amplified polymorphic DNA and pulsed field gel elec­trophoresis. This is a contradictory result from the general hypothesis that extended-spectrum $\beta-lactamase$ pro­ducers in one hospital is a result from a clonal spread.

Rooting of Needle Fascicles of Pinus radiata in Test Tubes (Pinus radiata 엽속삽목(葉束揷木)의 시험관내(試驗管內) 발근(發根))

  • Hong, Sung Ok;Sweet, Geoffrey B.
    • Journal of Korean Society of Forest Science
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    • v.32 no.1
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    • pp.64-72
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    • 1976
  • A series of rooting experiments of P. radiata needle fascicles were carried out in test tubes using peat-pumice medium to see a possibility of rooting fascicles in test tubes and, if possible, to find out whether that method can improve the rooting. Typical rooting of clones from ortets aged 3, 7, 11. 18, and over 40, respectively, was 57%, 47%, 18%, 4%, and 2%. The effect of ortet ages upon rooting of fascicle cuttings was significantly exerted in these experiments. In the older ortets these results are not as good as those often obtained in a glasshouse. Hormones tested (indolebutyric acid and abscisic acid) had no significant effect on rooting and neither did a series of fungicides tested. Needle fascicles placed in an 18 hour day at $20^{\circ}/10^{\circ}C$ (day/night temperature) rooted signficantly better than those in a 10 hour day at the same temperature regime. The latter in turn rooted better than those set under a 10 hour day at $15^{\circ}/5^{\circ}C$. Clonal differences in rooting ability were also distinct in every trial of the present experiments with needle fascicles.

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$pep^{27}$ and lytA in Vancomycin-Tolerant Pneumococci

  • Olivares, Alma;Trejo, Jose Olivares;Arellano-Galindo, Jose;Zuniga, Gerardo;Escalona, Gerardo;Vigueras, Juan Carlos;Marin, Paula;Xicohtencatl, Juan;Valencia, Pedro;Velazquez-Guadarrama, Norma
    • Journal of Microbiology and Biotechnology
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    • v.21 no.12
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    • pp.1345-1351
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    • 2011
  • Vancomycin therapy failure due to the emergence of tolerance in pneumococci is increasing. The molecular mechanism of tolerance is not clear, but lytA and $pep^{27}$ are known to be involved. Our aim was to evaluate the expression of both genes in vancomycin-tolerant Streptococcus pneumoniae (VTSP) strains. Eleven VTSP strains from a total of 309 clinical isolates of S. pneumoniae from 1997 to 2006 were classified according to the criteria of Liu and Tomasz. All VTSP strains were evaluated for susceptibility according to CLSI criteria, serotype by the Quellung test, and clonality by PFGE. The expressions of lytA and $pep^{27}$ were analyzed in different growth phases by RT-PCR with and without vancomycin. Eighty-two percent of VTSP strains showed resistance to penicillin, and 100% were sensitive to vancomycin and cefotaxime. The most frequent serotypes of VTSP strains were 23F (4/11) and 6B (3/11). Clonal relationship was observed in only two strains. No significant changes were observed in $pep^{27}$ expression in the three phases of growth in VTSP strains with and without vancomycin. Interestingly, $pep^{27}$ expression in the stationary phase in the non-tolerant reference strain R6 was significantly higher. However, no significant differences in lytA expression were observed between VTSP and R6 strains during the phases of growth analyzed. The absence of changes in $pep^{27}$ expression in VTSP strains in the stationary phase may be related to their ability to tolerate high antibiotic concentrations, and thus, they survive and remain in the host under the antibiotic selective pressure reflected in therapeutic failure.

Investigation of Growth Characteristics of Salix gracilistyla Clones for Promoting Woody Biomass Resources (목질계 바이오매스 생산을 위한 갯버들의 생장특성)

  • Lee, Hyunseok;An, Chanhoon;Kang, Junwon;Lee, Wiyoung;Yi, Jae-Seon
    • Journal of Korean Society of Forest Science
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    • v.107 no.1
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    • pp.16-24
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    • 2018
  • This study was investigated to select superior population and clones of Salix gracilistyla for promoting woody biomass resources through creating of short rotation coppices (SRC). Plant materials were collected from seven different population groups of S. gracilistyla and planted at two different nursery sites in Chuncheon and Yongin. Height and root collar diameter showed statistically significant differeces among population, nursery, and annual growth for three years (p<0.01). Aboveground biomass was harvested to investigate dry weight after 3 years from planting, the Youngwol population showed the highest yield as $4.8kg\;DW\;plant^{-1}$ in Chuncheon nursery which was more than double yield compared to the other nursery planted plants. However, Hongcheon and Wonju populations as $3.3kg\;plant^{-1}$, showed the best yield in Yongin nursery. In addition, there was a significant difference between collected populations and nurseries. But there was statistically significant different interaction between population (Pop) and nursery (Nur) (F value = 3.51, p<0.01). Therefore, the superior populations selected by this experiment could be cultivated as an excellent variety for woody biomass resources through the clonal test.

Development of New fall Cultivars with Yellow Fall Leaf Color in Zelkova serrata Makino (황색(黃色) 단풍(丹楓) 느티나무(Zelkova serrata Makino) 신품종(新品種) 육성(育成))

  • Shim, Kyung-Ku;Park, Hyung-Soon;Byun, Kwang-Ok;Ha, Yoo-Mi
    • Horticultural Science & Technology
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    • v.17 no.2
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    • pp.148-152
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    • 1999
  • This study was carried out to develop new cultivars of Z. serrata showing yellow fall leaf. Z. serrata which had yellow fall leaves were selected and then examined for contents of leaf anthocyanin and chlorophyll. In addition, for the progeny test, selected trees were grafted. Of 21 trees having yellow autumn leaves, three individuals, 'S-4', 'S-14', and 'J-32' were finally selected. They contained high level of anthocyanin with higher level in the leaves. Once developed, the yellow color remained till late autumn. Grafted plants of the selected strains showed high grafting efficiency and vigorous growth. Yellow foliage color were found to be maintained in the grafted trees. The tree 'S-4' was 7 m tall and 6 m in crown width, whereas 'S-14' and 'J-32' were 6 m tall and 4m in crown width. The soil pH of the survey sites ranged from 5.9 to 7.24. However, other soil characteristics did not show much difference among the sites with regard to inorganic nutrients including $N,\;P_2O_5,\,CEC,\,K^+,\,Ca^{2+}$, and $Mg.^{2+}$ 'S-4', 'S-14', and 'J-32' clonal lines developing yellow fall leaf were selected as new cultivars and propagated by grafting.

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A Technique for Selecting Superior Populus alba×Populus glandulosa F1 Clones with Some Physiological Characters (몇 생리적(生理的) 특성(特性)을 이용(利用)한 제일대(第一代) 잡종(雜種) 포플러, Populus alba×Populus glandulosa F1의 우량(優良) clone 선발(選拔)에 관(關)한 연구(硏究))

  • Kim, Gab Tae;Lee, Don Koo
    • Journal of Korean Society of Forest Science
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    • v.59 no.1
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    • pp.15-30
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    • 1983
  • To select the superior clones of Populus alba ${\times}$ Populus glandulosa $F_1$, growth and some growth-related physiological characters were examined for thirteen, one-year-old and fifteen, two-year-old clones, respectively at the Seoul National University nursery in Suweon, Clonal differences in growth (total dry weight per tree), leaf area per tree and leaf chlorophyll content per tree at tow-year-old plots were highly significant at the 1% level, but not at one-year-old plots, Highly significant correlation was found between leaf area per tree and total dry weigh per tree (r=0.865), between leaf chlorophyll content per tree and total dry weight per tree (r=0.888), and between photosynthetic ability per tree and total dry weight per tree (r=0.745). The photosynthetic ability and leaf chlorophyll content per unit leaf area of one-year-old plant increased with increasing leaf order number from top. reached maximum value in the twenty-eithth and thirty-third leaves, respectively, and then decreased gradually from those leaved to base, Clones 68-1-54, 66-26-55 and 65-22-11 showed test growth based on leaf area per tree, leaf chlorophyll content per unit leaf area and photosynthetic ability of leaf tissue per unit area. Growth yield of populus alba ${\times}$ P. glandulosa $F_1$ clones could be estimated from either leaf area per tree of leaf chlorophyll content per tree. Therefore, measurements of leaf area and leaf chlorophyll content appear useful to select superior populus clones early growth.

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Improving Corsican pine somatic embryo maturation: comparison of somatic and zygotic embryo morphology and germination

  • Wtpsk, Senarath;Shaw, D.S.;Lee, Kui-Jae;Lee, Wang-Hyu
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2003.04a
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    • pp.61-62
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    • 2003
  • Clonal propagation of high-value forest trees through somatic embryogenesis (SE) has the potential to rapidly capture the benefits of breeding or genetic engineering programs and to improve raw material uniformity and quality. A major barrier to the commercialization of this technology is the low quality of the resulting embryos. Several factors limit commercialization of SE for Corsican pine, including low initiation rates, low culture survival, culture decline causing low or no embryo production, and inability of somatic embryos to fully mature, resulting in low germination and reduced vigour of somatic seedlings. The objective was to develop a Corsican pine maturation medium that would produce cotyledonary embryos capable of germination. Treatments were arranged in a completely randomized design. Data were analyzed by analysis of variance, and significant differences between treatments determined by multiple range test at P=0.05. Corsican pine (Pinus nigra var. maritima) cultures were initiated on modified !P6 medium. Modifications of the same media were used for culture multiplication and maintenance. Embryogenic cultures were maintained on the same medium semi solidified with 2.5 g/l Gelrite. A maturation medium, capable of promoting the development of Corsican pine somatic embryos that can germinate, is a combination of iP6 modified salts, 2% maltose, 13% polyethylene glycol (PEG), 5 mg!l abscisic acid (ABA), and 2.5 g/l Gelrite. After initiation and once enough tissue developed they were grown in liquid medium. Embryogenic cell suspensions were established by adding 0.951.05 g of 10- to 14-day-old semisolid-grown embryogenic tissue to 9 ml of liquid maintenance media in a 250ml Erlenmeyer flask. Cultures were then incubated in the dark at 2022$^{\circ}$C and rotated at 120 rpm. After 2.53 months on maturation medium, somatic embryos were selected that exhibited normal embryo shape. Ten embryos were placed horizontally on 20 ml of either germination medium ($\frac{2}{1}$strength Murashige and Skoog (1962) salts with 2.5 g/l activated charcoal) or same medium with copper sulphate adjusted to 0.25 mg/1 to compensate for copper adsorption by activated carbon. 2% and 4% maltose was substituted by 7.5% and 13% PEG respectively to improve the yield of the embryos. Substitution of' maltose with PEG was clearly beneficial to embryo development. When 2% of the maltose was replaced with 7.5% PEG, many embryos developed to large bullet-shaped embryos. At latter stages of development most embryos callused and stopped development. A few short, barrel-shaped cotyledonary embryos formed that were covered by callus on the sides and base. When 4% of the maltose was removed and substituted with 13% PEG, the embryos developed further, emerging from the callus and increasing yield slightly. Microscopic examination of the cultures showed differing morphologies, varying from mostly single cells or clumps to well-formed somatic embryos that resembled early zygotic embryos only liquid cultures with organized early-stag. A procedure for converting and acclimating germinants to growth in soil and greenhouse conditions is also tested. Seedling conversion and growth were highly related to the quality of the germinant at the time of planting. Germinants with larger shoots, longer, straighter hypocotyls and longer roots performed best. When mature zygotic embryos germinate the root emerges, before or coincident with the shoot. In contrast, somatic embryos germinate in reverse sequence, with the cotyledons greening first, then shoot emergence and then, much later, if at all, the appearance of the root. Somatic seedlings, produced from the maturation medium, showed 100% survival when planted in a field setting. Somatic seedlings showed normal yearly growth relative to standard seedlings from natural seed.

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