• Title/Summary/Keyword: center in Seoul

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Genome-wide in-locus epitope tagging of Arabidopsis proteins using prime editors

  • Cheljong Hong;Jun Hee Han;Gue-Ho Hwang;Sangsu Bae;Pil Joon Seo
    • BMB Reports
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    • v.57 no.1
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    • pp.66-70
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    • 2024
  • Prime editors (PEs), which are CRISPR-Cas9 nickase (H840A)-reverse transcriptase fusion proteins programmed with prime editing guide RNAs (pegRNAs), can not only edit bases but also install transversions, insertions, or deletions without both donor DNA and double-strand breaks at the target DNA. As the demand for in-locus tagging is increasing, to reflect gene expression dynamics influenced by endogenous genomic contexts, we demonstrated that PEs can be used to introduce the hemagglutinin (HA) epitope tag to a target gene locus, enabling molecular and biochemical studies using in-locus tagged plants. To promote genome-wide in-locus tagging, we also implemented a publicly available database that designs pegRNAs for in-locus tagging of all the Arabidopsis genes.

Patterns of Unintentional Domestic Injuries in Korea (우리나라 주택 내에서 발생하는 비의도적 손상의 양상)

  • Lee, Eun-Jung;Lee, Jin-Seok;Kim, Yoon;Park, Kun-Hee;Eun, Sang-Jun;Suh, Soo-Kyung;Kim, Yong-Ik
    • Journal of Preventive Medicine and Public Health
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    • v.43 no.1
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    • pp.84-92
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    • 2010
  • Objectives: To investigate the patterns of unintentional home injuries in Korea. Methods: The study population was 12,382,088 people who utilized National Health Insurance services due to injuries (main diagnosis codes S00 to T28) during 2006. Stratified samples(n=459,501) were randomly selected by sex, age group and severity of injury. A questionnaire was developed based on the International Classification of External Causes of Injury and 18,000 cases surveyed by telephone were analyzed after being projected into population proportionately according to the response rates of their strata. Domestic injury cases were finally included. Results: Domestic injuries (n=3,804) comprised 21.1% of total daily life injuries during 2006. Women were vulnerable to home injuries, with the elderly and those of lower income (medical-aid users) tending to suffer more severe injuries. Injury occurred most often due to a slipping fall (33.9%), overexertion (15.3%), falling (9.5%) and stumbling (9.4%), with severe injury most often resulting from slipping falls, falls and stumbles. Increasing age correlated with domestic injury-related disability. Conclusions: The present findings provide basic information for development of home injury prevention strategies, with focus on the elderly.

Development of a new ball-type phantom for evaluation of the image layer of panoramic radiography

  • Yeom, Han-Gyeol;Kim, Jo-Eun;Huh, Kyung-Hoe;Yi, Won-Jin;Heo, Min-Suk;Lee, Sam-Sun;Choi, Soon-Chul
    • Imaging Science in Dentistry
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    • v.48 no.4
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    • pp.255-259
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    • 2018
  • Purpose: This study proposes a new ball-type phantom for evaluation of the image layer of panoramic radiography. Materials and Methods: The arch shape of an acrylic resin phantom was derived from average data on the lower dental arch in Korean adult males. Metal balls with a 2-mm diameter were placed along the center line of the phantom at a 4-mm mesiodistal interval. Additional metal balls were placed along the 22 arch-shaped lines that ran parallel to the center line at 2-mm buccolingual intervals. The height of each ball in the horizontal plane was spaced by 2.5 mm, and consequently, the balls appeared oblique when viewed from the side. The resulting phantom was named the Panorama phantom. The distortion rate of the balls in the acquired image was measured by automatically calculating the difference between the vertical and horizontal length using $MATLAB^{(R)}$. Image layer boundaries were obtained by applying various distortion rate thresholds. Results: Most areas containing metal balls (91.5%) were included in the image layer with a 50% distortion rate threshold. When a 5% distortion rate threshold was applied, the image layer was formed with a small buccolingual width along the arch-shaped center line. However, it was medially located in the temporomandibular joint region. Conclusion: The Panorama phantom could be used to evaluate the image layer of panoramic radiography, including all mesiodistal areas with large buccolingual width.

A Case of Bilateral Gynecomastia Associated with Isoniazid (Isoniazid를 포함한 항결핵약제 투여 후 발생한 여성형 유방 증례 1예)

  • Heo, Eun Young;Jeong, Ina;Lee, Jae Seok;Lee, Chang Hoon;Chung, Hee Soon;Kim, Deog Kyeom
    • Tuberculosis and Respiratory Diseases
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    • v.65 no.4
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    • pp.308-312
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    • 2008
  • Gynecomastia is a benign enlargement of the male breast attributable to proliferation of the ductal elements. Gynecomastia has been rarely reported as an adverse effect of isoniazid therapy. We report the case of a 35-year-old man who was prescribed with isoniazid, rifampicin, ethambutol and pyrazinamide to treat pulmonary and lymphatic tuberculosis. After five months of treatment, the patient complained of painful engorgement in the bilateral breasts and the presence of male gynecomastia was confirmed with a physical examination and radiographical methods. The serum level of estradiol was also increased. Common causes of male gynecomastia were excluded through history taking and the laboratory findings. The anti-TB drugs were changed to a second line regimen due to radiographical progression and the intolerance of the patient to gynecomastia. Gynecomastia was relieved very slowly and a tender subareolar palpable mass decreased in size and consistency over five-month period after stopping the probable causative drug, isoniazid. From a review of the literature, gynecomastia has been shown to be a side effect of treatment with first line anti-tuberculosis drugs, and especially with isoniazid. We report the rare case.

Effects of Network Density on Gridded Horizontal Distribution of Meteorological Variables in the Seoul Metropolitan Area (관측망 밀도가 기상 자료의 격자형 수평 분포에 미치는 영향)

  • Kang, Minsoo;Park, Moon-Soo;Chae, Jung-Hoon;Min, Jae-Sik;Chung, Boo Yeon;Han, Seong Eui
    • Atmosphere
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    • v.29 no.2
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    • pp.183-196
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    • 2019
  • High-quality and high-resolution meteorological information is essential to reduce damages due to disastrous weather phenomena such as flash flood, strong wind, and heat/cold waves. There are many meteorological observation stations operated by Korea Meteorological Administration (KMA) in Seoul Metropolitan Area (SMA). Nonetheless, they are still not enough to represent small-scale weather phenomena like convective storm cells due to its poor resolution, especially over urban areas with high-rise buildings and complex land use. In this study, feasibilities to use additional pre-existing networks (e.g., operated by local government and private company) are tested by investigating the effects of network density on the gridded horizontal distribution of two meteorological variables (temperature and precipitation). Two heat wave event days and two precipitation events are chosen, respectively. And the automatic weather station (AWS) networks operated by KMA, local-government, and SKTechX in Incheon area are used. It is found that as network density increases, correlation coefficients between the interpolated values with a horizontal resolution of 350 m and observed data also become large. The range of correlation coefficients with respect to the network density shows large in nighttime rather than in daytime for temperature. While, the range does not depend on the time of day, but on the precipitation type and horizontal distribution of convection cells. This study suggests that temperature and precipitation sensors should be added at points with large horizontal inhomogeneity of land use or topography to represent the horizontal features with a resolution higher than 350 m.

Urinary Tract Infections in Catheterized Patients Receiving Home Care Nursing (도뇨관 관리를 위해 가정간호에 의뢰된 환자의 요로감염실태)

  • Park, Min-A;Lee, Jong-Eun;Cho, Young Yi;Jang, Jung Sook;Choi, Ji Yeon
    • Journal of Home Health Care Nursing
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    • v.28 no.2
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    • pp.178-185
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    • 2021
  • Purpose: In this study, we aimed to explore the risk factors for catheter-associated urinary tract infections (CAUTI) in patients receiving home care nursing. Methods: A total of 117 participants registered for home care nursing provided by the University of C hospital in Seoul were included in the study. Data were based on a survey and urine examination results from June to July 2018. Results: Asymptomatic bacteriuria was identified in 96 (82%) patients. Age, sex, activity, diabetes mellitus, mental status, presence of other diseases, catheter material type, catheter size and fixation, hand washing (care giver), gloving (care giver), perineal care, and bladder irrigation were not recognized as risk factors for CAUTI. Age and catheterization duration were associated with CAUTI. Conclusions: Old age was found to be a risk factor for CAUTI (p=0.048). CAUTI incidence decreased as catheter use exceeded 70 months (p=0.028).

A Pilot Study on Automatic Diagnosis of Cancer Cells Metastasis in Frozen Section Using Convolutional Neural Network (합성곱 신경망을 이용한 동결절편의 암세포 전이 여부 자동진단에 관한 예비연구)

  • Jung, Dae-Il;Kang, Jae-Ku;Jeon, Hye-Lynn;Oh, Se-Jong;Kim, Sungchul;Kim, Young-Gon;Gong, Gyungyub;Song, In Hye;Park, So Yeon;Ahn, Soomin;Lee, Hyunna;Yang, Dong Hyun;You, Wonsang
    • Annual Conference of KIPS
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    • 2020.05a
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    • pp.480-482
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    • 2020
  • 동결절편검사는 수술과 연계하여 암 전이 여부를 판단하기 위한 응급한 병리검사가 필요할 때 이용된다. 합성곱 신경망은 이미지 분류에 뛰어난 성능을 보이는 딥러닝 기법으로 본 논문에서는 이를 이용하여 유방암 전이 여부를 자동적으로 진단하는 방법을 제안한다. 실험과정은 전처리, 학습, 후처리의 과정으로 구성되어 있으며, 합성곱 신경망으로는 Resnet-18 모델을 사용하였다. 실험결과 예측 정확도 및 종양의 최대 길이 정합 여부를 점수로 환산하여 약 0.514 의 결과를 보였다.

Localization of Quantitative Trait Loci for Bone Mineral Density on Chromosome 13 in the Mongolian Population

  • Seo, Soo-Hyun;Lim, Hae-Jeng;Ahn, Se-Jin;Lee, Joseph;Kim, Jong-Il
    • Genomics & Informatics
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    • v.7 no.3
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    • pp.152-158
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    • 2009
  • Although the genetic basis for bone mineral density (BMD) has been studied by many groups so far, genes responsible for this complex trait has not been completely revealed. In order to localize quantitative trait loci (QTLs) for BMD variation in Asian population, the study was designed using a group of Mongolian population, a genetically closed population with a homogeneous lifestyle. BMD was measured at the left and right wrists and ankles using DEXA in 1,082 participants from 142 families. Genotyping of 13 polymorphic microsatellite markers on chromosome 13 (average spacing 8-9 cM) and two-point and multipoint linkage analysis were performed. In two-point linkage analysis, we identified two markers, D13S175 (6.03 cM) and D13S265 (68.73 cM) that had LOD scores greater than 1 for left ankle (LOD=2.09, LOD=1.49, respectively). We also found a marker D13S175 (6.03 cM) with a high LOD for left wrist (LOD=1.49) and the markers D13S265 (68.73 cM) and D13S217 (17.21 cM) for the right wrist (LOD= 1.82, LOD= 1.62, respectively). Among these significant marker regions, only two regions at 17 cM (13p11) and 65 cM (13q21) for the right wrist overlapped with major QTLs reported in following multipoint linkage analysis (LOD= 1.7549, LOD=1.4462, respectively). This study provides the possible evidence of the presence of QTLs affecting right wrist BMD in Mongolian populations on 13p11 and 13q21. Modest evidence was also found for genes affecting left ankle and left wrist BMD on 13p13.

Influence of Cooking, Storage Period, and Re-heating on Production of Cholesterol Oxides in Chicken Meat

  • Choe, Juhui;Min, Joong-Seok;Lee, Sang-Ok;Khan, Muhammad Issa;Yim, Dong Gyun;Lee, Mooha;Jo, Cheorun
    • Food Science of Animal Resources
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    • v.38 no.3
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    • pp.433-441
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    • 2018
  • The objective of present study was to investigate the effect of cooking and their combinations with re-heating methods on the formation of cholesterol oxidation products (COPs) in stored chicken thigh meat. Pan roasting, steaming, oven grilling, charcoal grilling, and microwaving were used for cooking. Re-heating of samples was done using the same cooking methods or microwaving after 3 and 6 d of refrigerated storage. Cooking and re-heating resulted in reduction of crude fat and cholesterol contents of chicken thigh meat depending on storage period before re-heating. Cooking and storage period had no influence on the total amount of COPs. The highest total amount of COPs was observed in meat samples cooked by steaming and reheated by microwaving after 6 d of storage, which showed similar value to raw chicken meat stored for 6 days. However, different re-heating methods formed different types of COPs depending on storage period before re-heating. The high amount (p<0.05) of 25-hydroxycholesterol or ${\alpha}-epoxide$ was detected in meat samples reheated by steaming or microwaving at 3 or 6 d of storage after steamed cooking, respectively. As a result, the combination of steaming and re-heating with microwaving could increase the total amount of COPs in chicken thigh meat and different cooking/re-heating methods could form different types of COPs, even though no significant difference in the total amount of COPs depending on storage period.